Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024650 Camellia sinensis var. sinensis HOM05D005743 ORTHO05D007031 9.6e-311 1069.3 540 100.0
Dinv19686 Davidia involucrata HOM05D005743 ORTHO05D007031 5.5e-258 894.0 542 83.8
Ciclev10019600m.g Citrus clementina HOM05D005743 ORTHO05D007031 9.8e-247 856.7 545 79.6
Hma1.2p1_0491F.1_g164590 Hydrangea macrophylla HOM05D005743 ORTHO05D007031 1.0e-243 846.7 535 79.6
Rhsim01G0285500 Rhododendron simsii HOM05D005743 ORTHO05D007031 1.0e-243 846.7 542 80.6
TAR362G0334 Trochodendron aralioides HOM05D005743 ORTHO05D007031 1.0e-240 836.6 536 78.4
Cfa005908 Carpinus fangiana HOM05D005743 ORTHO05D007031 1.3e-238 829.7 546 78.8
QL12p028420 Quercus lobata HOM05D005743 ORTHO05D007031 4.1e-237 824.7 540 77.8
Atru.chr5.1142 Acer truncatum HOM05D005743 ORTHO05D007031 7.0e-237 823.9 549 77.0
Sopen06g003890 Solanum pennellii HOM05D005743 ORTHO05D007031 1.1e-234 816.6 542 76.8
Lj2A1195G24 Lonicera japonica HOM05D005743 ORTHO05D007031 1.5e-234 816.2 541 76.5
Thecc.01G301000 Theobroma cacao HOM05D005743 ORTHO05D007031 2.5e-234 815.5 544 77.8
Solyc06g009130.3 Solanum lycopersicum HOM05D005743 ORTHO05D007031 1.2e-233 813.1 542 76.8
COL.COLO4_23341 Corchorus olitorius HOM05D005743 ORTHO05D007031 1.6e-233 812.8 535 78.1
MD03G1288600 Malus domestica HOM05D005743 ORTHO05D007031 3.6e-233 811.6 529 77.3
Prupe.8G261900 Prunus persica HOM05D005743 ORTHO05D007031 3.6e-233 811.6 528 76.9
Oeu046676.1 Olea europaea HOM05D005743 ORTHO05D007031 4.7e-233 811.2 542 77.1
PSO170G2277 Papaver somniferum HOM05D005743 ORTHO05D007031 5.2e-232 807.7 543 76.2
Nitab4.5_0002470g0070 Nicotiana tabacum HOM05D005743 ORTHO05D007031 1.5e-231 806.2 543 76.1
Aqoxy2G02938 Aquilegia oxysepala HOM05D005743 ORTHO05D007031 2.0e-231 805.8 535 76.3
Nitab4.5_0005805g0040 Nicotiana tabacum HOM05D005743 ORTHO05D007031 2.0e-231 805.8 542 76.0
Potri.014G128600 Populus trichocarpa HOM05D005743 ORTHO05D007031 5.8e-231 804.3 542 75.8
TWI59G0198 Tripterygium wilfordii HOM05D005743 ORTHO05D007031 1.3e-230 803.1 542 75.3
MBI18_g06031_MAGBIO Magnolia biondii HOM05D005743 ORTHO05D007031 8.3e-230 800.4 542 75.1
PSO407G0387 Papaver somniferum HOM05D005743 ORTHO05D007031 1.9e-229 799.3 543 75.3
CsaV3_4G000840 Cucumis sativus L. HOM05D005743 ORTHO05D007031 5.4e-229 797.7 542 73.8
Sed0000130 Sechium edule HOM05D005743 ORTHO05D007031 7.0e-229 797.3 542 75.6
CAN.G1989.8 Capsicum annuum HOM05D005743 ORTHO05D007031 9.2e-229 797.0 542 75.8
MELO3C017953.2 Cucumis melo HOM05D005743 ORTHO05D007031 2.0e-228 795.8 542 74.5
GSVIVG01028023001 Vitis vinifera HOM05D005743 ORTHO05D007031 3.5e-228 795.0 525 77.1
Lj5g0015401 Lotus japonicus HOM05D005743 ORTHO05D007031 6.6e-227 790.8 530 76.2
CANSAT25G1370 Cannabis sativa HOM05D005743 ORTHO05D007031 3.3e-226 788.5 533 75.0
VMungo0720G3165 Vigna mungo HOM05D005743 ORTHO05D007031 9.5e-226 786.9 526 74.9
Manes.01G219600 Manihot esculenta HOM05D005743 ORTHO05D007031 1.2e-225 786.6 538 73.2
Cc01_g20880 Coffea canephora HOM05D005743 ORTHO05D007031 2.1e-225 785.8 541 74.9
PGR044G1461 Punica granatum HOM05D005743 ORTHO05D007031 4.7e-225 784.6 601 70.2
Migut.D00150 Erythranthe guttata HOM05D005743 ORTHO05D007031 6.2e-225 784.3 544 74.4
THA.LOC104817489 Tarenaya hassleriana HOM05D005743 ORTHO05D007031 1.1e-224 783.5 541 72.3
Duzib138G1616 Durio zibethinus HOM05D005743 ORTHO05D007031 2.3e-224 782.3 544 74.6
Sc05g0003820 Simmondsia chinensis HOM05D005743 ORTHO05D007031 3.1e-224 781.9 522 74.7
FAN20G0637 Fragaria x ananassa HOM05D005743 ORTHO05D007031 1.5e-223 779.6 522 75.5
Gorai.007G127900 Gossypium raimondii HOM05D005743 ORTHO05D007031 2.6e-223 778.9 528 75.4
Phvul.007G147000 Phaseolus vulgaris HOM05D005743 ORTHO05D007031 3.4e-223 778.5 526 74.3
Ca_10331_v3 Cicer arietinum L. HOM05D005743 ORTHO05D007031 4.4e-223 778.1 525 75.2
ClCG10G010970 Citrullus lanatus HOM05D005743 ORTHO05D007031 5.8e-223 777.7 577 69.8
FAN15G2676 Fragaria x ananassa HOM05D005743 ORTHO05D007031 5.8e-223 777.7 526 75.5
Peaxi162Scf00399g00716 Petunia axillaris HOM05D005743 ORTHO05D007031 5.8e-223 777.7 519 75.5
RcHm_v2.0_Chr6g0294071 Rosa chinensis HOM05D005743 ORTHO05D007031 1.7e-222 776.2 531 74.0
Cpa.g.sc9.258 Carica papaya HOM05D005743 ORTHO05D007031 2.9e-222 775.4 534 73.6
arahy.Tifrunner.gnm1.ann1.39WPG8 Arachis hypogaea HOM05D005743 ORTHO05D007031 3.7e-222 775.0 526 74.5
arahy.Tifrunner.gnm1.ann1.V1RZF6 Arachis hypogaea HOM05D005743 ORTHO05D007031 3.7e-222 775.0 526 74.5
Migut.N01507 Erythranthe guttata HOM05D005743 ORTHO05D007031 6.4e-222 774.2 523 74.6
Glyma.10G018000 Glycine max HOM05D005743 ORTHO05D007031 1.4e-221 773.1 528 73.9
THA.LOC104827666 Tarenaya hassleriana HOM05D005743 ORTHO05D007031 2.4e-221 772.3 531 72.1
TPR.G33974 Trifolium pratense HOM05D005743 ORTHO05D007031 2.4e-221 772.3 527 74.2
AT2G47600 Arabidopsis thaliana HOM05D005743 ORTHO05D007031 4.1e-221 771.5 546 71.4
SalBow2G1764 Salvia bowleyana HOM05D005743 ORTHO05D007031 4.1e-221 771.5 541 71.3
Medtr1g088430 Medicago truncatula HOM05D005743 ORTHO05D007031 7.1e-221 770.8 529 74.5
Migut.O00421 Erythranthe guttata HOM05D005743 ORTHO05D007031 1.6e-220 769.6 523 74.6
AL4G47180 Arabidopsis lyrata HOM05D005743 ORTHO05D007031 2.1e-220 769.2 546 71.2
Eucgr.K03487 Eucalyptus grandis HOM05D005743 ORTHO05D007031 3.5e-220 768.5 526 75.7
Carub.0004s3033 Capsella rubella HOM05D005743 ORTHO05D007031 7.8e-220 767.3 544 71.3
CAN.G1280.3 Capsicum annuum HOM05D005743 ORTHO05D007031 1.3e-219 766.5 544 73.9
Sabra14G0095500 Salix brachista HOM05D005743 ORTHO05D007031 1.3e-219 766.5 556 72.1
BraA05t19031Z Brassica rapa HOM05D005743 ORTHO05D007031 1.5e-218 763.1 545 71.0
C04p00250 Brassica napus HOM05D005743 ORTHO05D007031 3.3e-218 761.9 545 70.8
BolC4t21668H Brassica oleracea HOM05D005743 ORTHO05D007031 3.3e-218 761.9 545 70.8
Thhalv10001391m.g Eutrema salsugineum HOM05D005743 ORTHO05D007031 9.5e-218 760.4 544 70.6
A05p00330 Brassica napus HOM05D005743 ORTHO05D007031 2.1e-217 759.2 545 70.6
AUR62025577 Chenopodium quinoa HOM05D005743 ORTHO05D007031 3.6e-217 758.4 526 71.9
Gohir.D11G119400 Gossypium hirsutum HOM05D005743 ORTHO05D007031 3.6e-217 758.4 525 73.5
Aa31LG1G28940 Aethionema arabicum HOM05D005743 ORTHO05D007031 8.1e-217 757.3 543 70.9
AUR62008667 Chenopodium quinoa HOM05D005743 ORTHO05D007031 3.1e-216 755.4 534 71.0
CARHR143000 Cardamine hirsuta HOM05D005743 ORTHO05D007031 5.2e-216 754.6 544 70.0
Actinidia24820 Actinidia chinensis HOM05D005743 ORTHO05D007031 1.4e-213 746.5 486 79.4
SalBow3G4402 Salvia bowleyana HOM05D005743 ORTHO05D007031 2.1e-212 742.7 541 70.6
FvH4_2g25770 Fragaria vesca HOM05D005743 ORTHO05D007031 2.7e-212 742.3 498 75.9
HanXRQChr13g0413001 Helianthus annuus HOM05D005743 ORTHO05D007031 3.0e-211 738.8 541 69.1
DCAR_005790 Daucus carota HOM05D005743 ORTHO05D007031 6.6e-211 737.6 560 68.2
Sc05g0003780 Simmondsia chinensis HOM05D005743 ORTHO05D007031 5.6e-210 734.6 521 71.4
SGA_v2.0_scaffold198G41143 Striga asiatica HOM05D005743 ORTHO05D007031 5.6e-210 734.6 552 67.9
Eucgr.K03488 Eucalyptus grandis HOM05D005743 ORTHO05D007031 6.2e-209 731.1 476 77.9
FAN24G1083 Fragaria x ananassa HOM05D005743 ORTHO05D007031 3.1e-208 728.8 488 75.4
HPP92_016082 Vanilla planifolia HOM05D005743 ORTHO05D007031 6.9e-208 727.6 521 71.6
Lsat_1_v5_gn_5_191280 Lactuca sativa HOM05D005743 ORTHO05D007031 9.0e-208 727.2 530 70.2
EL10Ac7g17510 Beta vulgaris HOM05D005743 ORTHO05D007031 6.4e-206 721.1 517 71.0
CDE02G2026 Ceratophyllum demersum HOM05D005743 ORTHO05D007031 1.1e-205 720.3 531 69.7
ECA248G2514 Erigeron canadensis HOM05D005743 ORTHO05D007031 3.3e-202 708.8 495 72.9
Os11g0660000 Oryza sativa ssp. japonica HOM05D005743 ORTHO05D007031 3.4e-199 698.7 517 68.7
Hund18172 Selenicereus undatus HOM05D005743 ORTHO05D007031 3.8e-198 695.3 523 67.5
BcaB02g08759 Brassica carinata HOM05D005743 ORTHO05D007031 5.4e-197 691.4 543 65.9
Ah.08g213420 Amaranthus hybridus HOM05D005743 ORTHO05D007031 1.9e-194 682.9 521 66.0
Haze_04942 Corylus avellana HOM05D005743 ORTHO05D007031 4.8e-193 678.3 598 64.7
RcHm_v2.0_Chr6g0294081 Rosa chinensis HOM05D005743 ORTHO05D007031 9.9e-191 670.6 532 66.0
Nn4g25787 Nelumbo nucifera HOM05D005743 ORTHO05D007031 1.4e-181 640.2 410 78.5
Lalb_Chr06g0166491 Lupinus albus HOM05D005743 ORTHO05D007031 3.2e-181 639.0 549 62.7
SGA_v2.0_scaffold1G00362 Striga asiatica HOM05D005743 ORTHO05D007031 1.5e-175 620.2 501 65.7
FAN27G1322 Fragaria x ananassa HOM05D005743 ORTHO05D007031 6.7e-171 604.7 407 75.4
Psat6g165240 Pisum sativum HOM05D005743 ORTHO05D007031 7.7e-167 591.3 405 73.6
Nitab4.5_0001879g0130 Nicotiana tabacum HOM05D005743 ORTHO05D007031 2.7e-135 486.5 554 50.5
vmacro15016 Vaccinium macrocarpon HOM05D005743 ORTHO05D007031 3.3e-133 479.6 351 72.4
Peaxi162Scf00001g04234 Petunia axillaris HOM05D005743 ORTHO05D007031 7.5e-130 468.4 546 50.4
CiPaw.08G094900 Carya illinoinensis HOM05D005743 ORTHO05D007031 5.2e-115 419.1 291 72.9
Pp3c1_39250 Physcomitrium patens HOM05D005743 ORTHO05D007031 6.4e-113 412.1 547 43.0
AagrBONN_evm.TU.Sc2ySwM_344.5359 Anthoceros agrestis HOM05D005743 ORTHO05D007031 4.6e-111 406.0 542 43.5
Mapoly0134s0038 Marchantia polymorpha HOM05D005743 ORTHO05D007031 7.8e-111 405.2 519 43.2
Gohir.A11G114301 Gossypium hirsutum HOM05D005743 ORTHO05D007031 3.0e-110 403.3 289 71.3
ATR0706G014 Amborella trichopoda HOM05D005743 ORTHO05D007031 4.3e-109 399.4 261 74.7
Hund18173 Selenicereus undatus HOM05D005743 ORTHO05D007031 4.7e-108 396.0 269 71.0
Pp3c2_6060 Physcomitrium patens HOM05D005743 ORTHO05D007031 5.8e-106 389.0 553 41.0
Zm00001eb165450 Zea mays HOM05D005743 ORTHO05D007031 1.7e-105 387.5 315 62.9
AagrBONN_evm.TU.Sc2ySwM_368.1084 Anthoceros agrestis HOM05D005743 ORTHO05D007031 2.3e-102 377.1 540 40.4
Actinidia26720 Actinidia chinensis HOM05D005743 ORTHO05D007031 4.2e-88 329.7 313 59.4
SMO351G0556 Selaginella moellendorffii HOM05D005743 ORTHO05D007031 6.6e-86 322.4 421 42.0
THA.LOC104798829 Tarenaya hassleriana HOM05D005743 ORTHO05D007031 4.9e-81 306.2 181 81.8
CBR_g22437 Chara braunii HOM05D005743 ORTHO05D007031 4.2e-72 276.6 624 31.4
Nitab4.5_0002433g0030 Nicotiana tabacum HOM05D005743 ORTHO05D007031 5.1e-62 243.0 287 49.5
Os02g0644900 Oryza sativa ssp. japonica HOM05D005743 ORTHO05D007031 2.8e-60 237.3 222 59.5
SEGI_24798 Sequoiadendron giganteum HOM05D005743 ORTHO05D007031 2.3e-54 217.6 162 69.1
EL10Ac3g06395 Beta vulgaris HOM05D005743 ORTHO05D007031 5.3e-51 206.5 152 67.8
PRCOL_00004461 Prasinoderma coloniale HOM05D005743 ORTHO05D007031 7.7e-50 202.6 703 26.6
Actinidia21045 Actinidia chinensis HOM05D005743 ORTHO05D007031 1.1e-48 198.7 98 93.9
Zm00001eb407450 Zea mays HOM05D005743 ORTHO05D007031 7.2e-48 196.1 174 58.6
Rhsim05G0173900 Rhododendron simsii HOM05D005743 ORTHO05D007031 3.0e-46 190.7 132 75.8
Actinidia21044 Actinidia chinensis HOM05D005743 ORTHO05D007031 1.7e-44 184.9 127 75.6
SEGI_13510 Sequoiadendron giganteum HOM05D005743 ORTHO05D007031 7.2e-40 169.5 115 72.2
Cre11.g479600 Chlamydomonas reinhardtii HOM05D005743 ORTHO05D007031 3.7e-28 130.6 179 41.3
Nitab4.5_0002433g0040 Nicotiana tabacum HOM05D005743 ORTHO05D007031 1.2e-26 125.6 97 61.9
Glyma.02G017550 Glycine max HOM05D005743 ORTHO05D007031 2.9e-25 120.9 77 77.9
SEGI_31813 Sequoiadendron giganteum HOM05D005743 ORTHO05D007031 2.0e-18 98.2 95 51.6
SEGI_40223 Sequoiadendron giganteum HOM05D005743 ORTHO05D007031 1.5e-16 92.0 110 47.3
ATR0706G260 Amborella trichopoda HOM05D005743 ORTHO05D007031 4.2e-16 90.5 51 88.2
PRCOL_00000753 Prasinoderma coloniale HOM05D018879 ORTHO05D018932 7.8e-10 69.7 111 35.1
Medtr7g112660 Medicago truncatula HOM05D005743 ORTHO05D007031 1.2e-07 62.4 52 67.3
MCO02G055 Micromonas commoda HOM05D018879 ORTHO05D018932 1.2e-07 62.4 190 29.5
MCO03G398 Micromonas commoda HOM05D018879 ORTHO05D018932 3.1e-06 57.8 111 33.3
Medtr3g062620 Medicago truncatula HOM05D005743 ORTHO05D007031 8.9e-06 56.2 40 72.5
MCO14G031 Micromonas commoda HOM05D018879 ORTHO05D018932 8.9e-06 56.2 443 24.6
MCO14G228 Micromonas commoda HOM05D018879 ORTHO05D018932 8.9e-06 56.2 443 24.6

Acer truncatum (1 genes)
Actinidia chinensis (4 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (2 genes)
Anthoceros agrestis (2 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (0 genes)
Beta vulgaris (2 genes)
Brassica carinata (1 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (2 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (3 genes)
Eucalyptus grandis (2 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (3 genes)
Micromonas commoda (4 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (5 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (2 genes)
Papaver somniferum (2 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (2 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (2 genes)
Salix brachista (1 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (2 genes)
Sequoiadendron giganteum (4 genes)
Simmondsia chinensis (2 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (0 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (3 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings