Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Gene Selection
Species Selection

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
CSS0025551	Camellia sinensis var. sinensis	HOM05D000206	ORTHO05D112514	5.3e-27	123.6	63	100.0
CSS0039676	Camellia sinensis var. sinensis	HOM05D000206	ORTHO05D002004	1.3e-22	109.0	74	81.1
CSS0029347	Camellia sinensis var. sinensis	HOM05D000206	ORTHO05D002004	6.3e-12	73.6	50	76.0
CSS0029177	Camellia sinensis var. sinensis	HOM05D000206	ORTHO05D002004	1.1e-11	72.8	62	66.1
vmacro18482	Vaccinium macrocarpon	HOM05D000206	ORTHO05D002004	2.6e-10	68.2	62	59.7
Rhsim08G0023800	Rhododendron simsii	HOM05D000206	ORTHO05D002004	5.9e-10	67.0	62	61.3
Dinv28286	Davidia involucrata	HOM05D000206	ORTHO05D002004	1.0e-09	66.2	60	63.3
QL06p053550	Quercus lobata	HOM05D000206	ORTHO05D002004	1.7e-09	65.5	59	64.4
Ciclev10009037m.g	Citrus clementina	HOM05D000206	ORTHO05D002004	2.9e-09	64.7	60	58.3
GSVIVG01026415001	Vitis vinifera	HOM05D000206	ORTHO05D002004	3.8e-09	64.3	60	60.0
Dinv19112	Davidia involucrata	HOM05D000206	ORTHO05D002004	5.0e-09	63.9	60	61.7
Dinv29564	Davidia involucrata	HOM05D000206	ORTHO05D002004	1.1e-08	62.8	60	58.3
Dinv29570	Davidia involucrata	HOM05D000206	ORTHO05D002004	1.1e-08	62.8	60	58.3
Rhsim08G0024600	Rhododendron simsii	HOM05D000206	ORTHO05D002004	1.1e-08	62.8	59	61.0
Oeu024777.1	Olea europaea	HOM05D000206	ORTHO05D002004	1.4e-08	62.4	60	56.7
Atru.chr3.4	Acer truncatum	HOM05D000206	ORTHO05D002004	1.9e-08	62.0	60	56.7
PGR119G0947	Punica granatum	HOM05D000206	ORTHO05D002004	1.9e-08	62.0	60	56.7
CiPaw.13G127500	Carya illinoinensis	HOM05D000206	ORTHO05D002004	4.2e-08	60.8	60	53.3
CiPaw.13G127600	Carya illinoinensis	HOM05D000206	ORTHO05D002004	4.2e-08	60.8	60	53.3
RcHm_v2.0_Chr2g0096611	Rosa chinensis	HOM05D000206	ORTHO05D002004	4.2e-08	60.8	60	55.0
CAN.G883.10	Capsicum annuum	HOM05D000206	ORTHO05D002004	5.5e-08	60.5	59	54.2
Nitab4.5_0011544g0010	Nicotiana tabacum	HOM05D000206	ORTHO05D002004	5.5e-08	60.5	58	56.9
Nitab4.5_0012341g0020	Nicotiana tabacum	HOM05D000206	ORTHO05D002004	5.5e-08	60.5	58	56.9
Peaxi162Scf00981g00113	Petunia axillaris	HOM05D000206	ORTHO05D002004	5.5e-08	60.5	58	55.2
RcHm_v2.0_Chr6g0310881	Rosa chinensis	HOM05D000206	ORTHO05D002004	5.5e-08	60.5	60	56.7
Cfa007123	Carpinus fangiana	HOM05D000206	ORTHO05D002004	7.2e-08	60.1	60	55.0
Dinv19109	Davidia involucrata	HOM05D000206	ORTHO05D002004	7.2e-08	60.1	60	60.0
Actinidia35694	Actinidia chinensis	HOM05D000206	ORTHO05D002004	1.6e-07	58.9	60	55.0
Dinv29566	Davidia involucrata	HOM05D000206	ORTHO05D002004	1.6e-07	58.9	58	56.9
Duzib138G1234	Durio zibethinus	HOM05D000206	ORTHO05D002004	1.6e-07	58.9	60	55.0
Hma1.2p1_0085F.1_g044210	Hydrangea macrophylla	HOM05D000206	ORTHO05D002004	1.6e-07	58.9	55	61.8
PGSC0003DMG400009427	Solanum tuberosum	HOM05D000206	ORTHO05D002004	1.6e-07	58.9	59	52.5
DCAR_006176	Daucus carota	HOM05D000206	ORTHO05D002004	2.1e-07	58.5	55	61.8
Dinv26675	Davidia involucrata	HOM05D000206	ORTHO05D002004	2.1e-07	58.5	57	57.9
Dinv29563	Davidia involucrata	HOM05D000206	ORTHO05D002004	2.1e-07	58.5	57	56.1
Gorai.001G212500	Gossypium raimondii	HOM05D000206	ORTHO05D002004	2.1e-07	58.5	57	57.9
Solyc02g068315.1	Solanum lycopersicum	HOM05D000206	ORTHO05D002004	2.1e-07	58.5	59	52.5
Sopen02g017420	Solanum pennellii	HOM05D000206	ORTHO05D002004	2.1e-07	58.5	59	52.5
Hma1.2p1_0085F.1_g044190	Hydrangea macrophylla	HOM05D000206	ORTHO05D002004	2.7e-07	58.2	53	60.4
