Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035154 Camellia sinensis var. sinensis HOM05D000240 ORTHO05D015017 6.0e-59 230.7 124 100.0
Actinidia09265 Actinidia chinensis HOM05D000240 ORTHO05D002608 3.9e-34 148.3 124 66.1
Dinv09475 Davidia involucrata HOM05D000240 ORTHO05D015017 6.3e-32 141.0 119 63.9
vmacro05230 Vaccinium macrocarpon HOM05D000240 ORTHO05D015017 1.2e-30 136.7 124 65.3
Rhsim08G0184500 Rhododendron simsii HOM05D000240 ORTHO05D002608 2.0e-30 136.0 124 63.7
Sed0010747 Sechium edule HOM05D000240 ORTHO05D002608 4.5e-30 134.8 120 64.2
Thecc.05G137000 Theobroma cacao HOM05D000240 ORTHO05D002608 1.1e-28 130.2 124 59.7
Hund19103 Selenicereus undatus HOM05D000240 ORTHO05D002608 2.3e-26 122.5 124 54.0
QL07p009810 Quercus lobata HOM05D000240 ORTHO05D002608 5.2e-26 121.3 118 59.3
CiPaw.09G046800 Carya illinoinensis HOM05D000240 ORTHO05D002608 8.8e-26 120.6 123 53.7
Potri.006G040700 Populus trichocarpa HOM05D000240 ORTHO05D002608 2.0e-25 119.4 101 63.4
Sabra06G0027600 Salix brachista HOM05D000240 ORTHO05D002608 2.0e-25 119.4 99 65.7
Duzib106G0433 Durio zibethinus HOM05D000240 ORTHO05D002608 2.6e-25 119.0 114 58.8
TWI77G1020 Tripterygium wilfordii HOM05D000240 ORTHO05D002608 2.6e-25 119.0 121 56.2
Ciclev10005818m.g Citrus clementina HOM05D000240 ORTHO05D015017 4.4e-25 118.2 124 55.6
Lalb_Chr21g0316681 Lupinus albus HOM05D000240 ORTHO05D002608 4.4e-25 118.2 124 54.0
Haze_16236 Corylus avellana HOM05D000240 ORTHO05D002608 9.7e-25 117.1 126 56.3
CsaV3_3G040260 Cucumis sativus L. HOM05D000240 ORTHO05D002608 9.7e-25 117.1 121 53.7
MELO3C009763.2 Cucumis melo HOM05D000240 ORTHO05D002608 1.1e-23 113.6 121 52.9
Atru.chr12.1237 Acer truncatum HOM05D000240 ORTHO05D002608 3.1e-23 112.1 123 52.0
Cfa020015 Carpinus fangiana HOM05D000240 ORTHO05D002608 4.1e-23 111.7 126 54.0
COL.COLO4_08473 Corchorus olitorius HOM05D000240 ORTHO05D002608 4.1e-23 111.7 97 64.9
EL10Ac3g07197 Beta vulgaris HOM05D000240 ORTHO05D002608 5.3e-23 111.3 121 54.5
AUR62040836 Chenopodium quinoa HOM05D000240 ORTHO05D002608 5.3e-23 111.3 123 54.5
TAR633G0479 Trochodendron aralioides HOM05D000240 ORTHO05D002608 1.2e-22 110.2 121 50.4
ClCG10G016160 Citrullus lanatus HOM05D000240 ORTHO05D002608 1.6e-22 109.8 119 51.3
Nn7g36671 Nelumbo nucifera HOM05D000240 ORTHO05D002608 1.6e-22 109.8 123 52.0
AUR62030350 Chenopodium quinoa HOM05D000240 ORTHO05D002608 2.7e-22 109.0 121 54.5
Cc00_g02410 Coffea canephora HOM05D000240 ORTHO05D002608 4.5e-22 108.2 107 59.8
Sc13g0001240 Simmondsia chinensis HOM05D000240 ORTHO05D002608 7.7e-22 107.5 119 53.8
Solyc04g040110.3 Solanum lycopersicum HOM05D000240 ORTHO05D002608 7.7e-22 107.5 100 60.0
Sopen04g016330 Solanum pennellii HOM05D000240 ORTHO05D002608 7.7e-22 107.5 100 60.0
GSVIVG01033614001 Vitis vinifera HOM05D000240 ORTHO05D002608 1.7e-21 106.3 100 62.0
Prupe.7G041000 Prunus persica HOM05D000240 ORTHO05D002608 2.9e-21 105.5 101 58.4
Ah.04g151070 Amaranthus hybridus HOM05D000240 ORTHO05D002608 3.8e-21 105.1 117 49.6
CAN.G1280.50 Capsicum annuum HOM05D000127 ORTHO05D002608 6.5e-21 104.4 93 61.3
Lj5g0004487 Lotus japonicus HOM05D000240 ORTHO05D002608 6.5e-21 104.4 124 50.8
Nitab4.5_0002208g0050 Nicotiana tabacum HOM05D000240 ORTHO05D002608 1.1e-20 103.6 121 50.4
CANSAT64G1418 Cannabis sativa HOM05D000240 ORTHO05D002608 1.2e-19 100.1 122 46.7
Nitab4.5_0002162g0030 Nicotiana tabacum HOM05D000240 ORTHO05D002608 1.2e-19 100.1 121 48.8
FAN03G2757 Fragaria x ananassa HOM05D000240 ORTHO05D002608 4.7e-19 98.2 119 52.9
MD14G1085100 Malus domestica HOM05D000240 ORTHO05D002608 4.7e-19 98.2 98 56.1
Medtr1g484960 Medicago truncatula HOM05D000240 ORTHO05D002608 4.7e-19 98.2 117 50.4
FAN28G2091 Fragaria x ananassa HOM05D000240 ORTHO05D002608 6.1e-19 97.8 119 52.1
PGR031G0545 Punica granatum HOM05D000240 ORTHO05D002608 1.0e-18 97.1 117 47.9
FAN06G4340 Fragaria x ananassa HOM05D000240 ORTHO05D002608 3.0e-18 95.5 119 51.3
DCAR_006071 Daucus carota HOM05D000240 ORTHO05D002608 6.8e-18 94.4 95 57.9
Peaxi162Scf01010g00017 Petunia axillaris HOM05D000240 ORTHO05D002608 6.8e-18 94.4 121 46.3
Psat6g089400 Pisum sativum HOM05D000240 ORTHO05D015017 8.8e-18 94.0 121 43.8
TPR.G2588 Trifolium pratense HOM05D000240 ORTHO05D002608 8.8e-18 94.0 102 52.0
VMungo0647G0327 Vigna mungo HOM05D000240 ORTHO05D015017 8.8e-18 94.0 119 47.9
Carub.0003s0933 Capsella rubella HOM05D000240 ORTHO05D002608 1.2e-17 93.6 100 54.0
FvH4_7g02901 Fragaria vesca HOM05D000240 ORTHO05D002608 1.5e-17 93.2 119 50.4
Glyma.17G208400 Glycine max HOM05D000240 ORTHO05D002608 4.4e-17 91.7 124 47.6
Phvul.001G052600 Phaseolus vulgaris HOM05D000240 ORTHO05D002608 9.8e-17 90.5 122 46.7
Lsat_1_v5_gn_6_79340 Lactuca sativa HOM05D000240 ORTHO05D002608 1.3e-16 90.1 117 49.6
THA.LOC104816404 Tarenaya hassleriana HOM05D000240 ORTHO05D002608 1.7e-16 89.7 94 54.3
Cpa.g.sc1212.3 Carica papaya HOM05D000240 ORTHO05D002608 2.2e-16 89.4 100 52.0
SGA_v2.0_scaffold105G30298 Striga asiatica HOM05D000240 ORTHO05D002608 2.2e-16 89.4 103 50.5
Gohir.A11G307601 Gossypium hirsutum HOM05D000240 ORTHO05D002608 4.8e-16 88.2 100 52.0
Gohir.D11G323100 Gossypium hirsutum HOM05D000240 ORTHO05D002608 1.1e-15 87.0 98 52.0
Gorai.007G353100 Gossypium raimondii HOM05D000240 ORTHO05D002608 1.1e-15 87.0 98 52.0
AT3G10180 Arabidopsis thaliana HOM05D000240 ORTHO05D002608 1.8e-15 86.3 92 51.1
ATR0580G186 Amborella trichopoda HOM05D000240 ORTHO05D002608 3.1e-15 85.5 97 52.6
COL.COLO4_07160 Corchorus olitorius HOM05D000240 ORTHO05D015017 4.1e-15 85.1 66 69.7
Migut.J01665 Erythranthe guttata HOM05D000240 ORTHO05D002608 7.0e-15 84.3 80 56.2
MBI14_g34249_MAGBIO Magnolia biondii HOM05D000240 ORTHO05D002608 7.0e-15 84.3 98 46.9
AL3G21510 Arabidopsis lyrata HOM05D000240 ORTHO05D002608 9.1e-15 84.0 93 53.8
FAN10G3808 Fragaria x ananassa HOM05D000240 ORTHO05D015017 9.1e-15 84.0 137 44.5
Manes.12G155600 Manihot esculenta HOM05D000240 ORTHO05D002608 3.5e-14 82.0 94 47.9
HanXRQChr13g0414111 Helianthus annuus HOM05D000240 ORTHO05D002608 4.5e-14 81.6 124 42.7
Lsat_1_v5_gn_7_4320 Lactuca sativa HOM05D000240 ORTHO05D015017 5.9e-14 81.3 95 48.4
A03p35680 Brassica napus HOM05D000240 ORTHO05D002608 1.0e-13 80.5 96 51.0
Sp3g08460 Schrenkiella parvula HOM05D000240 ORTHO05D002608 1.0e-13 80.5 92 53.3
BraA03t12743Z Brassica rapa HOM05D000240 ORTHO05D002608 2.2e-13 79.3 64 67.2
Aa31LG3G2730 Aethionema arabicum HOM05D000240 ORTHO05D002608 2.9e-13 79.0 110 44.5
RcHm_v2.0_Chr1g0323861 Rosa chinensis HOM05D000240 ORTHO05D002608 2.9e-13 79.0 119 43.7
BcaC01g04262 Brassica carinata HOM05D000240 ORTHO05D002608 3.8e-13 78.6 115 47.0
BcaB03g11571 Brassica carinata HOM05D000240 ORTHO05D002608 8.5e-13 77.4 90 51.1
CARHR084660 Cardamine hirsuta HOM05D000240 ORTHO05D002608 1.5e-12 76.6 96 50.0
BolC3t16603H Brassica oleracea HOM05D000240 ORTHO05D002608 1.9e-12 76.3 64 64.1
C03p43330 Brassica napus HOM05D000240 ORTHO05D002608 3.2e-12 75.5 112 46.4
Thhalv10019913m.g Eutrema salsugineum HOM05D000240 ORTHO05D002608 7.2e-12 74.3 87 52.9
ECA240G1295 Erigeron canadensis HOM05D000240 ORTHO05D002608 9.4e-12 73.9 121 38.8
Os09g0421166 Oryza sativa ssp. japonica HOM05D000240 ORTHO05D015017 9.4e-12 73.9 96 42.7
FAN28G0852 Fragaria x ananassa HOM05D000240 ORTHO05D002608 4.7e-11 71.6 134 38.1
Hma1.2p1_0595F.1_g186120 Hydrangea macrophylla HOM05D000240 ORTHO05D015017 4.7e-11 71.6 99 50.5
PSO384G4909 Papaver somniferum HOM05D000240 ORTHO05D002608 6.8e-10 67.8 79 45.6
CDE05G3239 Ceratophyllum demersum HOM05D000240 ORTHO05D015017 2.6e-09 65.9 110 36.4
Aqoxy1G00453 Aquilegia oxysepala HOM05D000240 ORTHO05D002608 7.5e-09 64.3 96 44.8
unitig_21.g20920 Utricularia gibba HOM05D000240 ORTHO05D002608 9.8e-09 63.9 64 53.1
MSTRG.6373 Avicennia marina HOM05D000240 ORTHO05D002608 7.0e-07 57.8 60 48.3
SalBow6G3141 Salvia bowleyana HOM05D000240 ORTHO05D002608 2.0e-06 56.2 61 49.2
SEGI_37658 Sequoiadendron giganteum HOM05D000240 ORTHO05D015017 5.9e-06 54.7 65 47.7

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (0 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (2 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (5 genes)
Glycine max (1 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (2 genes)
Lonicera japonica (0 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (1 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (0 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (0 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (0 genes)

Program Settings