Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038691 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 6.7e-95 351.3 272 100.0
CSS0041689 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 9.8e-78 294.3 156 92.3
CSS0045249 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 3.1e-76 289.3 156 89.7
CSS0023448 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 2.3e-66 256.5 155 80.0
CSS0043933 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 2.0e-51 206.8 160 63.1
CSS0017543 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 1.1e-49 201.1 156 62.8
CSS0019933 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 6.2e-48 195.3 148 65.5
CSS0020511 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 2.6e-46 189.9 159 60.4
CSS0021727 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 1.2e-43 181.0 156 62.2
CSS0044261 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 7.8e-43 178.3 163 59.5
CSS0024032 Camellia sinensis var. sinensis HOM05D000522 ORTHO05D000565 5.1e-42 175.6 163 59.5
CSS0017779 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 1.5e-25 120.9 96 57.3
vmacro21029 Vaccinium macrocarpon HOM05D001320 ORTHO05D002136 2.7e-11 73.6 114 36.8
FAN25G3366 Fragaria x ananassa HOM05D016656 ORTHO05D015012 1.5e-09 67.8 118 35.6
FvH4_3g26742 Fragaria vesca HOM05D016656 ORTHO05D003639 4.3e-09 66.2 118 35.6
RcHm_v2.0_Chr2g0142701 Rosa chinensis HOM05D008702 ORTHO05D003639 8.1e-08 62.0 99 33.3
Nitab4.5_0000663g0010 Nicotiana tabacum HOM05D008778 ORTHO05D003639 2.4e-07 60.5 107 35.5
Nitab4.5_0001698g0040 Nicotiana tabacum HOM05D008778 ORTHO05D003639 2.4e-07 60.5 107 34.6
Sopen09g003890 Solanum pennellii HOM05D000006 ORTHO05D000001 2.4e-07 60.5 129 30.2
FAN21G3222 Fragaria x ananassa HOM05D016656 ORTHO05D015012 3.1e-07 60.1 117 35.0
Nitab4.5_0006587g0010 Nicotiana tabacum HOM05D008778 ORTHO05D003639 3.1e-07 60.1 103 29.1
Peaxi162Scf00169g01112 Petunia axillaris HOM05D008778 ORTHO05D003639 3.1e-07 60.1 107 32.7
CSS0044889 Camellia sinensis var. sinensis HOM05D008778 ORTHO05D003639 5.3e-07 59.3 155 31.6
vmacro08872 Vaccinium macrocarpon HOM05D000177 ORTHO05D004733 5.3e-07 59.3 111 34.2
RcHm_v2.0_Chr5g0049171 Rosa chinensis HOM05D016656 ORTHO05D003639 6.9e-07 58.9 107 37.4
CSS0041949 Camellia sinensis var. sinensis HOM05D012914 ORTHO05D003639 1.2e-06 58.2 166 31.3
PGSC0003DMG400002681 Solanum tuberosum HOM05D008778 ORTHO05D003639 1.5e-06 57.8 109 30.3
Nitab4.5_0001698g0060 Nicotiana tabacum HOM05D008778 ORTHO05D003639 2.0e-06 57.4 103 28.2
Solyc05g010817.1 Solanum lycopersicum HOM05D008778 ORTHO05D003639 2.0e-06 57.4 103 31.1
Sopen00g002430 Solanum pennellii HOM05D008778 ORTHO05D003639 2.6e-06 57.0 103 31.1
Sopen00g007290 Solanum pennellii HOM05D008778 ORTHO05D003639 2.6e-06 57.0 103 31.1
Sopen09g003880 Solanum pennellii HOM05D008778 ORTHO05D003639 2.6e-06 57.0 106 35.8
CSS0022979 Camellia sinensis var. sinensis HOM05D012914 ORTHO05D003639 1.0e-05 55.1 158 28.5

Acer truncatum (0 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (0 genes)
Avicennia marina (0 genes)
Beta vulgaris (0 genes)
Brassica carinata (0 genes)
Brassica napus (0 genes)
Brassica oleracea (0 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (15 genes)
Cannabis sativa (0 genes)
Capsella rubella (0 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (0 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (0 genes)
Citrus clementina (0 genes)
Coffea canephora (0 genes)
Corchorus olitorius (0 genes)
Corylus avellana (0 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (0 genes)
Daucus carota (0 genes)
Davidia involucrata (0 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (0 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (2 genes)
Glycine max (0 genes)
Gossypium hirsutum (0 genes)
Gossypium raimondii (0 genes)
Helianthus annuus (0 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (0 genes)
Lonicera japonica (0 genes)
Lotus japonicus (0 genes)
Lupinus albus (0 genes)
Magnolia biondii (0 genes)
Malus domestica (0 genes)
Manihot esculenta (0 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (4 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (0 genes)
Populus trichocarpa (0 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (0 genes)
Punica granatum (0 genes)
Quercus lobata (0 genes)
Rhododendron simsii (0 genes)
Rosa chinensis (2 genes)
Salix brachista (0 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (0 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (4 genes)
Solanum tuberosum (1 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (0 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (0 genes)
Zea mays (0 genes)

Program Settings