Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038394 Camellia sinensis var. sinensis HOM05D000240 ORTHO05D002608 4.8e-132 474.6 247 100.0
CSS0017071 Camellia sinensis var. sinensis HOM05D000240 ORTHO05D002608 1.3e-124 449.9 248 96.4
CSS0036916 Camellia sinensis var. sinensis HOM05D000240 ORTHO05D002608 1.8e-107 392.9 224 94.6
Actinidia09265 Actinidia chinensis HOM05D000240 ORTHO05D002608 3.6e-79 298.9 224 75.4
Dinv09474 Davidia involucrata HOM05D000240 ORTHO05D002608 2.7e-74 282.7 223 69.5
Rhsim08G0184500 Rhododendron simsii HOM05D000240 ORTHO05D002608 5.4e-67 258.5 224 67.4
QL07p009794 Quercus lobata HOM05D000240 ORTHO05D002608 2.8e-63 246.1 230 63.0
Cfa020015 Carpinus fangiana HOM05D000240 ORTHO05D002608 1.3e-60 237.3 229 58.5
CiPaw.09G046800 Carya illinoinensis HOM05D000240 ORTHO05D002608 1.4e-59 233.8 229 60.3
Manes.12G155600 Manihot esculenta HOM05D000240 ORTHO05D002608 7.1e-59 231.5 229 57.6
MD14G1085100 Malus domestica HOM05D000240 ORTHO05D002608 1.5e-56 223.8 225 60.4
Prupe.7G041000 Prunus persica HOM05D000240 ORTHO05D002608 9.5e-56 221.1 226 59.7
TAR633G0479 Trochodendron aralioides HOM05D000240 ORTHO05D002608 9.5e-56 221.1 221 60.6
Duzib106G0433 Durio zibethinus HOM05D000240 ORTHO05D002608 2.1e-55 219.9 225 60.0
Thecc.05G137000 Theobroma cacao HOM05D000240 ORTHO05D002608 8.1e-55 218.0 225 59.1
RcHm_v2.0_Chr1g0323861 Rosa chinensis HOM05D000240 ORTHO05D002608 6.8e-54 214.9 227 60.8
GSVIVG01033614001 Vitis vinifera HOM05D000240 ORTHO05D002608 6.8e-54 214.9 220 57.3
Gohir.A11G307601 Gossypium hirsutum HOM05D000240 ORTHO05D002608 2.6e-53 213.0 225 57.3
Gorai.007G353100 Gossypium raimondii HOM05D000240 ORTHO05D002608 3.4e-53 212.6 225 56.9
Gohir.D11G323100 Gossypium hirsutum HOM05D000240 ORTHO05D002608 1.3e-52 210.7 225 56.4
Haze_16236 Corylus avellana HOM05D000240 ORTHO05D002608 4.9e-52 208.8 229 53.7
DCAR_006071 Daucus carota HOM05D000240 ORTHO05D002608 6.4e-52 208.4 216 58.3
Nitab4.5_0002208g0050 Nicotiana tabacum HOM05D000240 ORTHO05D002608 2.4e-51 206.5 219 57.5
ClCG10G016160 Citrullus lanatus HOM05D000240 ORTHO05D002608 4.1e-51 205.7 226 55.8
FvH4_7g02901 Fragaria vesca HOM05D000240 ORTHO05D002608 1.6e-50 203.8 219 59.4
FAN06G4340 Fragaria x ananassa HOM05D000240 ORTHO05D002608 1.6e-50 203.8 219 59.4
FAN03G2757 Fragaria x ananassa HOM05D000240 ORTHO05D002608 4.6e-50 202.2 219 58.9
Glyma.17G208400 Glycine max HOM05D000240 ORTHO05D002608 1.0e-49 201.1 231 52.8
Potri.006G040700 Populus trichocarpa HOM05D000240 ORTHO05D002608 1.0e-49 201.1 206 56.8
MELO3C009763.2 Cucumis melo HOM05D000240 ORTHO05D002608 5.1e-49 198.7 227 54.6
Phvul.001G052600 Phaseolus vulgaris HOM05D000240 ORTHO05D002608 1.9e-48 196.8 221 52.9
CAN.G1280.50 Capsicum annuum HOM05D000127 ORTHO05D002608 3.3e-48 196.1 216 55.1
Sabra06G0027600 Salix brachista HOM05D000240 ORTHO05D002608 7.3e-48 194.9 205 57.1
CsaV3_3G040260 Cucumis sativus L. HOM05D000240 ORTHO05D002608 9.6e-48 194.5 227 53.3
Lj2A398T48 Lonicera japonica HOM05D000240 ORTHO05D002608 1.2e-47 194.1 194 60.3
Lalb_Chr21g0316681 Lupinus albus HOM05D000240 ORTHO05D002608 1.2e-47 194.1 222 54.5
Lj5g0004487 Lotus japonicus HOM05D000240 ORTHO05D002608 4.7e-47 192.2 243 49.8
FAN28G2091 Fragaria x ananassa HOM05D000240 ORTHO05D002608 1.1e-46 191.0 217 56.7
Sed0010747 Sechium edule HOM05D000240 ORTHO05D002608 1.8e-46 190.3 224 54.0
CANSAT64G1418 Cannabis sativa HOM05D000240 ORTHO05D002608 4.0e-46 189.1 219 53.0
MSTRG.6373 Avicennia marina HOM05D000240 ORTHO05D002608 6.8e-46 188.3 219 51.6
Atru.chr12.1237 Acer truncatum HOM05D000240 ORTHO05D002608 2.6e-45 186.4 216 52.8
Sopen04g016330 Solanum pennellii HOM05D000240 ORTHO05D002608 3.4e-45 186.0 219 53.0
Solyc04g040110.3 Solanum lycopersicum HOM05D000240 ORTHO05D002608 9.9e-45 184.5 219 52.5
TWI77G1020 Tripterygium wilfordii HOM05D000240 ORTHO05D002608 1.1e-43 181.0 201 54.2
Thhalv10019913m.g Eutrema salsugineum HOM05D000240 ORTHO05D002608 2.4e-43 179.9 225 48.9
Nitab4.5_0002162g0030 Nicotiana tabacum HOM05D000240 ORTHO05D002608 4.2e-43 179.1 219 53.0
Nn7g36671 Nelumbo nucifera HOM05D000240 ORTHO05D002608 3.5e-42 176.0 218 49.1
Sp3g08460 Schrenkiella parvula HOM05D000240 ORTHO05D002608 3.5e-42 176.0 226 47.8
Migut.J01665 Erythranthe guttata HOM05D000240 ORTHO05D002608 7.8e-42 174.9 220 50.5
Cc00_g02390 Coffea canephora HOM05D000240 ORTHO05D002608 1.7e-41 173.7 192 58.9
BcaC01g04262 Brassica carinata HOM05D000240 ORTHO05D002608 6.6e-41 171.8 226 48.7
AL3G21510 Arabidopsis lyrata HOM05D000240 ORTHO05D002608 2.5e-40 169.9 222 47.7
AT3G10180 Arabidopsis thaliana HOM05D000240 ORTHO05D002608 8.1e-39 164.9 222 46.4
Lsat_1_v5_gn_6_79340 Lactuca sativa HOM05D000240 ORTHO05D002608 1.1e-38 164.5 219 51.1
SalBow6G3141 Salvia bowleyana HOM05D000240 ORTHO05D002608 1.1e-38 164.5 226 48.7
A03p35680 Brassica napus HOM05D000240 ORTHO05D002608 2.4e-38 163.3 234 47.0
arahy.Tifrunner.gnm1.ann1.CVH2M9 Arachis hypogaea HOM05D000240 ORTHO05D002608 3.1e-38 162.9 217 47.5
BraA03t12743Z Brassica rapa HOM05D000240 ORTHO05D002608 5.3e-38 162.2 234 47.0
PGR031G0545 Punica granatum HOM05D000240 ORTHO05D002608 5.3e-38 162.2 222 46.8
Oeu059363.3 Olea europaea HOM05D000240 ORTHO05D002608 6.9e-38 161.8 198 53.5
BolC3t16603H Brassica oleracea HOM05D000240 ORTHO05D002608 1.5e-37 160.6 234 46.2
C03p43330 Brassica napus HOM05D000240 ORTHO05D002608 3.4e-37 159.5 234 46.2
Aqoxy1G00453 Aquilegia oxysepala HOM05D000240 ORTHO05D002608 2.2e-36 156.8 226 45.6
arahy.Tifrunner.gnm1.ann1.5T4GGV Arachis hypogaea HOM05D000240 ORTHO05D002608 2.2e-36 156.8 217 45.6
BcaB03g11571 Brassica carinata HOM05D000240 ORTHO05D002608 2.2e-36 156.8 226 45.1
VMungo0647G0305 Vigna mungo HOM05D000240 ORTHO05D002608 4.9e-36 155.6 196 48.0
SGA_v2.0_scaffold105G30298 Striga asiatica HOM05D000240 ORTHO05D002608 5.4e-35 152.1 229 46.3
AUR62040836 Chenopodium quinoa HOM05D000240 ORTHO05D002608 9.3e-35 151.4 207 44.4
Aa31LG3G2730 Aethionema arabicum HOM05D000240 ORTHO05D002608 2.7e-34 149.8 242 45.0
COL.COLO4_08473 Corchorus olitorius HOM05D000240 ORTHO05D002608 2.7e-34 149.8 225 48.0
Sc13g0001240 Simmondsia chinensis HOM05D000240 ORTHO05D002608 6.0e-34 148.7 222 47.3
CARHR084660 Cardamine hirsuta HOM05D000240 ORTHO05D002608 1.7e-33 147.1 208 46.2
THA.LOC104816404 Tarenaya hassleriana HOM05D000240 ORTHO05D002608 8.7e-33 144.8 229 43.2
AUR62030350 Chenopodium quinoa HOM05D000240 ORTHO05D002608 4.3e-32 142.5 207 43.0
EL10Ac3g07197 Beta vulgaris HOM05D000240 ORTHO05D002608 1.1e-30 137.9 209 40.2
MBI14_g34249_MAGBIO Magnolia biondii HOM05D000240 ORTHO05D002608 2.6e-29 133.3 229 40.2
Medtr1g484960 Medicago truncatula HOM05D000240 ORTHO05D002608 3.4e-29 132.9 224 41.1
Ah.04g151070 Amaranthus hybridus HOM05D000240 ORTHO05D002608 7.6e-29 131.7 240 40.8
Hund19103 Selenicereus undatus HOM05D000240 ORTHO05D002608 8.4e-28 128.3 191 45.5
Ca_12048_v3 Cicer arietinum L. HOM05D000240 ORTHO05D002608 1.1e-27 127.9 209 42.6
ECA240G1295 Erigeron canadensis HOM05D000240 ORTHO05D002608 8.7e-25 118.2 203 40.9
FAN28G0852 Fragaria x ananassa HOM05D000240 ORTHO05D002608 1.9e-24 117.1 117 59.8
ATR0580G186 Amborella trichopoda HOM05D000240 ORTHO05D002608 3.1e-22 109.8 215 39.1
HanXRQChr13g0414111 Helianthus annuus HOM05D000240 ORTHO05D002608 4.0e-22 109.4 178 43.8
PSO384G4909 Papaver somniferum HOM05D000240 ORTHO05D002608 1.2e-18 97.8 224 40.6
TPR.G2588 Trifolium pratense HOM05D000240 ORTHO05D002608 3.0e-17 93.2 225 32.4
BraA10t45353Z Brassica rapa HOM05D000240 ORTHO05D002608 1.9e-16 90.5 189 36.5
Psat6g089440 Pisum sativum HOM05D000240 ORTHO05D002608 2.5e-16 90.1 226 32.3
Peaxi162Scf01010g00017 Petunia axillaris HOM05D000240 ORTHO05D002608 4.3e-16 89.4 143 45.5
HPP92_010739 Vanilla planifolia HOM05D000240 ORTHO05D002608 4.3e-16 89.4 172 38.4
Carub.0003s0933 Capsella rubella HOM05D000240 ORTHO05D002608 7.4e-16 88.6 89 57.3
Zm00001eb313020 Zea mays HOM05D000240 ORTHO05D002608 1.6e-15 87.4 205 34.6
MD12G1093000 Malus domestica HOM05D000240 ORTHO05D002608 2.8e-15 86.7 103 55.3
MBI14_g46138_MAGBIO Magnolia biondii HOM05D000240 ORTHO05D016689 5.3e-14 82.4 73 60.3
Ciclev10004865m.g Citrus clementina HOM05D000240 ORTHO05D002608 1.9e-11 73.9 66 57.6
SGA_v2.0_scaffold57G20198 Striga asiatica HOM05D000240 ORTHO05D002608 1.9e-11 73.9 142 39.4
Ciclev10006521m.g Citrus clementina HOM05D000240 ORTHO05D002608 2.5e-11 73.6 68 57.4
Cpa.g.sc5.185 Carica papaya HOM05D000240 ORTHO05D002608 2.1e-10 70.5 75 52.0
Oeu059334.1 Olea europaea HOM05D000240 ORTHO05D002608 3.5e-10 69.7 69 56.5
MD12G1093100 Malus domestica HOM05D000240 ORTHO05D002608 4.6e-10 69.3 76 50.0
SEGI_22073 Sequoiadendron giganteum HOM05D000240 ORTHO05D002608 1.1e-08 64.7 200 31.0
AL4G43360 Arabidopsis lyrata HOM05D000240 ORTHO05D002608 4.3e-08 62.8 117 42.7
FAN25G3688 Fragaria x ananassa HOM05D000240 ORTHO05D002608 7.4e-08 62.0 58 60.3

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (3 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (2 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (5 genes)
Glycine max (1 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (2 genes)
Malus domestica (3 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (1 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (0 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings