Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028957 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 4.6e-129 464.5 231 100.0
Actinidia15231 Actinidia chinensis HOM05D005772 ORTHO05D006468 2.1e-73 279.6 204 68.1
Actinidia21305 Actinidia chinensis HOM05D005772 ORTHO05D006468 4.4e-71 271.9 205 66.3
TAR628G1655 Trochodendron aralioides HOM05D005772 ORTHO05D006468 2.5e-58 229.6 199 58.8
QL09p033796 Quercus lobata HOM05D005772 ORTHO05D006468 1.5e-55 220.3 208 56.2
Hma1.2p1_0612F.1_g188830 Hydrangea macrophylla HOM05D005772 ORTHO05D006468 1.7e-54 216.9 198 58.1
Duzib093G1216 Durio zibethinus HOM05D005772 ORTHO05D006468 4.1e-53 212.2 206 55.3
Nn5g28367 Nelumbo nucifera HOM05D005772 ORTHO05D006468 4.6e-52 208.8 200 55.5
Thecc.08G129200 Theobroma cacao HOM05D005772 ORTHO05D006468 1.3e-51 207.2 201 56.2
Lj4A634T17 Lonicera japonica HOM05D005772 ORTHO05D006468 8.6e-51 204.5 199 56.3
Rhsim06G0101700 Rhododendron simsii HOM05D005772 ORTHO05D006468 5.6e-50 201.8 172 64.5
Gohir.D05G239100 Gossypium hirsutum HOM05D005772 ORTHO05D006468 2.6e-47 193.0 202 53.0
CiPaw.16G025800 Carya illinoinensis HOM05D005772 ORTHO05D006468 3.4e-47 192.6 199 52.8
Gohir.A05G237000 Gossypium hirsutum HOM05D005772 ORTHO05D006468 4.9e-46 188.7 202 52.5
Gorai.009G247900 Gossypium raimondii HOM05D005772 ORTHO05D006468 1.6e-44 183.7 202 51.5
Glyma.04G249200 Glycine max HOM05D005772 ORTHO05D006468 2.8e-41 172.9 203 48.3
Phvul.007G102200 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 1.1e-40 171.0 217 46.5
Ciclev10003748m.g Citrus clementina HOM05D005772 ORTHO05D006468 6.9e-40 168.3 210 49.0
Dinv27285 Davidia involucrata HOM05D005772 ORTHO05D006468 6.9e-40 168.3 189 53.4
TPR.G21059 Trifolium pratense HOM05D005772 ORTHO05D006468 6.9e-40 168.3 218 46.8
Lj1g0001548 Lotus japonicus HOM05D005772 ORTHO05D006468 9.0e-40 167.9 213 46.0
Manes.02G166200 Manihot esculenta HOM05D005772 ORTHO05D006468 1.2e-39 167.5 196 50.0
Lalb_Chr08g0241421 Lupinus albus HOM05D005772 ORTHO05D006468 2.0e-39 166.8 213 45.1
Migut.C01111 Erythranthe guttata HOM05D005772 ORTHO05D006468 2.6e-39 166.4 209 45.9
Potri.005G180400 Populus trichocarpa HOM05D005772 ORTHO05D006468 2.6e-39 166.4 201 47.8
SGA_v2.0_scaffold52G18944 Striga asiatica HOM05D005772 ORTHO05D006468 9.9e-39 164.5 211 45.5
SGA_v2.0_scaffold52G18951 Striga asiatica HOM05D005772 ORTHO05D006468 9.9e-39 164.5 211 45.5
Psat5g087080 Pisum sativum HOM05D005772 ORTHO05D006468 3.8e-38 162.5 212 47.6
Migut.E01717 Erythranthe guttata HOM05D005772 ORTHO05D006468 1.9e-37 160.2 199 47.2
Glyma.06G113802 Glycine max HOM05D005772 ORTHO05D006468 1.9e-37 160.2 247 41.7
Nitab4.5_0000111g0180 Nicotiana tabacum HOM05D005772 ORTHO05D006468 2.4e-37 159.8 190 44.7
Aqoxy6G00258 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 4.2e-37 159.1 199 45.7
Cpa.g.sc64.117 Carica papaya HOM05D005772 ORTHO05D006468 4.2e-37 159.1 191 46.6
Cc10_g12210 Coffea canephora HOM05D005772 ORTHO05D006468 4.2e-37 159.1 203 45.3
VMungo1309G2764 Vigna mungo HOM05D005772 ORTHO05D006468 2.7e-36 156.4 211 42.2
MBI06_g44579_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 3.5e-36 156.0 190 48.9
Migut.E00857 Erythranthe guttata HOM05D005772 ORTHO05D006468 6.0e-36 155.2 199 46.7
DCAR_003562 Daucus carota HOM05D005772 ORTHO05D006468 1.7e-35 153.7 214 44.9
GSVIVG01008837001 Vitis vinifera HOM05D005772 ORTHO05D006468 6.6e-35 151.8 138 58.0
MSTRG.1426 Avicennia marina HOM05D005772 ORTHO05D006468 1.3e-33 147.5 207 44.0
SGA_v2.0_scaffold24G10436 Striga asiatica HOM05D002121 ORTHO05D004000 4.8e-33 145.6 238 39.9
PGR042G3290 Punica granatum HOM05D005772 ORTHO05D006468 6.2e-33 145.2 200 44.5
arahy.Tifrunner.gnm1.ann1.AWF3QX Arachis hypogaea HOM05D005772 ORTHO05D006468 2.6e-31 139.8 194 45.4
Atru.chr13.1514 Acer truncatum HOM05D005772 ORTHO05D006468 3.4e-31 139.4 170 51.2
Phvul.009G125600 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 5.8e-31 138.7 157 46.5
CsaV3_4G028090 Cucumis sativus L. HOM05D005772 ORTHO05D006468 1.3e-30 137.5 202 42.1
Nitab4.5_0004208g0030 Nicotiana tabacum HOM05D005772 ORTHO05D006468 2.2e-30 136.7 202 44.1
MELO3C010502.2 Cucumis melo HOM05D005772 ORTHO05D006468 2.9e-30 136.3 207 41.5
arahy.Tifrunner.gnm1.ann1.B1JKF4 Arachis hypogaea HOM05D005772 ORTHO05D006468 1.2e-28 131.0 182 44.5
CANSAT64G1440 Cannabis sativa HOM05D005772 ORTHO05D006468 6.7e-27 125.2 213 41.3
Sabra05G0136400 Salix brachista HOM05D005772 ORTHO05D006468 1.5e-26 124.0 172 45.9
ClCG11G015880 Citrullus lanatus HOM05D005772 ORTHO05D006468 1.6e-25 120.6 207 38.2
Solyc11g017475.1 Solanum lycopersicum HOM05D005772 ORTHO05D006468 4.8e-25 119.0 201 38.8
Solyc11g018470.3 Solanum lycopersicum HOM05D005772 ORTHO05D006468 4.8e-25 119.0 177 41.2
THA.LOC104800210 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 4.8e-25 119.0 196 41.3
Lsat_1_v5_gn_8_150021 Lactuca sativa HOM05D041600 ORTHO05D006468 3.1e-24 116.3 168 46.4
Oeu009481.1 Olea europaea HOM05D005772 ORTHO05D006468 4.0e-24 115.9 217 38.2
Carub.0001s2117 Capsella rubella HOM05D005772 ORTHO05D006468 9.0e-24 114.8 199 38.2
AL1G34900 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 2.6e-23 113.2 207 35.7
BcaB07g32170 Brassica carinata HOM05D005772 ORTHO05D006468 1.7e-22 110.5 197 36.0
Thhalv10008678m.g Eutrema salsugineum HOM05D005772 ORTHO05D006468 2.5e-21 106.7 188 37.2
BcaC05g26092 Brassica carinata HOM05D005772 ORTHO05D006468 5.5e-21 105.5 199 37.7
AT1G21722 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 1.2e-20 104.4 192 35.9
A07p14940 Brassica napus HOM05D005772 ORTHO05D006468 1.6e-20 104.0 198 37.4
Haze_17513 Corylus avellana HOM05D000187 ORTHO05D000926 2.1e-20 103.6 128 46.1
CARHR022100 Cardamine hirsuta HOM05D005772 ORTHO05D006468 4.6e-20 102.4 195 33.8
QL06p046996 Quercus lobata HOM05D005772 ORTHO05D006468 6.0e-20 102.1 141 44.7
A06p17810 Brassica napus HOM05D005772 ORTHO05D006468 2.3e-19 100.1 202 33.7
TWI18G0423 Tripterygium wilfordii HOM05D005772 ORTHO05D006468 3.0e-19 99.8 172 41.3
FAN02G1413 Fragaria x ananassa HOM05D005772 ORTHO05D006468 3.9e-19 99.4 200 38.5
C05p20700 Brassica napus HOM05D005772 ORTHO05D006468 5.1e-19 99.0 202 35.1
SGA_v2.0_scaffold2751G54198 Striga asiatica HOM05D005772 ORTHO05D006468 6.7e-19 98.6 128 43.0
Sabra07G0001200 Salix brachista HOM05D005772 ORTHO05D006468 1.5e-18 97.4 165 37.0
Potri.007G001400 Populus trichocarpa HOM05D005772 ORTHO05D006468 1.9e-18 97.1 178 37.6
FAN09G4514 Fragaria x ananassa HOM05D005772 ORTHO05D006468 2.5e-18 96.7 201 38.8
FAN14G5951 Fragaria x ananassa HOM05D005772 ORTHO05D006468 2.5e-18 96.7 197 39.1
Prupe.3G025100 Prunus persica HOM05D005772 ORTHO05D006468 2.5e-18 96.7 170 40.6
RcHm_v2.0_Chr2g0149081 Rosa chinensis HOM05D005772 ORTHO05D006468 7.4e-18 95.1 199 39.2
PGR031G3661 Punica granatum HOM05D005772 ORTHO05D006468 2.1e-17 93.6 165 37.6
Aqoxy2G03016 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 3.7e-17 92.8 201 34.3
Ciclev10013938m.g Citrus clementina HOM05D005772 ORTHO05D006468 4.8e-17 92.4 185 35.1
Ciclev10013939m.g Citrus clementina HOM05D005772 ORTHO05D006468 4.8e-17 92.4 185 35.1
MD04G1024200 Malus domestica HOM05D005772 ORTHO05D006468 6.2e-17 92.0 170 40.0
HPP92_009982 Vanilla planifolia HOM05D005772 ORTHO05D006468 1.4e-16 90.9 142 39.4
Lj3g0026748 Lotus japonicus HOM05D005772 ORTHO05D006468 1.8e-16 90.5 174 36.8
Ciclev10013941m.g Citrus clementina HOM05D005772 ORTHO05D006468 3.1e-16 89.7 185 35.7
CiPaw.02G128300 Carya illinoinensis HOM05D005772 ORTHO05D006468 6.9e-16 88.6 205 35.6
SalBow5G3743 Salvia bowleyana HOM05D005772 ORTHO05D006468 6.9e-16 88.6 206 35.9
Nn8g41076 Nelumbo nucifera HOM05D005772 ORTHO05D006468 1.2e-15 87.8 161 37.3
Cfa003428 Carpinus fangiana HOM05D005772 ORTHO05D006468 2.0e-15 87.0 107 43.0
SalBow5G0344 Salvia bowleyana HOM05D005772 ORTHO05D006468 3.4e-15 86.3 205 35.1
CSS0023973 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 4.5e-15 85.9 135 40.0
CiPaw.01G207400 Carya illinoinensis HOM05D005772 ORTHO05D006468 4.5e-15 85.9 167 38.3
Sed0012770 Sechium edule HOM05D005772 ORTHO05D006468 5.8e-15 85.5 183 33.9
MBI06_g27497_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 7.6e-15 85.1 103 46.6
PSO170G5960 Papaver somniferum HOM05D005772 ORTHO05D006468 2.2e-14 83.6 193 32.6
Potri.007G001650 Populus trichocarpa HOM05D005772 ORTHO05D006468 2.2e-14 83.6 88 47.7
Thecc.06G054300 Theobroma cacao HOM05D005772 ORTHO05D006468 2.2e-14 83.6 92 47.8
TPR.G38724 Trifolium pratense HOM05D003324 ORTHO05D006468 3.8e-14 82.8 166 39.2
CSS0004874 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 1.4e-13 80.9 131 38.9
PSO063G1689 Papaver somniferum HOM05D005772 ORTHO05D006468 2.5e-13 80.1 132 38.6
Rhsim08G0251400 Rhododendron simsii HOM05D000927 ORTHO05D000850 4.2e-13 79.3 105 43.8
Oeu038376.1 Olea europaea HOM05D005772 ORTHO05D006468 1.2e-12 77.8 108 40.7
SalBow8G0153 Salvia bowleyana HOM05D005772 ORTHO05D006468 1.2e-12 77.8 205 32.2
TAR625G1307 Trochodendron aralioides HOM05D005772 ORTHO05D006468 1.2e-12 77.8 214 32.7
GSVIVG01029533001 Vitis vinifera HOM05D005956 ORTHO05D007197 1.2e-12 77.8 91 45.1
Medtr0032s0080 Medicago truncatula HOM05D005772 ORTHO05D006468 2.1e-12 77.0 152 34.9
CANSAT01G3073 Cannabis sativa HOM05D005772 ORTHO05D006468 4.6e-12 75.9 119 36.1
Cfa018567 Carpinus fangiana HOM05D000187 ORTHO05D000926 1.8e-11 73.9 87 48.3
Aa31LG7G5690 Aethionema arabicum HOM05D002121 ORTHO05D004000 3.9e-11 72.8 199 30.2
Aa31LG4G2060 Aethionema arabicum HOM05D005772 ORTHO05D006468 6.7e-11 72.0 189 30.7
Sp5g33960 Schrenkiella parvula HOM05D005772 ORTHO05D006468 6.7e-11 72.0 172 33.7
vmacro10401 Vaccinium macrocarpon HOM05D005772 ORTHO05D006468 8.7e-11 71.6 208 30.3
CARHR072530 Cardamine hirsuta HOM05D005772 ORTHO05D006468 1.9e-10 70.5 183 30.1
A07p27410 Brassica napus HOM05D005772 ORTHO05D006468 2.5e-10 70.1 178 31.5
BraA07t30382Z Brassica rapa HOM05D005772 ORTHO05D006468 4.3e-10 69.3 177 29.9
ECA232G3854 Erigeron canadensis HOM05D041600 ORTHO05D045232 5.7e-10 68.9 130 38.5
BcaC08g45402 Brassica carinata HOM05D007236 ORTHO05D009150 9.7e-10 68.2 118 33.9
Carub.0002s2577 Capsella rubella HOM05D005772 ORTHO05D006468 1.3e-09 67.8 103 34.0
C06p30330 Brassica napus HOM05D005772 ORTHO05D006468 2.2e-09 67.0 178 29.8
BolC6t38196H Brassica oleracea HOM05D005772 ORTHO05D006468 2.2e-09 67.0 178 29.8
ATR0709G081 Amborella trichopoda HOM05D005772 ORTHO05D006468 4.8e-09 65.9 148 37.8
Medtr3g088090 Medicago truncatula HOM05D005772 ORTHO05D006468 8.2e-09 65.1 106 40.6
BcaB02g07187 Brassica carinata HOM05D005772 ORTHO05D006468 1.1e-08 64.7 179 31.3
FvH4_6g36610 Fragaria vesca HOM05D005772 ORTHO05D006468 1.4e-08 64.3 170 35.3
AT1G78922 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 2.4e-08 63.5 180 27.8
Manes.14G007000 Manihot esculenta HOM05D005772 ORTHO05D006468 1.2e-07 61.2 166 26.5
AL2G39360 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 2.0e-07 60.5 78 38.5
unitig_22.g6227 Utricularia gibba HOM05D005772 ORTHO05D006468 2.2e-06 57.0 33 72.7
Atru.chr1.2602 Acer truncatum HOM05D005772 ORTHO05D006468 3.8e-06 56.2 134 31.3
SHI31127 Sapria himalayana HOM05D005772 ORTHO05D006468 5.0e-06 55.8 130 36.9

Acer truncatum (2 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (2 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (0 genes)
Brassica carinata (4 genes)
Brassica napus (5 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (3 genes)
Cannabis sativa (2 genes)
Capsella rubella (2 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (2 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (3 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (1 genes)
Citrus clementina (4 genes)
Coffea canephora (1 genes)
Corchorus olitorius (0 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (3 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (0 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (2 genes)
Lupinus albus (1 genes)
Magnolia biondii (2 genes)
Malus domestica (1 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (2 genes)
Petunia axillaris (0 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (3 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (2 genes)
Quercus lobata (2 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (3 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (0 genes)
Solanum tuberosum (0 genes)
Striga asiatica (4 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (2 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (2 genes)
Zea mays (0 genes)

Program Settings