Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028124 Camellia sinensis var. sinensis HOM05D031701 ORTHO05D004336 4.0e-165 584.7 300 100.0
CSS0018240 Camellia sinensis var. sinensis HOM05D003550 ORTHO05D004336 1.5e-26 124.4 84 69.0
CSS0021926 Camellia sinensis var. sinensis HOM05D003550 ORTHO05D004336 1.5e-26 124.4 84 69.0
Dinv44694 Davidia involucrata HOM05D003550 ORTHO05D004336 3.8e-22 109.8 79 64.6
Actinidia10150 Actinidia chinensis HOM05D003550 ORTHO05D004336 4.2e-21 106.3 80 66.2
Actinidia06226 Actinidia chinensis HOM05D003550 ORTHO05D004336 7.1e-21 105.5 87 59.8
Dinv32016 Davidia involucrata HOM05D003550 ORTHO05D004336 7.1e-21 105.5 79 63.3
Aa31LG11G7760 Aethionema arabicum HOM05D003550 ORTHO05D004336 1.3e-19 101.3 76 59.2
GSVIVG01036651001 Vitis vinifera HOM05D003550 ORTHO05D004336 3.0e-19 100.1 124 52.4
Rhsim07G0068000 Rhododendron simsii HOM05D003550 ORTHO05D004336 3.9e-19 99.8 110 52.7
PGR031G1017 Punica granatum HOM05D003550 ORTHO05D004336 3.3e-18 96.7 115 47.8
CARHR199910 Cardamine hirsuta HOM05D003550 ORTHO05D004336 9.6e-18 95.1 80 52.5
CiPaw.14G008600 Carya illinoinensis HOM05D003550 ORTHO05D004336 1.3e-17 94.7 76 57.9
CSS0013469 Camellia sinensis var. sinensis HOM05D031701 ORTHO05D111170 1.6e-17 94.4 116 56.0
Prupe.2G040800 Prunus persica HOM05D003550 ORTHO05D004336 1.6e-17 94.4 121 50.4
Potri.001G029600 Populus trichocarpa HOM05D003550 ORTHO05D004336 2.1e-17 94.0 117 41.9
Manes.04G157700 Manihot esculenta HOM05D003550 ORTHO05D004336 2.8e-17 93.6 65 64.6
Gohir.A10G186900 Gossypium hirsutum HOM05D003550 ORTHO05D004336 3.6e-17 93.2 85 55.3
THA.LOC104819140 Tarenaya hassleriana HOM05D003550 ORTHO05D004336 3.6e-17 93.2 86 51.2
TAR623G1672 Trochodendron aralioides HOM05D003550 ORTHO05D004336 3.6e-17 93.2 125 49.6
Thecc.10G149700 Theobroma cacao HOM05D003550 ORTHO05D004336 4.8e-17 92.8 77 57.1
Sabra01G0021200 Salix brachista HOM05D003550 ORTHO05D004336 6.2e-17 92.4 118 44.9
AL6G24150 Arabidopsis lyrata HOM05D003550 ORTHO05D004336 8.1e-17 92.0 120 47.5
Ciclev10000023m.g Citrus clementina HOM05D003550 ORTHO05D004336 8.1e-17 92.0 74 59.5
CANSAT56G1944 Cannabis sativa HOM05D003550 ORTHO05D004336 1.1e-16 91.7 136 40.4
Gohir.D10G193900 Gossypium hirsutum HOM05D003550 ORTHO05D004336 1.1e-16 91.7 85 54.1
Gorai.011G216900 Gossypium raimondii HOM05D003550 ORTHO05D004336 1.1e-16 91.7 85 54.1
Cpa.g.sc847.2 Carica papaya HOM05D003550 ORTHO05D004336 1.4e-16 91.3 120 51.7
RcHm_v2.0_Chr1g0325801 Rosa chinensis HOM05D003550 ORTHO05D004336 1.4e-16 91.3 72 61.1
TWI15G0170 Tripterygium wilfordii HOM05D003550 ORTHO05D004336 1.4e-16 91.3 82 50.0
TAR369G1080 Trochodendron aralioides HOM05D003550 ORTHO05D004336 1.4e-16 91.3 124 43.5
AT5G13530 Arabidopsis thaliana HOM05D003550 ORTHO05D004336 1.8e-16 90.9 120 45.0
Nn7g36747 Nelumbo nucifera HOM05D003550 ORTHO05D004336 1.8e-16 90.9 80 55.0
Sp6g30490 Schrenkiella parvula HOM05D003550 ORTHO05D004336 1.8e-16 90.9 124 46.8
Aqoxy1G00373 Aquilegia oxysepala HOM05D003550 ORTHO05D004336 3.1e-16 90.1 89 50.6
arahy.Tifrunner.gnm1.ann1.LJ5CCV Arachis hypogaea HOM05D003550 ORTHO05D004336 4.0e-16 89.7 80 55.0
CDE02G3571 Ceratophyllum demersum HOM05D003550 ORTHO05D004336 4.0e-16 89.7 82 56.1
MD07G1048200 Malus domestica HOM05D003550 ORTHO05D004336 4.0e-16 89.7 121 44.6
Ca_12963_v3 Cicer arietinum L. HOM05D003550 ORTHO05D004336 5.3e-16 89.4 80 51.2
Cc00_g09560 Coffea canephora HOM05D003550 ORTHO05D004336 5.3e-16 89.4 66 60.6
CDE09G1076 Ceratophyllum demersum HOM05D003550 ORTHO05D004336 6.9e-16 89.0 83 55.4
Lsat_1_v5_gn_7_31581 Lactuca sativa HOM05D003550 ORTHO05D004336 6.9e-16 89.0 118 49.2
Peaxi162Scf00082g00122 Petunia axillaris HOM05D003550 ORTHO05D004336 6.9e-16 89.0 70 60.0
CAN.G1045.18 Capsicum annuum HOM05D003550 ORTHO05D004336 9.0e-16 88.6 70 60.0
Lj3g0007376 Lotus japonicus HOM05D003550 ORTHO05D004336 9.0e-16 88.6 71 57.7
Nitab4.5_0003481g0090 Nicotiana tabacum HOM05D003550 ORTHO05D004336 9.0e-16 88.6 66 62.1
Nitab4.5_0005808g0030 Nicotiana tabacum HOM05D003550 ORTHO05D004336 9.0e-16 88.6 66 62.1
Psat5g221640 Pisum sativum HOM05D003550 ORTHO05D004336 9.0e-16 88.6 87 51.7
TWI38G1858 Tripterygium wilfordii HOM05D003550 ORTHO05D004336 9.0e-16 88.6 86 51.2
Cfa010939 Carpinus fangiana HOM05D003550 ORTHO05D004336 1.2e-15 88.2 77 55.8
Haze_03007 Corylus avellana HOM05D003550 ORTHO05D004336 1.2e-15 88.2 77 55.8
Thhalv10012422m.g Eutrema salsugineum HOM05D003550 ORTHO05D004336 1.2e-15 88.2 121 44.6
Lalb_Chr01g0015821 Lupinus albus HOM05D003550 ORTHO05D004336 1.2e-15 88.2 80 51.2
arahy.Tifrunner.gnm1.ann1.VF4M4N Arachis hypogaea HOM05D003550 ORTHO05D004336 1.5e-15 87.8 85 51.8
Duzib106G1351 Durio zibethinus HOM05D003550 ORTHO05D004336 1.5e-15 87.8 85 51.8
FvH4_7g03470 Fragaria vesca HOM05D003550 ORTHO05D004336 1.5e-15 87.8 128 44.5
FAN03G0411 Fragaria x ananassa HOM05D003550 ORTHO05D004336 1.5e-15 87.8 127 44.9
FAN06G0346 Fragaria x ananassa HOM05D003550 ORTHO05D004336 1.5e-15 87.8 128 44.5
MD02G1282000 Malus domestica HOM05D003550 ORTHO05D004336 1.5e-15 87.8 68 57.4
Phvul.005G025000 Phaseolus vulgaris HOM05D003550 ORTHO05D004336 1.5e-15 87.8 66 57.6
FAN01G2608 Fragaria x ananassa HOM05D003550 ORTHO05D004336 2.0e-15 87.4 128 44.5
Carub.0006s1169 Capsella rubella HOM05D003550 ORTHO05D004336 2.6e-15 87.0 122 45.1
FAN10G1007 Fragaria x ananassa HOM05D003550 ORTHO05D004336 2.6e-15 87.0 128 44.5
Solyc01g096490.3 Solanum lycopersicum HOM05D003550 ORTHO05D004336 2.6e-15 87.0 70 58.6
Sopen01g040220 Solanum pennellii HOM05D003550 ORTHO05D004336 2.6e-15 87.0 70 58.6
CSS0028260 Camellia sinensis var. sinensis HOM05D031701 ORTHO05D111248 3.4e-15 86.7 144 45.1
Duzib114G0877 Durio zibethinus HOM05D003550 ORTHO05D004336 5.8e-15 85.9 86 53.5
Gohir.A05G399700 Gossypium hirsutum HOM05D003550 ORTHO05D004336 5.8e-15 85.9 85 50.6
Gohir.D04G016100 Gossypium hirsutum HOM05D003550 ORTHO05D004336 5.8e-15 85.9 85 50.6
Gorai.012G018700 Gossypium raimondii HOM05D003550 ORTHO05D004336 5.8e-15 85.9 85 50.6
C03p07080 Brassica napus HOM05D003550 ORTHO05D004336 7.6e-15 85.5 114 43.0
BolC3t13205H Brassica oleracea HOM05D003550 ORTHO05D004336 7.6e-15 85.5 114 43.0
PSO384G0047 Papaver somniferum HOM05D003550 ORTHO05D004336 7.6e-15 85.5 62 62.9
Glyma.11G157400 Glycine max HOM05D003550 ORTHO05D004336 9.9e-15 85.1 66 57.6
Oeu013090.1 Olea europaea HOM05D003550 ORTHO05D004336 1.7e-14 84.3 68 60.3
A03p06030 Brassica napus HOM05D003550 ORTHO05D004336 2.2e-14 84.0 115 45.2
BraA03t09941Z Brassica rapa HOM05D003550 ORTHO05D004336 2.2e-14 84.0 115 45.2
MELO3C012481.2 Cucumis melo HOM05D003550 ORTHO05D004336 2.2e-14 84.0 115 42.6
CsaV3_5G036850 Cucumis sativus L. HOM05D003550 ORTHO05D004336 2.2e-14 84.0 115 42.6
Glyma.04G134700 Glycine max HOM05D003550 ORTHO05D004336 2.2e-14 84.0 85 49.4
PSO339G1124 Papaver somniferum HOM05D003550 ORTHO05D004336 2.2e-14 84.0 63 60.3
Lalb_Chr04g0264171 Lupinus albus HOM05D003550 ORTHO05D004336 2.9e-14 83.6 116 46.6
QL04p017759 Quercus lobata HOM05D003550 ORTHO05D004336 2.9e-14 83.6 83 48.2
Migut.N01852 Erythranthe guttata HOM05D003550 ORTHO05D004336 4.9e-14 82.8 63 57.1
SGA_v2.0_scaffold232G43498 Striga asiatica HOM05D003550 ORTHO05D004336 4.9e-14 82.8 107 42.1
VMungo1080G0047 Vigna mungo HOM05D003550 ORTHO05D004336 4.9e-14 82.8 66 53.0
HanXRQChr04g0112901 Helianthus annuus HOM05D003550 ORTHO05D004336 6.4e-14 82.4 79 59.5
HPP92_003596 Vanilla planifolia HOM05D003550 ORTHO05D004336 6.4e-14 82.4 83 51.8
Medtr0137s0080 Medicago truncatula HOM05D003550 ORTHO05D004336 1.1e-13 81.6 69 55.1
Medtr3g014090 Medicago truncatula HOM05D003550 ORTHO05D004336 1.1e-13 81.6 69 55.1
DCAR_001913 Daucus carota HOM05D003550 ORTHO05D004336 1.4e-13 81.3 63 54.0
Glyma.13G195200 Glycine max HOM05D003550 ORTHO05D004336 1.4e-13 81.3 71 50.7
Sed0009251 Sechium edule HOM05D003550 ORTHO05D004336 2.4e-13 80.5 104 47.1
EL10Ac2g02773 Beta vulgaris HOM05D003550 ORTHO05D004336 3.2e-13 80.1 82 47.6
Sc10g0004490 Simmondsia chinensis HOM05D003550 ORTHO05D004336 7.1e-13 79.0 60 58.3
MSTRG.28033 Avicennia marina HOM05D003550 ORTHO05D004336 1.6e-12 77.8 63 57.1
AUR62026885 Chenopodium quinoa HOM05D003550 ORTHO05D004336 2.7e-12 77.0 70 48.6
AUR62044058 Chenopodium quinoa HOM05D003550 ORTHO05D004336 2.7e-12 77.0 70 48.6
HanXRQChr15g0481051 Helianthus annuus HOM05D003550 ORTHO05D004336 3.5e-12 76.6 117 39.3
unitig_0.g2291 Utricularia gibba HOM05D003550 ORTHO05D004336 3.5e-12 76.6 110 41.8
SHI04015 Sapria himalayana HOM05D003550 ORTHO05D000023 4.6e-12 76.3 113 40.7
Hund13381 Selenicereus undatus HOM05D003550 ORTHO05D004336 4.6e-12 76.3 66 51.5
HPP92_001023 Vanilla planifolia HOM05D003550 ORTHO05D004336 6.0e-12 75.9 66 51.5
SEGI_17265 Sequoiadendron giganteum HOM05D003550 ORTHO05D004336 1.3e-11 74.7 104 41.3
Lj9A657G27 Lonicera japonica HOM05D003550 ORTHO05D004336 6.7e-11 72.4 46 67.4
Atru.chr12.1267 Acer truncatum HOM05D003550 ORTHO05D004336 8.7e-11 72.0 65 50.8
vmacro04042 Vaccinium macrocarpon HOM05D003550 ORTHO05D004336 1.1e-10 71.6 81 43.2
MSTRG.5071 Avicennia marina HOM05D003550 ORTHO05D004336 2.5e-10 70.5 109 39.4
CSS0027876 Camellia sinensis var. sinensis HOM05D003550 ORTHO05D004336 3.3e-10 70.1 63 52.4
Zm00001eb350870 Zea mays HOM05D003550 ORTHO05D004336 4.3e-10 69.7 117 35.9
Zm00001eb287260 Zea mays HOM05D003550 ORTHO05D004336 5.6e-10 69.3 117 35.9
ATR0782G192 Amborella trichopoda HOM05D003550 ORTHO05D004336 4.8e-09 66.2 110 37.3
COL.COLO4_20695 Corchorus olitorius HOM05D003550 ORTHO05D004336 4.8e-09 66.2 46 65.2
Os05g0392050 Oryza sativa ssp. japonica HOM05D003550 ORTHO05D004336 8.1e-09 65.5 76 40.8
SMO271G0056 Selaginella moellendorffii HOM05D003550 ORTHO05D004336 8.1e-09 65.5 64 46.9
ATR0719G001 Amborella trichopoda HOM05D003550 ORTHO05D004336 4.0e-08 63.2 64 45.3
ATR0721G162 Amborella trichopoda HOM05D003550 ORTHO05D004336 1.2e-07 61.6 74 40.5
QL01p016949 Quercus lobata HOM05D003550 ORTHO05D004336 1.5e-07 61.2 59 55.9
Mapoly0002s0111 Marchantia polymorpha HOM05D003550 ORTHO05D004336 2.6e-07 60.5 120 33.3
Cfa009883 Carpinus fangiana HOM05D003550 ORTHO05D004336 3.4e-07 60.1 58 53.4
CBR_g16035 Chara braunii HOM05D003550 ORTHO05D004336 4.5e-07 59.7 66 40.9
Haze_23247 Corylus avellana HOM05D003550 ORTHO05D004336 7.6e-07 58.9 58 53.4
MELO3C014558.2 Cucumis melo HOM05D003550 ORTHO05D004336 6.4e-06 55.8 58 48.3
CsaV3_6G038940 Cucumis sativus L. HOM05D003550 ORTHO05D004336 6.4e-06 55.8 58 48.3

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (3 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (0 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (6 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (0 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (2 genes)
Cucumis melo (2 genes)
Cucumis sativus L. (2 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (3 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (0 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (0 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (2 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings