Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039756 Camellia sinensis var. sinensis HOM05D004148 ORTHO05D004709 3.5e-233 811.2 404 100.0
CSS0039701 Camellia sinensis var. sinensis HOM05D004148 ORTHO05D004709 1.8e-229 798.9 424 95.0
Rhsim13G0199700 Rhododendron simsii HOM05D004148 ORTHO05D004709 1.4e-157 560.1 470 65.1
Dinv32838 Davidia involucrata HOM05D004148 ORTHO05D004709 1.3e-155 553.5 467 65.1
Actinidia12896 Actinidia chinensis HOM05D001400 ORTHO05D001795 7.3e-146 521.2 461 63.1
Haze_23628 Corylus avellana HOM05D004148 ORTHO05D004709 1.2e-143 513.8 467 60.8
Cfa010235 Carpinus fangiana HOM05D004148 ORTHO05D004709 1.5e-143 513.5 469 60.3
Prupe.6G151400 Prunus persica HOM05D004148 ORTHO05D004709 1.7e-139 500.0 453 60.7
Lj2A891G11 Lonicera japonica HOM05D004148 ORTHO05D004709 1.6e-137 493.4 473 59.0
TAR623G1397 Trochodendron aralioides HOM05D004148 ORTHO05D004709 8.1e-137 491.1 468 58.3
MD03G1162400 Malus domestica HOM05D004148 ORTHO05D004709 1.8e-136 490.0 453 59.4
Atru.chr3.3014 Acer truncatum HOM05D004148 ORTHO05D004709 2.4e-136 489.6 466 57.7
GSVIVG01022379001 Vitis vinifera HOM05D004148 ORTHO05D004709 1.9e-133 479.9 455 58.2
Thecc.09G266000 Theobroma cacao HOM05D004148 ORTHO05D004709 1.2e-132 477.2 472 57.0
Gorai.009G080700 Gossypium raimondii HOM05D004148 ORTHO05D004709 7.8e-132 474.6 473 56.4
Ciclev10027694m.g Citrus clementina HOM05D004148 ORTHO05D004709 1.7e-131 473.4 453 58.3
Gohir.D05G079200 Gossypium hirsutum HOM05D004148 ORTHO05D004709 2.3e-131 473.0 473 56.2
MD11G1178600 Malus domestica HOM05D004148 ORTHO05D004709 3.0e-131 472.6 453 58.9
Nn2g14486 Nelumbo nucifera HOM05D004148 ORTHO05D004709 5.1e-131 471.9 478 55.6
Gohir.A05G076400 Gossypium hirsutum HOM05D004148 ORTHO05D004709 8.6e-131 471.1 477 56.8
QL01p018674 Quercus lobata HOM05D004148 ORTHO05D004709 7.3e-130 468.0 458 57.6
RcHm_v2.0_Chr5g0049541 Rosa chinensis HOM05D004148 ORTHO05D004709 1.4e-128 463.8 450 58.2
FAN12G2472 Fragaria x ananassa HOM05D004148 ORTHO05D004709 4.4e-127 458.8 445 58.2
FvH4_4g33990 Fragaria vesca HOM05D004148 ORTHO05D004709 1.3e-126 457.2 445 58.2
FAN17G2621 Fragaria x ananassa HOM05D004148 ORTHO05D004709 1.3e-126 457.2 445 58.0
CANSAT54G2785 Cannabis sativa HOM05D004148 ORTHO05D004709 3.8e-126 455.7 469 56.3
FAN22G0787 Fragaria x ananassa HOM05D004148 ORTHO05D004709 1.1e-125 454.1 445 57.8
TWI60G0836 Tripterygium wilfordii HOM05D004148 ORTHO05D004709 9.6e-122 441.0 472 53.4
Hma1.2p1_0218F.1_g092390 Hydrangea macrophylla HOM05D004148 ORTHO05D004709 6.2e-121 438.3 622 45.7
Lsat_1_v5_gn_5_75780 Lactuca sativa HOM05D004148 ORTHO05D004709 2.6e-119 433.0 444 55.4
ClCG05G010880 Citrullus lanatus HOM05D004148 ORTHO05D004709 2.2e-118 429.9 476 51.7
MELO3C020298.2 Cucumis melo HOM05D004148 ORTHO05D004709 2.9e-118 429.5 473 51.2
CsaV3_3G017640 Cucumis sativus L. HOM05D004148 ORTHO05D004709 2.9e-118 429.5 473 51.2
PGR102G2778 Punica granatum HOM05D004148 ORTHO05D004709 3.8e-118 429.1 473 52.0
