Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Gene Selection
Species Selection

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
CSS0022710	Camellia sinensis var. sinensis	HOM05D001837	ORTHO05D024694	5.9e-46	187.2	95	100.0
CSS0019028	Camellia sinensis var. sinensis	HOM05D006266	ORTHO05D024694	2.4e-31	138.7	95	81.1
CSS0008442	Camellia sinensis var. sinensis	HOM05D006266	ORTHO05D024694	2.3e-26	122.1	108	66.7
CSS0022444	Camellia sinensis var. sinensis	HOM05D006266	ORTHO05D024694	2.3e-26	122.1	108	66.7
Dinv38727	Davidia involucrata	HOM05D001837	ORTHO05D003156	8.3e-08	60.5	48	62.5
BcaB03g14479	Brassica carinata	HOM05D001837	ORTHO05D003156	1.4e-07	59.7	47	61.7
Zm00001eb165510	Zea mays	HOM05D001837	ORTHO05D003156	1.8e-07	59.3	53	60.4
Sp1g16760	Schrenkiella parvula	HOM05D001837	ORTHO05D003156	2.4e-07	58.9	47	61.7
TAR622G0453	Trochodendron aralioides	HOM05D001837	ORTHO05D003156	4.1e-07	58.2	54	59.3
CiPaw.06G086700	Carya illinoinensis	HOM05D001837	ORTHO05D003156	5.4e-07	57.8	36	77.8
CSS0026210	Camellia sinensis var. sinensis	HOM05D001837	ORTHO05D003156	7.0e-07	57.4	28	96.4
Os11g0658700	Oryza sativa ssp. japonica	HOM05D001837	ORTHO05D003156	7.0e-07	57.4	28	96.4
HPP92_011255	Vanilla planifolia	HOM05D001837	ORTHO05D003156	7.0e-07	57.4	28	96.4
TPR.G39192	Trifolium pratense	HOM05D001837	ORTHO05D024694	9.2e-07	57.0	32	81.2
A08p30230	Brassica napus	HOM05D001837	ORTHO05D003156	1.2e-06	56.6	29	89.7
AL1G31230	Arabidopsis lyrata	HOM05D001837	ORTHO05D003156	1.6e-06	56.2	29	89.7
AT1G18750	Arabidopsis thaliana	HOM05D001837	ORTHO05D003156	1.6e-06	56.2	29	89.7
Carub.0001s1840	Capsella rubella	HOM05D001837	ORTHO05D003156	1.6e-06	56.2	29	89.7
CARHR019390	Cardamine hirsuta	HOM05D001837	ORTHO05D003156	1.6e-06	56.2	29	89.7
Cfa018926	Carpinus fangiana	HOM05D001837	ORTHO05D003156	1.6e-06	56.2	28	92.9
Ciclev10020575m.g	Citrus clementina	HOM05D001837	ORTHO05D003156	1.6e-06	56.2	28	92.9
MBI05_g10771_MAGBIO	Magnolia biondii	HOM05D001837	ORTHO05D003156	1.6e-06	56.2	28	92.9
Nn3g17279	Nelumbo nucifera	HOM05D001837	ORTHO05D003156	1.6e-06	56.2	28	92.9
BcaB03g12962	Brassica carinata	HOM05D001837	ORTHO05D003156	2.0e-06	55.8	30	83.3
Hma1.2p1_1619F.1_g293930	Hydrangea macrophylla	HOM05D001837	ORTHO05D003156	2.0e-06	55.8	28	89.3
Prupe.5G195000	Prunus persica	HOM05D004915	ORTHO05D006048	2.0e-06	55.8	38	63.2
PGR083G0186	Punica granatum	HOM05D001837	ORTHO05D003156	2.0e-06	55.8	28	89.3
Actinidia37619	Actinidia chinensis	HOM05D001837	ORTHO05D003156	2.7e-06	55.5	28	92.9
Dinv16662	Davidia involucrata	HOM05D001837	ORTHO05D003156	2.7e-06	55.5	28	89.3
Manes.14G079700	Manihot esculenta	HOM05D001837	ORTHO05D003156	2.7e-06	55.5	29	86.2
Thecc.03G090700	Theobroma cacao	HOM05D001837	ORTHO05D003156	2.7e-06	55.5	28	89.3
GSVIVG01007989001	Vitis vinifera	HOM05D001837	ORTHO05D003156	2.7e-06	55.5	28	89.3
Actinidia04882	Actinidia chinensis	HOM05D001837	ORTHO05D003156	3.5e-06	55.1	28	92.9
arahy.Tifrunner.gnm1.ann1.K1S2P8	Arachis hypogaea	HOM05D001837	ORTHO05D003156	3.5e-06	55.1	28	92.9
arahy.Tifrunner.gnm1.ann1.U9RCFT	Arachis hypogaea	HOM05D001837	ORTHO05D003156	3.5e-06	55.1	28	92.9
Gohir.A12G178400	Gossypium hirsutum	HOM05D001837	ORTHO05D003156	3.5e-06	55.1	28	89.3
Gohir.D12G180800	Gossypium hirsutum	HOM05D001837	ORTHO05D003156	3.5e-06	55.1	28	89.3
Gorai.008G194100	Gossypium raimondii	HOM05D001837	ORTHO05D003156	3.5e-06	55.1	28	89.3
SEGI_40155	Sequoiadendron giganteum	HOM05D001837	ORTHO05D003156	3.5e-06	55.1	28	89.3
Actinidia27081	Actinidia chinensis	HOM05D006266	ORTHO05D008016	4.5e-06	54.7	28	92.9
Aa31LG7G3540	Aethionema arabicum	HOM05D001837	ORTHO05D003156	4.5e-06	54.7	29	86.2
Aqoxy3G03432	Aquilegia oxysepala	HOM05D001837	ORTHO05D003156	4.5e-06	54.7	28	89.3
arahy.Tifrunner.gnm1.ann1.GD5YP7	Arachis hypogaea	HOM05D001837	ORTHO05D003156	4.5e-06	54.7	28	89.3
arahy.Tifrunner.gnm1.ann1.PIZ1S4	Arachis hypogaea	HOM05D001837	ORTHO05D003156	4.5e-06	54.7	28	89.3
A09p59690	Brassica napus	HOM05D001837	ORTHO05D003156	4.5e-06	54.7	29	86.2
C08p18910	Brassica napus	HOM05D001837	ORTHO05D003156	4.5e-06	54.7	29	86.2
BolC5t30412H	Brassica oleracea	HOM05D001837	ORTHO05D003156	4.5e-06	54.7	29	86.2
BolC8t49515H	Brassica oleracea	HOM05D001837	ORTHO05D003156	4.5e-06	54.7	29	86.2
BolC8t51858H	Brassica oleracea	HOM05D001837	ORTHO05D003156	4.5e-06	54.7	29	86.2
BraA08t34956Z	Brassica rapa	HOM05D001837	ORTHO05D003156	4.5e-06	54.7	29	86.2
BraA09t41346Z	Brassica rapa	HOM05D001837	ORTHO05D003156	4.5e-06	54.7	29	86.2
Haze_07310	Corylus avellana	HOM05D001837	ORTHO05D003156	4.5e-06	54.7	28	89.3
Haze_11995	Corylus avellana	HOM05D001837	ORTHO05D003156	4.5e-06	54.7	28	89.3
Eucgr.B00522	Eucalyptus grandis	HOM05D001837	ORTHO05D003156	4.5e-06	54.7	28	89.3
Nn4g23208	Nelumbo nucifera	HOM05D001837	ORTHO05D003156	4.5e-06	54.7	28	89.3
Nn4g23210	Nelumbo nucifera	HOM05D001837	ORTHO05D003156	4.5e-06	54.7	28	89.3
PSO013G0078	Papaver somniferum	HOM05D001837	ORTHO05D003156	4.5e-06	54.7	28	89.3
THA.LOC104813882	Tarenaya hassleriana	HOM05D001837	ORTHO05D003156	4.5e-06	54.7	29	86.2
CSS0046922	Camellia sinensis var. sinensis	HOM05D001837	ORTHO05D003156	5.9e-06	54.3	28	89.3
CANSAT80G2286	Cannabis sativa	HOM05D001837	ORTHO05D003156	5.9e-06	54.3	28	89.3
CiPaw.05G133000	Carya illinoinensis	HOM05D001837	ORTHO05D003156	5.9e-06	54.3	28	85.7
Ciclev10031963m.g	Citrus clementina	HOM05D001837	ORTHO05D003156	5.9e-06	54.3	28	85.7
Glyma.17G101300	Glycine max	HOM05D001837	ORTHO05D003156	5.9e-06	54.3	28	89.3
Lsat_1_v5_gn_9_27060	Lactuca sativa	HOM05D001837	ORTHO05D003156	5.9e-06	54.3	28	89.3
Lj4g0007316	Lotus japonicus	HOM05D001837	ORTHO05D003156	5.9e-06	54.3	28	89.3
Lalb_Chr10g0098411	Lupinus albus	HOM05D001837	ORTHO05D003156	5.9e-06	54.3	28	85.7
Medtr4g108720	Medicago truncatula	HOM05D001837	ORTHO05D003156	5.9e-06	54.3	28	89.3
Medtr5g041650	Medicago truncatula	HOM05D001837	ORTHO05D003156	5.9e-06	54.3	28	89.3
Phvul.003G189100	Phaseolus vulgaris	HOM05D001837	ORTHO05D003156	5.9e-06	54.3	28	89.3
Psat4g050040	Pisum sativum	HOM05D001837	ORTHO05D003156	5.9e-06	54.3	28	89.3
TPR.G9249	Trifolium pratense	HOM05D001837	ORTHO05D003156	5.9e-06	54.3	28	89.3
A06p14890	Brassica napus	HOM05D001837	ORTHO05D003156	7.8e-06	53.9	29	82.8
Cpa.g.sc1.45	Carica papaya	HOM05D001837	ORTHO05D003156	7.8e-06	53.9	28	85.7
Gohir.A03G101800	Gossypium hirsutum	HOM05D001837	ORTHO05D003156	7.8e-06	53.9	28	89.3
Gohir.A13G076400	Gossypium hirsutum	HOM05D001837	ORTHO05D003156	7.8e-06	53.9	28	89.3
Gohir.D02G126600	Gossypium hirsutum	HOM05D001837	ORTHO05D003156	7.8e-06	53.9	28	89.3
Gohir.D13G076000	Gossypium hirsutum	HOM05D001837	ORTHO05D003156	7.8e-06	53.9	28	89.3
Gorai.005G142100	Gossypium raimondii	HOM05D001837	ORTHO05D003156	7.8e-06	53.9	28	89.3
Gorai.013G086600	Gossypium raimondii	HOM05D001837	ORTHO05D003156	7.8e-06	53.9	28	89.3
MD16G1070700	Malus domestica	HOM05D001837	ORTHO05D003156	7.8e-06	53.9	80	48.8
Hund02639	Selenicereus undatus	HOM05D001837	ORTHO05D003156	7.8e-06	53.9	28	85.7

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm

Tree construction algorithm

Edit MSA alignment

Interactive Phylogenetics Module

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