QL02p035486	Quercus lobata	HOM05D000206	ORTHO05D002004	3.6e-07	57.8	60	56.7
Dinv26674	Davidia involucrata	HOM05D000206	ORTHO05D002004	4.6e-07	57.4	57	56.1
Cfa020813	Carpinus fangiana	HOM05D000206	ORTHO05D002004	6.1e-07	57.0	59	54.2
COL.COLO4_24532	Corchorus olitorius	HOM05D000206	ORTHO05D002004	6.1e-07	57.0	58	55.2
Haze_19173	Corylus avellana	HOM05D000206	ORTHO05D002004	6.1e-07	57.0	60	53.3
Haze_19187	Corylus avellana	HOM05D000206	ORTHO05D002004	6.1e-07	57.0	60	53.3
Dinv29567	Davidia involucrata	HOM05D000206	ORTHO05D002004	7.9e-07	56.6	60	55.0
Gohir.D07G190400	Gossypium hirsutum	HOM05D000206	ORTHO05D002004	7.9e-07	56.6	56	57.1
Migut.K00869	Erythranthe guttata	HOM05D000206	ORTHO05D002004	1.0e-06	56.2	54	59.3
Lj2A507T49	Lonicera japonica	HOM05D000206	ORTHO05D002004	1.4e-06	55.8	57	56.1
Gohir.A07G183700	Gossypium hirsutum	HOM05D000206	ORTHO05D002004	1.8e-06	55.5	57	54.4
Manes.01G158700	Manihot esculenta	HOM05D000206	ORTHO05D002004	1.8e-06	55.5	57	52.6
TPR.G33746	Trifolium pratense	HOM05D000141	ORTHO05D004489	1.8e-06	55.5	56	50.0
AT1G14120	Arabidopsis thaliana	HOM05D000206	ORTHO05D002004	2.3e-06	55.1	69	44.9
CANSAT64G1403	Cannabis sativa	HOM05D000206	ORTHO05D002004	2.3e-06	55.1	60	48.3
Cfa010665	Carpinus fangiana	HOM05D000206	ORTHO05D002004	2.3e-06	55.1	59	52.5
Dinv26676	Davidia involucrata	HOM05D000206	ORTHO05D002004	2.3e-06	55.1	56	53.6
FvH4_1g09830	Fragaria vesca	HOM05D000206	ORTHO05D002004	2.3e-06	55.1	60	53.3
FAN19G2057	Fragaria x ananassa	HOM05D000206	ORTHO05D002004	2.3e-06	55.1	60	53.3
DCAR_006175	Daucus carota	HOM05D000206	ORTHO05D002004	3.0e-06	54.7	55	58.2
Dinv26677	Davidia involucrata	HOM05D000206	ORTHO05D002004	3.0e-06	54.7	60	51.7
PSO017G4970	Papaver somniferum	HOM05D000206	ORTHO05D002004	3.0e-06	54.7	57	56.1
PSO170G4790	Papaver somniferum	HOM05D000206	ORTHO05D002004	3.0e-06	54.7	57	56.1
Sopen02g017410	Solanum pennellii	HOM05D000206	ORTHO05D002004	3.0e-06	54.7	59	49.2
Thecc.01G171100	Theobroma cacao	HOM05D000206	ORTHO05D002004	3.0e-06	54.7	60	53.3
MD02G1107000	Malus domestica	HOM05D000206	ORTHO05D002004	3.9e-06	54.3	61	54.1
Solyc02g068330.2	Solanum lycopersicum	HOM05D000206	ORTHO05D002004	3.9e-06	54.3	56	51.8
Sopen02g017430	Solanum pennellii	HOM05D000206	ORTHO05D002004	3.9e-06	54.3	56	51.8
FAN23G2017	Fragaria x ananassa	HOM05D000206	ORTHO05D002004	5.1e-06	53.9	57	54.4
Lj8A143T56	Lonicera japonica	HOM05D000206	ORTHO05D002004	5.1e-06	53.9	59	50.8
MD10G1316500	Malus domestica	HOM05D000206	ORTHO05D002004	5.1e-06	53.9	60	50.0
PSO170G4451	Papaver somniferum	HOM05D000206	ORTHO05D002004	5.1e-06	53.9	57	56.1
PGR119G0734	Punica granatum	HOM05D000206	ORTHO05D002004	5.1e-06	53.9	60	50.0
RcHm_v2.0_Chr2g0096111	Rosa chinensis	HOM05D000206	ORTHO05D002004	5.1e-06	53.9	60	50.0
Actinidia35172	Actinidia chinensis	HOM05D000206	ORTHO05D002004	6.7e-06	53.5	59	50.8
Eucgr.I02177	Eucalyptus grandis	HOM05D000206	ORTHO05D002004	6.7e-06	53.5	60	53.3
Lj2g0012095	Lotus japonicus	HOM05D000206	ORTHO05D002004	6.7e-06	53.5	57	49.1
Cfa005416	Carpinus fangiana	HOM05D000206	ORTHO05D002004	8.8e-06	53.1	56	53.6
Cfa020817	Carpinus fangiana	HOM05D000206	ORTHO05D002004	8.8e-06	53.1	59	52.5
FAN23G2866	Fragaria x ananassa	HOM05D000206	ORTHO05D002004	8.8e-06	53.1	60	51.7

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm

Tree construction algorithm

Edit MSA alignment

Interactive Phylogenetics Module

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