VMungo1215G0285 Vigna mungo HOM05D004148 ORTHO05D004709 3.8e-118 429.1 467 51.0
Potri.009G153300 Populus trichocarpa HOM05D004148 ORTHO05D004709 6.4e-118 428.3 454 55.3
Sed0012220 Sechium edule HOM05D004148 ORTHO05D004709 1.4e-117 427.2 474 50.8
PSO339G2294 Papaver somniferum HOM05D004148 ORTHO05D004709 2.4e-117 426.4 478 51.7
EL10Ac7g16248 Beta vulgaris HOM05D004148 ORTHO05D004709 6.0e-116 421.8 475 51.8
HanXRQChr03g0089821 Helianthus annuus HOM05D004148 ORTHO05D004709 7.9e-116 421.4 457 51.9
Cpa.g.sc103.97 Carica papaya HOM05D004148 ORTHO05D004709 1.0e-115 421.0 467 52.9
arahy.Tifrunner.gnm1.ann1.SF9HJV Arachis hypogaea HOM05D004148 ORTHO05D004709 1.3e-115 420.6 461 50.8
AUR62020189 Chenopodium quinoa HOM05D004148 ORTHO05D004709 3.0e-115 419.5 473 49.7
PSO384G5014 Papaver somniferum HOM05D004148 ORTHO05D004709 3.9e-115 419.1 478 51.0
Cc00_g06190 Coffea canephora HOM05D004148 ORTHO05D004709 4.3e-114 415.6 457 51.9
Lj1g0011831 Lotus japonicus HOM05D004148 ORTHO05D004709 4.3e-114 415.6 456 52.4
Ah.15g099170 Amaranthus hybridus HOM05D004148 ORTHO05D004709 1.6e-113 413.7 471 49.9
Phvul.002G053700 Phaseolus vulgaris HOM05D004148 ORTHO05D004709 6.2e-113 411.8 465 49.7
Hund18819 Selenicereus undatus HOM05D004148 ORTHO05D004709 2.4e-112 409.8 468 49.6
Nitab4.5_0000615g0090 Nicotiana tabacum HOM05D004148 ORTHO05D004709 7.6e-111 404.8 456 49.1
Eucgr.B03795 Eucalyptus grandis HOM05D004148 ORTHO05D004709 3.8e-110 402.5 476 48.7
Nitab4.5_0005222g0040 Nicotiana tabacum HOM05D004148 ORTHO05D004709 4.9e-110 402.1 457 49.5
Sc06g0008560 Simmondsia chinensis HOM05D004148 ORTHO05D004709 4.9e-110 402.1 474 48.5
Aqoxy1G00551 Aquilegia oxysepala HOM05D004148 ORTHO05D004709 1.1e-109 401.0 458 48.9
Glyma.01G244400 Glycine max HOM05D004148 ORTHO05D004709 1.9e-109 400.2 442 52.0
Oeu048810.1 Olea europaea HOM05D004148 ORTHO05D004709 2.7e-108 396.4 449 51.0
Solyc11g071570.3 Solanum lycopersicum HOM05D004148 ORTHO05D004709 3.5e-108 396.0 455 50.1
Migut.D00721 Erythranthe guttata HOM05D004148 ORTHO05D004709 1.3e-107 394.0 458 49.6
Sopen11g029250 Solanum pennellii HOM05D004148 ORTHO05D004709 1.8e-107 393.7 456 49.6
CARHR108980 Cardamine hirsuta HOM05D004148 ORTHO05D004709 2.3e-107 393.3 451 49.7
Peaxi162Scf00217g00627 Petunia axillaris HOM05D004148 ORTHO05D004709 2.8e-105 386.3 454 49.3
CAN.G439.18 Capsicum annuum HOM05D004148 ORTHO05D004709 6.2e-105 385.2 455 49.2
ECA233G2337 Erigeron canadensis HOM05D004148 ORTHO05D004709 2.4e-104 383.3 471 50.1
THA.LOC104815063 Tarenaya hassleriana HOM05D004148 ORTHO05D004709 2.4e-104 383.3 477 48.2
BcaC01g02217 Brassica carinata HOM05D004148 ORTHO05D004709 2.9e-102 376.3 450 49.1
BolSC21t60233H Brassica oleracea HOM05D004148 ORTHO05D004709 2.5e-101 373.2 450 48.7
Psat4g228400 Pisum sativum HOM05D004148 ORTHO05D004709 2.5e-101 373.2 442 49.5
MSTRG.21311 Avicennia marina HOM05D004148 ORTHO05D004709 9.3e-101 371.3 449 48.6
BcaB02g10777 Brassica carinata HOM05D004148 ORTHO05D004709 2.7e-100 369.8 454 48.9
SalBow6G3333 Salvia bowleyana HOM05D004148 ORTHO05D004709 3.5e-100 369.4 459 49.2
Aa31LG4G13420 Aethionema arabicum HOM05D004148 ORTHO05D004709 2.3e-99 366.7 475 46.3
AT3G43610 Arabidopsis thaliana HOM05D004148 ORTHO05D004709 2.3e-99 366.7 454 47.8
Carub.0005s0948 Capsella rubella HOM05D004148 ORTHO05D004709 2.3e-99 366.7 461 47.9
AL5G21540 Arabidopsis lyrata HOM05D004148 ORTHO05D004709 3.0e-99 366.3 465 47.5
Sp5g17550 Schrenkiella parvula HOM05D004148 ORTHO05D004709 3.0e-99 366.3 469 46.3
Thhalv10002374m.g Eutrema salsugineum HOM05D004148 ORTHO05D004709 1.6e-97 360.5 455 46.8
BolC3t19498H Brassica oleracea HOM05D004148 ORTHO05D004709 1.8e-96 357.1 449 47.4
C03p72000 Brassica napus HOM05D004148 ORTHO05D004709 3.1e-96 356.3 467 46.7
A06p19850 Brassica napus HOM05D004148 ORTHO05D004709 4.1e-96 355.9 466 45.7
BraA06t25067Z Brassica rapa HOM05D004148 ORTHO05D004709 5.3e-96 355.5 453 47.5
BcaC01g01775 Brassica carinata HOM05D004148 ORTHO05D004709 6.9e-96 355.1 467 46.5
Medtr5g004880 Medicago truncatula HOM05D004148 ORTHO05D004709 2.7e-92 343.2 437 48.7
Hma1.2p1_2711F.1_g327330 Hydrangea macrophylla HOM05D004148 ORTHO05D004709 8.8e-91 338.2 436 47.0
arahy.Tifrunner.gnm1.ann1.J94639 Arachis hypogaea HOM05D004148 ORTHO05D004709 1.1e-88 331.3 439 45.3
ATR0697G020 Amborella trichopoda HOM05D004148 ORTHO05D004709 6.9e-88 328.6 510 40.8
SGA_v2.0_scaffold29G12109 Striga asiatica HOM05D004148 ORTHO05D004709 6.9e-88 328.6 489 43.4
DCAR_012264 Daucus carota HOM05D000495 ORTHO05D000357 3.8e-86 322.8 405 50.4
Lalb_Chr16g0376251 Lupinus albus HOM05D004148 ORTHO05D004709 5.0e-86 322.4 430 45.8
HPP92_019532 Vanilla planifolia HOM05D004148 ORTHO05D004709 8.5e-86 321.6 465 43.0
CDE07G1769 Ceratophyllum demersum HOM05D004148 ORTHO05D004709 5.5e-85 318.9 454 44.7
vmacro04063 Vaccinium macrocarpon HOM05D004148 ORTHO05D004709 1.8e-80 303.9 315 57.8
Zm00001eb073760 Zea mays HOM05D004148 ORTHO05D004709 3.1e-80 303.1 465 39.8
MBI11_g07705_MAGBIO Magnolia biondii HOM05D004148 ORTHO05D004709 1.2e-79 301.2 382 47.9
BcaB01g00875 Brassica carinata HOM05D004148 ORTHO05D004709 9.1e-64 248.4 307 46.9
COL.COLO4_25330 Corchorus olitorius HOM05D004148 ORTHO05D004709 5.9e-63 245.7 297 50.8
FvH4_3g27031 Fragaria vesca HOM05D004148 ORTHO05D004709 3.2e-61 240.0 260 50.4
Duzib168G1551 Durio zibethinus HOM05D004148 ORTHO05D004709 2.3e-59 233.8 179 63.1
Manes.04G054800 Manihot esculenta HOM05D004148 ORTHO05D004709 1.4e-56 224.6 179 63.1
Ca_24340_v3 Cicer arietinum L. HOM05D004148 ORTHO05D004709 2.3e-54 217.2 175 62.3
A06p26680 Brassica napus HOM05D004148 ORTHO05D004709 3.6e-52 209.9 197 53.3
Carub.0005s0934 Capsella rubella HOM05D004148 ORTHO05D004709 4.7e-52 209.5 307 46.3
unitig_21.g20312 Utricularia gibba HOM05D004148 ORTHO05D004709 2.6e-50 203.8 292 45.5
FAN16G3212 Fragaria x ananassa HOM05D004148 ORTHO05D004709 1.2e-42 178.3 339 37.8
Os04g0566900 Oryza sativa ssp. japonica HOM05D004148 ORTHO05D004709 6.4e-41 172.6 288 40.3
SHI25295 Sapria himalayana HOM05D004148 ORTHO05D004709 1.1e-40 171.8 179 47.5
Mapoly0099s0003 Marchantia polymorpha HOM05D004148 ORTHO05D004709 7.8e-39 165.6 491 29.3
vmacro04062 Vaccinium macrocarpon HOM05D004148 ORTHO05D004709 1.7e-33 147.9 105 71.4
SHI25296 Sapria himalayana HOM05D004148 ORTHO05D004709 6.4e-33 146.0 217 47.0
AagrBONN_evm.TU.Sc2ySwM_228.375 Anthoceros agrestis HOM05D004148 ORTHO05D004709 7.8e-31 139.0 466 28.5
BolC8t48007H Brassica oleracea HOM05D004148 ORTHO05D004709 3.0e-30 137.1 179 49.2
Psat6g175800 Pisum sativum HOM05D004148 ORTHO05D004709 2.1e-28 131.0 131 50.4
Pp3c11_24620 Physcomitrium patens HOM05D004148 ORTHO05D004709 2.8e-28 130.6 256 33.2
SEGI_18042 Sequoiadendron giganteum HOM05D004148 ORTHO05D004709 1.4e-27 128.3 191 39.3
Zm00001eb428880 Zea mays HOM05D004148 ORTHO05D004709 1.2e-26 125.2 428 25.9
SEGI_35526 Sequoiadendron giganteum HOM05D004148 ORTHO05D004709 1.6e-23 114.8 279 34.1
CBR_g23077 Chara braunii HOM05D004148 ORTHO05D004709 3.0e-22 110.5 154 42.2
C05p34090 Brassica napus HOM05D004148 ORTHO05D004709 3.9e-22 110.2 121 53.7
BraA06t25600Z Brassica rapa HOM05D004148 ORTHO05D004709 4.3e-21 106.7 96 57.3
Psat6g091080 Pisum sativum HOM05D004333 ORTHO05D005363 2.4e-19 100.9 104 51.0
A08p06640 Brassica napus HOM05D004148 ORTHO05D004709 1.2e-18 98.6 117 51.3
BraA07t28462Z Brassica rapa HOM05D004148 ORTHO05D004709 9.9e-18 95.5 116 51.7
BraA05t21194Z Brassica rapa HOM05D004148 ORTHO05D004709 1.1e-13 82.0 117 47.9
A08p03240 Brassica napus HOM05D004148 ORTHO05D004709 2.5e-13 80.9 116 45.7
A09p33570 Brassica napus HOM05D004148 ORTHO05D004709 2.8e-12 77.4 114 44.7
A10p16420 Brassica napus HOM05D004148 ORTHO05D004709 2.8e-12 77.4 114 44.7
C06p15540 Brassica napus HOM05D004148 ORTHO05D004709 2.8e-12 77.4 114 44.7
C08p23060 Brassica napus HOM05D004148 ORTHO05D004709 2.8e-12 77.4 114 44.7
CARHR148440 Cardamine hirsuta HOM05D004148 ORTHO05D004709 6.2e-12 76.3 119 42.9
A05p23300 Brassica napus HOM05D004148 ORTHO05D004709 2.0e-10 71.2 116 42.2
AL6G28480 Arabidopsis lyrata HOM05D005083 ORTHO05D006310 6.6e-06 56.2 374 23.8
EL10Ac4g10018 Beta vulgaris HOM05D005083 ORTHO05D006310 6.6e-06 56.2 326 25.5

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (2 genes)
Brassica carinata (4 genes)
Brassica napus (11 genes)
Brassica oleracea (3 genes)
Brassica rapa (4 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (2 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (2 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (1 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (4 genes)
Glycine max (1 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (3 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (0 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (2 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (0 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings