Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037508 Camellia sinensis var. sinensis HOM05D003518 ORTHO05D015542 3.8e-34 147.5 70 100.0
CSS0043694 Camellia sinensis var. sinensis HOM05D003518 ORTHO05D015542 1.1e-28 129.4 65 92.3
CSS0039859 Camellia sinensis var. sinensis HOM05D003518 ORTHO05D015542 2.6e-27 124.8 67 89.6
CSS0048282 Camellia sinensis var. sinensis HOM05D003518 ORTHO05D015542 6.5e-26 120.2 68 83.8
CSS0010985 Camellia sinensis var. sinensis HOM05D003518 ORTHO05D015542 4.8e-21 104.0 55 89.1
CSS0016703 Camellia sinensis var. sinensis HOM05D003518 ORTHO05D015542 8.2e-21 103.2 54 90.7
vmacro20980 Vaccinium macrocarpon HOM05D003518 ORTHO05D005164 9.1e-20 99.8 64 65.6
Dinv43741 Davidia involucrata HOM05D003518 ORTHO05D005164 1.1e-17 92.8 60 71.7
Dinv32408 Davidia involucrata HOM05D003518 ORTHO05D005164 1.9e-17 92.0 66 65.2
Rhsim07G0023000 Rhododendron simsii HOM05D003518 ORTHO05D005164 1.9e-17 92.0 61 63.9
Actinidia33452 Actinidia chinensis HOM05D003518 ORTHO05D005164 4.2e-17 90.9 63 65.1
Rhsim01G0160000 Rhododendron simsii HOM05D003518 ORTHO05D005164 2.1e-16 88.6 60 61.7
Potri.002G151800 Populus trichocarpa HOM05D003518 ORTHO05D005164 8.0e-16 86.7 60 63.3
Hma1.2p1_0132F.1_g060640 Hydrangea macrophylla HOM05D003518 ORTHO05D005164 1.8e-15 85.5 61 67.2
Duzib133G1143 Durio zibethinus HOM05D003518 ORTHO05D005164 6.7e-15 83.6 66 51.5
Atru.chr5.372 Acer truncatum HOM05D003518 ORTHO05D005164 8.8e-15 83.2 64 57.8
Cc02_g37010 Coffea canephora HOM05D003518 ORTHO05D005164 3.3e-14 81.3 61 57.4
FAN03G3110 Fragaria x ananassa HOM05D003518 ORTHO05D005164 3.3e-14 81.3 62 58.1
Prupe.2G151300 Prunus persica HOM05D003518 ORTHO05D005164 3.3e-14 81.3 61 55.7
RcHm_v2.0_Chr1g0351731 Rosa chinensis HOM05D003518 ORTHO05D005164 4.4e-14 80.9 60 61.7
Sabra02G0120000 Salix brachista HOM05D003518 ORTHO05D005164 5.7e-14 80.5 59 59.3
TWI59G1247 Tripterygium wilfordii HOM05D003518 ORTHO05D005164 5.7e-14 80.5 66 53.0
FvH4_7g12710 Fragaria vesca HOM05D003518 ORTHO05D005164 7.4e-14 80.1 60 60.0
FAN01G1761 Fragaria x ananassa HOM05D003518 ORTHO05D005164 7.4e-14 80.1 60 60.0
FAN06G1131 Fragaria x ananassa HOM05D003518 ORTHO05D005164 7.4e-14 80.1 60 60.0
FAN06G5121 Fragaria x ananassa HOM05D003518 ORTHO05D005164 7.4e-14 80.1 60 60.0
MD02G1197300 Malus domestica HOM05D003518 ORTHO05D005164 9.7e-14 79.7 61 54.1
GSVIVG01027580001 Vitis vinifera HOM05D003518 ORTHO05D005164 9.7e-14 79.7 58 58.6
CANSAT56G2265 Cannabis sativa HOM05D003518 ORTHO05D005164 1.3e-13 79.3 61 52.5
Manes.01G263400 Manihot esculenta HOM05D003518 ORTHO05D005164 1.3e-13 79.3 59 57.6
PGR042G3961 Punica granatum HOM05D003518 ORTHO05D005164 1.3e-13 79.3 67 52.2
Gohir.A12G102800 Gossypium hirsutum HOM05D003518 ORTHO05D005164 1.7e-13 79.0 60 53.3
FAN10G3707 Fragaria x ananassa HOM05D003518 ORTHO05D005164 2.8e-13 78.2 60 58.3
Potri.014G074300 Populus trichocarpa HOM05D003518 ORTHO05D005164 3.7e-13 77.8 60 55.0
FAN10G3827 Fragaria x ananassa HOM05D003518 ORTHO05D005164 4.8e-13 77.4 60 58.3
Gorai.008G115300 Gossypium raimondii HOM05D003518 ORTHO05D005164 4.8e-13 77.4 60 53.3
CiPaw.01G258000 Carya illinoinensis HOM05D003518 ORTHO05D005164 6.3e-13 77.0 62 51.6
Lsat_1_v5_gn_7_6740 Lactuca sativa HOM05D003518 ORTHO05D005164 6.3e-13 77.0 63 57.1
Oeu058604.1 Olea europaea HOM05D003518 ORTHO05D005164 6.3e-13 77.0 59 55.9
Lalb_Chr04g0256591 Lupinus albus HOM05D003518 ORTHO05D005164 1.1e-12 76.3 56 60.7
TWI14G0835 Tripterygium wilfordii HOM05D003518 ORTHO05D005164 1.4e-12 75.9 66 51.5
Ciclev10019439m.g Citrus clementina HOM05D003518 ORTHO05D005164 1.8e-12 75.5 61 50.8
Sabra14G0053000 Salix brachista HOM05D003518 ORTHO05D005164 1.8e-12 75.5 57 57.9
Lalb_Chr17g0340051 Lupinus albus HOM05D003518 ORTHO05D005164 2.4e-12 75.1 59 57.6
SGA_v2.0_scaffold153G37052 Striga asiatica HOM05D003518 ORTHO05D005164 5.3e-12 73.9 60 51.7
Medtr8g033180 Medicago truncatula HOM05D003518 ORTHO05D005164 7.0e-12 73.6 63 52.4
Ah.05g175810 Amaranthus hybridus HOM05D003518 ORTHO05D005164 9.1e-12 73.2 56 51.8
Duzib138G0903 Durio zibethinus HOM05D003518 ORTHO05D005164 9.1e-12 73.2 60 50.0
MD07G1123700 Malus domestica HOM05D003518 ORTHO05D005164 9.1e-12 73.2 61 49.2
DCAR_015924 Daucus carota HOM05D003518 ORTHO05D005164 1.2e-11 72.8 61 55.7
ECA236G3950 Erigeron canadensis HOM05D003518 ORTHO05D005164 1.2e-11 72.8 61 54.1
Eucgr.E01329 Eucalyptus grandis HOM05D003518 ORTHO05D005164 2.0e-11 72.0 58 55.2
Manes.05G041800 Manihot esculenta HOM05D003518 ORTHO05D005164 2.0e-11 72.0 58 51.7
PSO782G5439 Papaver somniferum HOM05D003518 ORTHO05D005164 2.6e-11 71.6 53 58.5
Haze_16711 Corylus avellana HOM05D003518 ORTHO05D005164 3.5e-11 71.2 66 47.0
SalBow7G3081 Salvia bowleyana HOM05D003518 ORTHO05D005164 3.5e-11 71.2 59 50.8
Glyma.07G080800 Glycine max HOM05D003518 ORTHO05D005164 4.5e-11 70.9 63 50.8
Aqoxy7G00493 Aquilegia oxysepala HOM05D003518 ORTHO05D005164 5.9e-11 70.5 66 47.0
DCAR_006891 Daucus carota HOM05D003518 ORTHO05D005164 5.9e-11 70.5 61 54.1
HanXRQChr04g0122151 Helianthus annuus HOM05D003518 ORTHO05D005164 5.9e-11 70.5 63 50.8
PSO478G4904 Papaver somniferum HOM05D003518 ORTHO05D005164 5.9e-11 70.5 53 58.5
Sc23g0003400 Simmondsia chinensis HOM05D003518 ORTHO05D005164 5.9e-11 70.5 54 55.6
THA.LOC104802006 Tarenaya hassleriana HOM05D003518 ORTHO05D005164 5.9e-11 70.5 61 47.5
CAN.G170.67 Capsicum annuum HOM05D003518 ORTHO05D005164 7.7e-11 70.1 59 52.5
HanXRQChr06g0169291 Helianthus annuus HOM05D003518 ORTHO05D005164 7.7e-11 70.1 63 50.8
Lj3g0010840 Lotus japonicus HOM05D003518 ORTHO05D005164 7.7e-11 70.1 59 47.5
CiPaw.02G164700 Carya illinoinensis HOM05D003518 ORTHO05D005164 1.0e-10 69.7 59 49.2
AUR62033382 Chenopodium quinoa HOM05D003518 ORTHO05D005164 1.0e-10 69.7 56 51.8
Gohir.D11G088000 Gossypium hirsutum HOM05D003518 ORTHO05D005164 1.0e-10 69.7 66 42.4
Gorai.007G093900 Gossypium raimondii HOM05D003518 ORTHO05D005164 1.0e-10 69.7 66 42.4
arahy.Tifrunner.gnm1.ann1.4HY23M Arachis hypogaea HOM05D003518 ORTHO05D005164 1.3e-10 69.3 58 51.7
EL10Ac1g00954 Beta vulgaris HOM05D003518 ORTHO05D005164 1.7e-10 68.9 56 51.8
QL08p051054 Quercus lobata HOM05D003518 ORTHO05D005164 1.7e-10 68.9 59 52.5
AUR62004275 Chenopodium quinoa HOM05D003518 ORTHO05D005164 2.2e-10 68.6 56 51.8
Ca_23782_v3 Cicer arietinum L. HOM05D003518 ORTHO05D005164 2.2e-10 68.6 63 47.6
MBI18_g40306_MAGBIO Magnolia biondii HOM05D003518 ORTHO05D015542 2.2e-10 68.6 62 51.6
Oeu024431.2 Olea europaea HOM05D003518 ORTHO05D005164 2.2e-10 68.6 61 54.1
Sopen01g037730 Solanum pennellii HOM05D003518 ORTHO05D005164 2.2e-10 68.6 59 52.5
Nn1g01294 Nelumbo nucifera HOM05D003518 ORTHO05D005164 3.8e-10 67.8 58 53.4
ECA234G2542 Erigeron canadensis HOM05D003518 ORTHO05D005164 5.0e-10 67.4 61 54.1
MBI11_g05096_MAGBIO Magnolia biondii HOM05D003518 ORTHO05D005164 5.0e-10 67.4 61 50.8
Solyc01g091950.4 Solanum lycopersicum HOM05D003518 ORTHO05D005164 5.0e-10 67.4 59 50.8
VMungo0331G0661 Vigna mungo HOM05D003518 ORTHO05D005164 5.0e-10 67.4 63 47.6
Sed0024132 Sechium edule HOM05D003518 ORTHO05D005164 6.5e-10 67.0 57 52.6
arahy.Tifrunner.gnm1.ann1.N1W82K Arachis hypogaea HOM05D003518 ORTHO05D005164 8.5e-10 66.6 58 50.0
Migut.B01669 Erythranthe guttata HOM05D003518 ORTHO05D005164 8.5e-10 66.6 58 43.1
A04p33950 Brassica napus HOM05D003518 ORTHO05D005164 1.1e-09 66.2 56 51.8
BraA04t18856Z Brassica rapa HOM05D003518 ORTHO05D005164 1.1e-09 66.2 56 51.8
Glyma.03G019200 Glycine max HOM05D003518 ORTHO05D005164 1.1e-09 66.2 63 47.6
A03p25290 Brassica napus HOM05D003518 ORTHO05D005164 1.5e-09 65.9 56 50.0
Nn6g34312 Nelumbo nucifera HOM05D003518 ORTHO05D005164 1.5e-09 65.9 61 49.2
Cpa.g.sc18.167 Carica papaya HOM05D003518 ORTHO05D005164 1.9e-09 65.5 59 44.1
BcaC01g05115 Brassica carinata HOM05D003518 ORTHO05D005164 3.2e-09 64.7 56 50.0
C03p30180 Brassica napus HOM05D003518 ORTHO05D005164 3.2e-09 64.7 56 50.0
HanXRQChr16g0523541 Helianthus annuus HOM05D003518 ORTHO05D005164 3.2e-09 64.7 62 46.8
Lsat_1_v5_gn_4_37220 Lactuca sativa HOM05D003518 ORTHO05D005164 4.2e-09 64.3 61 47.5
ClCG05G001980 Citrullus lanatus HOM05D003518 ORTHO05D005164 5.5e-09 63.9 57 52.6
MSTRG.20781 Avicennia marina HOM05D003518 ORTHO05D005164 7.2e-09 63.5 60 46.7
BraA03t11733Z Brassica rapa HOM05D003518 ORTHO05D005164 7.2e-09 63.5 56 48.2
arahy.Tifrunner.gnm1.ann1.I486B7 Arachis hypogaea HOM05D003518 ORTHO05D005164 9.4e-09 63.2 51 52.9
arahy.Tifrunner.gnm1.ann1.UCSC4W Arachis hypogaea HOM05D003518 ORTHO05D005164 9.4e-09 63.2 51 52.9
BcaB06g29432 Brassica carinata HOM05D003518 ORTHO05D005164 9.4e-09 63.2 56 50.0
BolC3t15366H Brassica oleracea HOM05D003518 ORTHO05D005164 9.4e-09 63.2 56 50.0
BcaB01g03262 Brassica carinata HOM05D003518 ORTHO05D005164 1.6e-08 62.4 53 49.1
CSS0013582 Camellia sinensis var. sinensis HOM05D003518 ORTHO05D015542 2.7e-08 61.6 38 76.3
Phvul.010G088200 Phaseolus vulgaris HOM05D003518 ORTHO05D005164 2.7e-08 61.6 60 48.3
CsaV3_3G009390 Cucumis sativus L. HOM05D003518 ORTHO05D005164 4.7e-08 60.8 57 49.1
AL4G44840 Arabidopsis lyrata HOM05D003518 ORTHO05D005164 8.0e-08 60.1 56 42.9
CARHR140890 Cardamine hirsuta HOM05D003518 ORTHO05D005164 8.0e-08 60.1 53 45.3
Aa31LG1G27140 Aethionema arabicum HOM05D003518 ORTHO05D005164 1.0e-07 59.7 55 41.8
BcaC02g07077 Brassica carinata HOM05D003518 ORTHO05D005164 1.0e-07 59.7 56 46.4
C04p71760 Brassica napus HOM05D003518 ORTHO05D005164 1.0e-07 59.7 56 46.4
MELO3C006158.2 Cucumis melo HOM05D003518 ORTHO05D005164 1.8e-07 58.9 57 47.4
Sp4g27710 Schrenkiella parvula HOM05D003518 ORTHO05D005164 2.3e-07 58.5 56 42.9
Thhalv10001388m.g Eutrema salsugineum HOM05D003518 ORTHO05D005164 4.0e-07 57.8 57 40.4
Carub.0004s2832 Capsella rubella HOM05D003518 ORTHO05D005164 5.2e-07 57.4 53 41.5
Sed0008201 Sechium edule HOM05D003518 ORTHO05D005164 5.2e-07 57.4 57 47.4
Nitab4.5_0003182g0050 Nicotiana tabacum HOM05D003518 ORTHO05D005164 2.0e-06 55.5 45 57.8
BolC4t28675H Brassica oleracea HOM05D003518 ORTHO05D005164 9.7e-06 53.1 56 42.9
Hund27333 Selenicereus undatus HOM05D003518 ORTHO05D005164 9.7e-06 53.1 55 45.5

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (4 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (7 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (0 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (2 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (6 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (3 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (2 genes)
Lonicera japonica (0 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (2 genes)
Malus domestica (2 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (1 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (2 genes)
Petunia axillaris (0 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (0 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (0 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (0 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (0 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (0 genes)

Program Settings