Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033444 Camellia sinensis var. sinensis HOM05D003126 ORTHO05D005034 1.5e-257 892.5 487 100.0
CSS0008425 Camellia sinensis var. sinensis HOM05D003126 ORTHO05D005034 1.0e-255 886.3 484 99.8
Rhsim01G0130500 Rhododendron simsii HOM05D003126 ORTHO05D005034 1.4e-172 610.1 533 64.4
Actinidia21560 Actinidia chinensis HOM05D003126 ORTHO05D005034 5.1e-170 601.7 484 67.6
Actinidia20677 Actinidia chinensis HOM05D003126 ORTHO05D005034 2.8e-168 595.9 484 67.6
vmacro21181 Vaccinium macrocarpon HOM05D003126 ORTHO05D005034 1.4e-164 583.6 551 59.5
Dinv43458 Davidia involucrata HOM05D003126 ORTHO05D005034 3.4e-158 562.4 481 64.4
GSVIVG01032066001 Vitis vinifera HOM05D003126 ORTHO05D005034 7.9e-155 551.2 489 62.8
Hma1.2p1_0312F.1_g121420 Hydrangea macrophylla HOM05D003126 ORTHO05D005034 4.4e-153 545.4 484 61.4
Haze_03230 Corylus avellana HOM05D003126 ORTHO05D005034 6.1e-147 525.0 485 59.2
Dinv09367 Davidia involucrata HOM05D003126 ORTHO05D005034 1.0e-146 524.2 397 69.8
QL04p005483 Quercus lobata HOM05D003126 ORTHO05D005034 1.3e-144 517.3 485 58.6
TAR636G3316 Trochodendron aralioides HOM05D003126 ORTHO05D005034 9.1e-143 511.1 485 58.4
TAR633G1448 Trochodendron aralioides HOM05D003126 ORTHO05D005034 8.5e-141 504.6 476 59.2
RcHm_v2.0_Chr1g0314991 Rosa chinensis HOM05D003126 ORTHO05D005034 1.9e-140 503.4 474 58.4
Cfa010743 Carpinus fangiana HOM05D003126 ORTHO05D005034 4.2e-140 502.3 485 60.4
FAN03G0993 Fragaria x ananassa HOM05D003126 ORTHO05D005034 1.5e-137 493.8 474 57.0
FAN10G2088 Fragaria x ananassa HOM05D003126 ORTHO05D005034 8.2e-136 488.0 474 57.2
FvH4_7g00830 Fragaria vesca HOM05D003126 ORTHO05D005034 1.1e-135 487.6 474 57.2
FAN06G0385 Fragaria x ananassa HOM05D003126 ORTHO05D005034 1.1e-135 487.6 474 57.2
Thecc.01G412800 Theobroma cacao HOM05D003126 ORTHO05D005034 4.1e-135 485.7 477 56.6
CiPaw.13G003500 Carya illinoinensis HOM05D003126 ORTHO05D005034 2.7e-134 483.0 484 55.4
Duzib138G0006 Durio zibethinus HOM05D003126 ORTHO05D005034 2.2e-133 479.9 483 56.7
Potri.001G269200 Populus trichocarpa HOM05D003126 ORTHO05D005034 3.2e-132 476.1 484 54.8
Potri.009G063800 Populus trichocarpa HOM05D003126 ORTHO05D005034 8.0e-131 471.5 484 54.1
Prupe.2G010500 Prunus persica HOM05D003126 ORTHO05D005034 1.8e-130 470.3 476 55.9
MD07G1007800 Malus domestica HOM05D003126 ORTHO05D005034 5.2e-130 468.8 475 54.7
CANSAT80G2854 Cannabis sativa HOM05D003126 ORTHO05D005034 2.0e-129 466.8 486 55.6
Atru.chr11.2643 Acer truncatum HOM05D003126 ORTHO05D005034 3.4e-129 466.1 486 54.9
MD02G1314400 Malus domestica HOM05D003126 ORTHO05D005034 3.4e-129 466.1 474 55.1
Gohir.D08G038300 Gossypium hirsutum HOM05D003126 ORTHO05D005034 5.0e-125 452.2 486 54.1
Gohir.A08G027600 Gossypium hirsutum HOM05D003126 ORTHO05D005034 8.5e-125 451.4 486 54.3
Ciclev10033914m.g Citrus clementina HOM05D003126 ORTHO05D005034 4.7e-123 445.7 486 57.6
TWI09G0721 Tripterygium wilfordii HOM05D003126 ORTHO05D005034 3.0e-122 443.0 484 51.0
Gorai.004G036800 Gossypium raimondii HOM05D003126 ORTHO05D005034 1.2e-121 441.0 480 54.2
Duzib268G0285 Durio zibethinus HOM05D003126 ORTHO05D005034 2.0e-121 440.3 473 54.5
MBI01_g27625_MAGBIO Magnolia biondii HOM05D003126 ORTHO05D005034 2.6e-121 439.9 495 52.9
Sabra09G0047100 Salix brachista HOM05D003126 ORTHO05D005034 3.1e-119 433.0 490 51.6
Sabra16G0164800 Salix brachista HOM05D003126 ORTHO05D005034 5.9e-118 428.7 496 51.4
COL.COLO4_23919 Corchorus olitorius HOM05D003126 ORTHO05D005034 7.8e-118 428.3 484 54.1
Manes.10G145600 Manihot esculenta HOM05D003126 ORTHO05D005034 1.0e-117 427.9 488 51.8
Nn7g36179 Nelumbo nucifera HOM05D003126 ORTHO05D005034 1.2e-115 421.0 480 51.0
TWI73G1191 Tripterygium wilfordii HOM05D003126 ORTHO05D005034 9.8e-113 411.4 484 48.3
Nn1g00625 Nelumbo nucifera HOM05D003126 ORTHO05D005034 2.2e-112 410.2 481 50.9
Nn1g00624 Nelumbo nucifera HOM05D003126 ORTHO05D005034 3.7e-112 409.5 481 50.9
Glyma.08G153100 Glycine max HOM05D003126 ORTHO05D005034 5.0e-109 399.1 488 50.6
Aqoxy1G00215 Aquilegia oxysepala HOM05D003126 ORTHO05D005034 9.5e-108 394.8 491 48.9
TPR.G12288 Trifolium pratense HOM05D003126 ORTHO05D005034 1.6e-107 394.0 484 49.6
AUR62009373 Chenopodium quinoa HOM05D003126 ORTHO05D005034 3.6e-107 392.9 497 48.3
Phvul.005G036300 Phaseolus vulgaris HOM05D003126 ORTHO05D005034 8.0e-107 391.7 488 49.8
Glyma.15G272900 Glycine max HOM05D003126 ORTHO05D005034 7.5e-105 385.2 487 49.7
Medtr3g028140 Medicago truncatula HOM05D003126 ORTHO05D005034 2.9e-104 383.3 489 47.9
EL10Ac2g04311 Beta vulgaris HOM05D003126 ORTHO05D005034 4.9e-104 382.5 478 50.2
Hund03667 Selenicereus undatus HOM05D003126 ORTHO05D005034 4.1e-103 379.4 478 46.2
Lj9C630G6 Lonicera japonica HOM05D003126 ORTHO05D005034 9.2e-103 378.3 487 49.3
Nitab4.5_0003361g0050 Nicotiana tabacum HOM05D003126 ORTHO05D005034 4.6e-102 375.9 486 47.5
Lalb_Chr25g0283141 Lupinus albus HOM05D003126 ORTHO05D005034 3.0e-101 373.2 487 47.4
VMungo1080G1220 Vigna mungo HOM05D003126 ORTHO05D005034 6.6e-101 372.1 492 48.8
DCAR_006297 Daucus carota HOM05D003126 ORTHO05D005034 5.6e-100 369.0 497 48.1
Nitab4.5_0000634g0050 Nicotiana tabacum HOM05D003126 ORTHO05D005034 7.3e-100 368.6 486 47.5
Oeu047556.1 Olea europaea HOM05D003126 ORTHO05D005034 1.2e-99 367.9 486 47.1
Lj3g0024945 Lotus japonicus HOM05D003126 ORTHO05D005034 6.8e-98 362.1 483 47.6
Ca_14367_v3 Cicer arietinum L. HOM05D003126 ORTHO05D005034 1.2e-97 361.3 475 47.8
Lalb_Chr19g0132091 Lupinus albus HOM05D003126 ORTHO05D005034 1.5e-97 360.9 483 50.5
PSO384G4480 Papaver somniferum HOM05D003126 ORTHO05D005034 2.2e-96 357.1 488 45.1
PSO339G3182 Papaver somniferum HOM05D003126 ORTHO05D005034 2.9e-96 356.7 488 44.7
CAN.G170.119 Capsicum annuum HOM05D003126 ORTHO05D005034 6.4e-96 355.5 486 44.7
Cc02_g27720 Coffea canephora HOM05D003126 ORTHO05D005034 1.1e-95 354.8 477 47.2
Oeu010350.1 Olea europaea HOM05D003126 ORTHO05D005034 3.2e-95 353.2 467 46.0
Sopen01g033970 Solanum pennellii HOM05D003126 ORTHO05D005034 2.7e-94 350.1 480 46.9
Sc11g0009280 Simmondsia chinensis HOM05D003126 ORTHO05D005034 5.1e-93 345.9 482 44.8
Eucgr.J01261 Eucalyptus grandis HOM05D003126 ORTHO05D005034 1.5e-92 344.4 486 44.4
Lj3g0014064 Lotus japonicus HOM05D003126 ORTHO05D005034 2.5e-92 343.6 480 45.0
AUR62023054 Chenopodium quinoa HOM05D003126 ORTHO05D005034 4.7e-91 339.3 519 43.7
Lalb_Chr03g0033961 Lupinus albus HOM05D003126 ORTHO05D005034 1.1e-90 338.2 483 46.4
Psat5g204360 Pisum sativum HOM05D003126 ORTHO05D005034 3.1e-90 336.7 488 46.3
arahy.Tifrunner.gnm1.ann1.6ZH3JQ Arachis hypogaea HOM05D003126 ORTHO05D005034 1.5e-89 334.3 480 46.0
MELO3C023966.2 Cucumis melo HOM05D003126 ORTHO05D005034 2.9e-88 330.1 490 44.3
Psat4g148400 Pisum sativum HOM05D003126 ORTHO05D005034 2.9e-88 330.1 474 46.0
Solyc01g086980.4 Solanum lycopersicum HOM05D003126 ORTHO05D005034 1.2e-86 324.7 479 44.3
TPR.G28465 Trifolium pratense HOM05D003126 ORTHO05D005034 3.5e-86 323.2 498 43.2
PGR044G1687 Punica granatum HOM05D003126 ORTHO05D005034 2.3e-85 320.5 477 42.1
Sed0002072 Sechium edule HOM05D003126 ORTHO05D005034 2.5e-84 317.0 489 43.1
Peaxi162Scf00428g00715 Petunia axillaris HOM05D003126 ORTHO05D005034 1.1e-82 311.6 489 42.5
Ca_23876_v3 Cicer arietinum L. HOM05D003126 ORTHO05D005034 4.4e-81 306.2 489 42.9
MSTRG.20596 Avicennia marina HOM05D003126 ORTHO05D005034 2.4e-79 300.4 486 43.8
ATR0605G133 Amborella trichopoda HOM05D003126 ORTHO05D005034 2.1e-78 297.4 505 40.2
ClCG10G012470 Citrullus lanatus HOM05D003126 ORTHO05D005034 2.5e-76 290.4 490 40.8
Migut.N01475 Erythranthe guttata HOM05D003126 ORTHO05D005034 2.8e-75 287.0 495 40.4
Sed0019357 Sechium edule HOM05D003126 ORTHO05D005034 2.4e-71 273.9 499 38.9
CsaV3_3G032240 Cucumis sativus L. HOM05D003126 ORTHO05D005034 5.4e-71 272.7 490 40.2
HPP92_015771 Vanilla planifolia HOM05D003126 ORTHO05D005034 5.4e-71 272.7 495 36.6
Migut.B01323 Erythranthe guttata HOM05D003126 ORTHO05D005034 5.3e-66 256.1 530 39.1
ECA248G0857 Erigeron canadensis HOM05D003126 ORTHO05D005034 6.9e-66 255.8 484 38.4
Lj7A569T65 Lonicera japonica HOM05D003126 ORTHO05D005034 1.2e-65 255.0 333 49.2
Medtr8g037000 Medicago truncatula HOM05D003126 ORTHO05D005034 1.5e-65 254.6 603 37.1
CDE07G1013 Ceratophyllum demersum HOM05D003126 ORTHO05D005034 2.0e-65 254.2 492 37.6
Lsat_1_v5_gn_1_108381 Lactuca sativa HOM05D003126 ORTHO05D005034 1.3e-64 251.5 500 38.8
HanXRQChr06g0185401 Helianthus annuus HOM05D003126 ORTHO05D005034 1.4e-63 248.1 478 37.9
SGA_v2.0_scaffold4G02256 Striga asiatica HOM05D003126 ORTHO05D005034 2.7e-62 243.8 487 39.6
FAN01G1724 Fragaria x ananassa HOM05D003126 ORTHO05D005034 7.9e-62 242.3 232 56.5
arahy.Tifrunner.gnm1.ann1.4P5PRD Arachis hypogaea HOM05D003126 ORTHO05D005034 1.5e-60 238.0 300 50.7
CDE04G0460 Ceratophyllum demersum HOM05D003126 ORTHO05D005034 4.3e-60 236.5 492 36.0
THA.LOC104809863 Tarenaya hassleriana HOM05D003126 ORTHO05D005034 2.6e-57 227.3 486 34.8
HanXRQChr01g0016081 Helianthus annuus HOM05D003126 ORTHO05D005034 5.8e-57 226.1 483 36.9
AL3G24310 Arabidopsis lyrata HOM05D003126 ORTHO05D005034 1.6e-54 218.0 474 34.8
Aa31LG3G10 Aethionema arabicum HOM05D003126 ORTHO05D005034 2.4e-50 204.1 485 32.4
SGA_v2.0_scaffold95G28793 Striga asiatica HOM05D003126 ORTHO05D005034 1.2e-49 201.8 479 37.6
AT3G12640 Arabidopsis thaliana HOM05D003126 ORTHO05D005034 2.0e-49 201.1 474 34.2
Cpa.g.sc245.6 Carica papaya HOM05D003126 ORTHO05D005034 1.7e-48 198.0 212 54.7
Carub.0003s1199 Capsella rubella HOM05D003126 ORTHO05D005034 3.6e-46 190.3 474 32.1
Thhalv10020251m.g Eutrema salsugineum HOM05D003126 ORTHO05D005034 6.3e-43 179.5 350 37.1
BcaB04g18712 Brassica carinata HOM05D003126 ORTHO05D005034 5.3e-42 176.4 484 33.5
CARHR087150 Cardamine hirsuta HOM05D003126 ORTHO05D005034 1.3e-40 171.8 479 29.6
BraA03t12928Z Brassica rapa HOM05D003126 ORTHO05D005034 2.2e-40 171.0 481 31.2
Os08g0504600 Oryza sativa ssp. japonica HOM05D003126 ORTHO05D005034 3.8e-40 170.2 452 31.6
C03p45780 Brassica napus HOM05D003126 ORTHO05D005034 1.1e-39 168.7 350 34.9
BolC1t05192H Brassica oleracea HOM05D003126 ORTHO05D005034 1.9e-39 167.9 295 38.0
Sp3g10780 Schrenkiella parvula HOM05D003126 ORTHO05D005034 1.9e-39 167.9 474 30.2
A03p37730 Brassica napus HOM05D003126 ORTHO05D005034 3.2e-39 167.2 475 30.3
BcaC01g04024 Brassica carinata HOM05D003126 ORTHO05D005034 5.5e-39 166.4 457 31.5
Zm00001eb199820 Zea mays HOM05D003126 ORTHO05D005034 5.5e-39 166.4 517 29.4
Zm00001eb034750 Zea mays HOM05D003126 ORTHO05D005034 1.0e-37 162.2 517 29.4
BolC3t16853H Brassica oleracea HOM05D003126 ORTHO05D005034 3.0e-37 160.6 461 31.2
Zm00001eb079940 Zea mays HOM05D003126 ORTHO05D005034 1.5e-36 158.3 448 33.0
BNapus_Darmor_BZH_scaffold_149p00170 Brassica napus HOM05D003126 ORTHO05D005034 2.0e-36 157.9 354 32.8
BraA01t04119Z Brassica rapa HOM05D003126 ORTHO05D005034 2.0e-36 157.9 354 32.8
Zm00001eb424740 Zea mays HOM05D003126 ORTHO05D005034 4.4e-36 156.8 452 32.1
C01p52530 Brassica napus HOM05D003126 ORTHO05D005034 5.7e-36 156.4 354 33.3
Cpa.g.sc1688.1 Carica papaya HOM05D003126 ORTHO05D005034 7.4e-36 156.0 144 57.6
Lsat_1_v5_gn_8_14081 Lactuca sativa HOM05D003126 ORTHO05D005034 2.4e-34 151.0 272 41.5
unitig_85.g27215 Utricularia gibba HOM05D003126 ORTHO05D005034 3.8e-32 143.7 436 33.5
SEGI_13274 Sequoiadendron giganteum HOM05D003126 ORTHO05D005034 4.2e-31 140.2 482 30.5
BcaB04g21048 Brassica carinata HOM05D003126 ORTHO05D005034 3.0e-29 134.0 343 32.1
SEGI_32234 Sequoiadendron giganteum HOM05D003126 ORTHO05D005034 1.4e-21 108.6 466 29.0
SMO116G0171 Selaginella moellendorffii HOM05D003126 ORTHO05D005034 1.8e-21 108.2 389 27.0
AagrBONN_evm.TU.Sc2ySwM_117.3410 Anthoceros agrestis HOM05D003126 ORTHO05D005034 2.0e-17 94.7 323 28.8
Mapoly0177s0019 Marchantia polymorpha HOM05D003126 ORTHO05D005034 8.5e-16 89.4 391 29.2
Pp3c3_23400 Physcomitrium patens HOM05D003126 ORTHO05D005034 1.0e-08 65.9 67 43.3
CDE07G0165 Ceratophyllum demersum HOM05D003126 ORTHO05D010530 8.6e-08 62.8 121 33.9
COL.COLO4_05708 Corchorus olitorius HOM05D003126 ORTHO05D010530 1.9e-07 61.6 71 42.3
Duzib168G1775 Durio zibethinus HOM05D003126 ORTHO05D010530 1.9e-07 61.6 65 46.2
Pp3c10_12150 Physcomitrium patens HOM05D003126 ORTHO05D005034 1.2e-06 58.9 232 28.0
Rhsim03G0058300 Rhododendron simsii HOM05D003126 ORTHO05D010530 1.2e-06 58.9 39 61.5
Thecc.09G153400 Theobroma cacao HOM05D003126 ORTHO05D010530 1.6e-06 58.5 75 36.0
MBI16_g00828_MAGBIO Magnolia biondii HOM05D003126 ORTHO05D010530 2.1e-06 58.2 49 46.9
vmacro07518 Vaccinium macrocarpon HOM05D003126 ORTHO05D010530 2.1e-06 58.2 39 61.5
Gorai.009G009200 Gossypium raimondii HOM05D003126 ORTHO05D010530 3.6e-06 57.4 66 43.9

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (3 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (2 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (3 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (2 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (3 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (2 genes)
Lonicera japonica (2 genes)
Lotus japonicus (2 genes)
Lupinus albus (3 genes)
Magnolia biondii (2 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (3 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (2 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (0 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (2 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (4 genes)

Program Settings