Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022679 Camellia sinensis var. sinensis HOM05D004908 ORTHO05D006418 9.0e-190 666.8 337 100.0
Dinv17436 Davidia involucrata HOM05D004908 ORTHO05D006418 6.7e-137 491.1 343 72.3
Hma1.2p1_0060F.1_g032940 Hydrangea macrophylla HOM05D004908 ORTHO05D006418 1.2e-120 437.2 346 67.9
Rhsim08G0143800 Rhododendron simsii HOM05D004908 ORTHO05D006418 2.0e-120 436.4 379 63.3
GSVIVG01008119001 Vitis vinifera HOM05D004908 ORTHO05D006418 1.2e-117 427.2 336 65.5
MD14G1214000 Malus domestica HOM05D004908 ORTHO05D006418 8.0e-106 387.9 354 61.0
Prupe.5G207300 Prunus persica HOM05D004908 ORTHO05D006418 3.4e-104 382.5 351 59.8
TAR371G0785 Trochodendron aralioides HOM05D004908 ORTHO05D006418 1.9e-102 376.7 339 59.3
Thecc.03G001900 Theobroma cacao HOM05D004908 ORTHO05D006418 7.0e-102 374.8 344 58.7
Cfa019355 Carpinus fangiana HOM05D004908 ORTHO05D006418 8.6e-100 367.9 345 60.0
CiPaw.12G009100 Carya illinoinensis HOM05D004908 ORTHO05D006418 1.9e-99 366.7 346 57.8
Cc00_g03370 Coffea canephora HOM05D004908 ORTHO05D006418 3.4e-96 355.9 341 58.7
FvH4_5g13640 Fragaria vesca HOM05D004908 ORTHO05D006418 3.4e-96 355.9 349 55.6
QL10p019966 Quercus lobata HOM05D004908 ORTHO05D006418 9.8e-96 354.4 349 56.2
Haze_07746 Corylus avellana HOM05D004908 ORTHO05D006418 1.3e-95 354.0 374 55.3
CANSAT80G1354 Cannabis sativa HOM05D004908 ORTHO05D006418 3.7e-95 352.4 340 53.8
Hund02570 Selenicereus undatus HOM05D004908 ORTHO05D006418 3.7e-95 352.4 342 56.4
Nn4g23471 Nelumbo nucifera HOM05D004908 ORTHO05D006418 8.3e-95 351.3 340 57.1
RcHm_v2.0_Chr7g0183321 Rosa chinensis HOM05D004908 ORTHO05D006418 8.3e-95 351.3 343 56.6
Sed0013495 Sechium edule HOM05D004908 ORTHO05D006418 3.5e-93 345.9 287 63.4
Ciclev10021158m.g Citrus clementina HOM05D004908 ORTHO05D006418 7.8e-93 344.7 340 56.2
CsaV3_1G006120 Cucumis sativus L. HOM05D004908 ORTHO05D006418 2.3e-92 343.2 343 56.6
Duzib068G0428 Durio zibethinus HOM05D004908 ORTHO05D006418 6.6e-92 341.7 346 54.6
Manes.14G087300 Manihot esculenta HOM05D004908 ORTHO05D006418 6.6e-92 341.7 354 53.7
Gohir.A12G276800 Gossypium hirsutum HOM05D004908 ORTHO05D006418 1.1e-91 340.9 345 56.2
Cpa.g.sc94.75 Carica papaya HOM05D004908 ORTHO05D006418 1.5e-91 340.5 347 53.9
Gorai.008G298500 Gossypium raimondii HOM05D004908 ORTHO05D006418 5.6e-91 338.6 347 55.6
Lsat_1_v5_gn_5_22901 Lactuca sativa HOM05D004908 ORTHO05D006418 5.6e-91 338.6 349 54.4
Oeu032097.2 Olea europaea HOM05D004908 ORTHO05D006418 7.3e-91 338.2 371 55.3
BolC5t30387H Brassica oleracea HOM05D004908 ORTHO05D006418 2.1e-90 336.7 318 57.5
Eucgr.B00624 Eucalyptus grandis HOM05D004908 ORTHO05D006418 4.7e-90 335.5 253 66.0
Potri.006G227300 Populus trichocarpa HOM05D004908 ORTHO05D006418 4.7e-90 335.5 341 55.4
HanXRQChr05g0153521 Helianthus annuus HOM05D004908 ORTHO05D006418 1.4e-89 334.0 317 55.5
AT1G18600 Arabidopsis thaliana HOM05D004908 ORTHO05D006418 2.3e-89 333.2 329 56.8
BcaB07g31879 Brassica carinata HOM05D004908 ORTHO05D006418 2.3e-89 333.2 318 57.2
TWI81G0201 Tripterygium wilfordii HOM05D004908 ORTHO05D006418 2.3e-89 333.2 340 57.1
Aqoxy3G03654 Aquilegia oxysepala HOM05D004908 ORTHO05D006418 3.1e-89 332.8 330 53.3
A06p14680 Brassica napus HOM05D004908 ORTHO05D006418 3.1e-89 332.8 329 55.0
BraA06t24593Z Brassica rapa HOM05D004908 ORTHO05D006418 3.1e-89 332.8 329 55.0
AL1G31040 Arabidopsis lyrata HOM05D004908 ORTHO05D006418 5.2e-89 332.0 330 57.3
BcaC05g25755 Brassica carinata HOM05D004908 ORTHO05D006418 6.8e-89 331.6 327 56.3
C05p16860 Brassica napus HOM05D004908 ORTHO05D006418 6.8e-89 331.6 327 56.3
Peaxi162Scf01223g00009 Petunia axillaris HOM05D004908 ORTHO05D006418 1.2e-88 330.9 348 54.9
Prupe.5G207200 Prunus persica HOM05D004908 ORTHO05D006418 2.0e-88 330.1 345 52.2
ClCG04G011680 Citrullus lanatus HOM05D004908 ORTHO05D006418 3.4e-88 329.3 342 54.7
Lj9C439G11 Lonicera japonica HOM05D004908 ORTHO05D006418 5.8e-88 328.6 211 75.4
Carub.0001s1823 Capsella rubella HOM05D004908 ORTHO05D006418 7.6e-88 328.2 323 57.6
Atru.chr9.517 Acer truncatum HOM05D004908 ORTHO05D006418 1.3e-87 327.4 342 55.6
Sopen12g018880 Solanum pennellii HOM05D004908 ORTHO05D006418 1.7e-87 327.0 342 53.8
Thhalv10008142m.g Eutrema salsugineum HOM05D004908 ORTHO05D006418 2.9e-87 326.2 321 55.8
Gohir.D12G277800 Gossypium hirsutum HOM05D004908 ORTHO05D006418 8.4e-87 324.7 273 61.2
Sabra06G0175900 Salix brachista HOM05D004908 ORTHO05D006418 8.4e-87 324.7 341 54.5
MSTRG.9592 Avicennia marina HOM05D004908 ORTHO05D006418 1.1e-86 324.3 339 53.4
AUR62039652 Chenopodium quinoa HOM05D004908 ORTHO05D006418 1.9e-86 323.6 340 54.4
CARHR019220 Cardamine hirsuta HOM05D004908 ORTHO05D006418 7.1e-86 321.6 318 55.0
Ah.11g047620 Amaranthus hybridus HOM05D004908 ORTHO05D006418 9.2e-86 321.2 303 56.1
Glyma.05G019500 Glycine max HOM05D004908 ORTHO05D006418 1.2e-85 320.9 343 54.2
Phvul.003G183300 Phaseolus vulgaris HOM05D004908 ORTHO05D006418 1.2e-85 320.9 330 54.8
Sp1g16570 Schrenkiella parvula HOM05D004908 ORTHO05D006418 1.0e-84 317.8 316 56.0
ECA246G3883 Erigeron canadensis HOM05D004908 ORTHO05D006418 5.1e-84 315.5 264 61.0
SGA_v2.0_scaffold51G18774 Striga asiatica HOM05D004908 ORTHO05D006418 7.3e-83 311.6 359 49.6
VMungo1215G2693 Vigna mungo HOM05D004908 ORTHO05D006418 6.2e-82 308.5 308 54.5
AUR62021531 Chenopodium quinoa HOM05D004908 ORTHO05D006418 8.1e-82 308.1 306 54.9
Nitab4.5_0001797g0080 Nicotiana tabacum HOM05D004908 ORTHO05D006418 8.9e-81 304.7 361 50.4
Aa31LG7G3360 Aethionema arabicum HOM05D004908 ORTHO05D006418 1.2e-80 304.3 335 51.3
THA.LOC104808039 Tarenaya hassleriana HOM05D004908 ORTHO05D006418 2.0e-80 303.5 299 56.5
Migut.D01626 Erythranthe guttata HOM05D004908 ORTHO05D006418 2.6e-80 303.1 317 53.6
MELO3C002041.2 Cucumis melo HOM05D004908 ORTHO05D006418 5.8e-80 302.0 313 56.9
Medtr4g109700 Medicago truncatula HOM05D004908 ORTHO05D006418 2.2e-79 300.1 323 51.7
Lalb_Chr07g0178341 Lupinus albus HOM05D004908 ORTHO05D006418 2.4e-78 296.6 313 54.6
EL10Ac5g11159 Beta vulgaris HOM05D004908 ORTHO05D006418 5.4e-78 295.4 211 69.2
arahy.Tifrunner.gnm1.ann1.J6BFMQ Arachis hypogaea HOM05D004908 ORTHO05D006418 1.2e-77 294.3 331 52.6
arahy.Tifrunner.gnm1.ann1.PAN20U Arachis hypogaea HOM05D004908 ORTHO05D006418 1.2e-77 294.3 331 52.6
TPR.G1983 Trifolium pratense HOM05D004908 ORTHO05D006418 2.5e-75 286.6 224 64.3
Lj4g0028183 Lotus japonicus HOM05D004908 ORTHO05D006418 3.3e-75 286.2 216 65.3
Manes.14G087101 Manihot esculenta HOM05D004908 ORTHO05D006418 4.8e-74 282.3 349 45.6
PSO478G4625 Papaver somniferum HOM05D004908 ORTHO05D006418 3.4e-72 276.2 263 55.5
FAN13G1921 Fragaria x ananassa HOM05D004908 ORTHO05D006418 5.8e-72 275.4 349 47.6
FAN08G1663 Fragaria x ananassa HOM05D004908 ORTHO05D006418 2.2e-71 273.5 349 47.6
Sc04g0004310 Simmondsia chinensis HOM05D004908 ORTHO05D006418 2.9e-71 273.1 279 53.4
vmacro17622 Vaccinium macrocarpon HOM05D004908 ORTHO05D006418 8.4e-71 271.6 217 70.5
unitig_699.g19027 Utricularia gibba HOM05D004908 ORTHO05D006418 1.9e-70 270.4 208 63.5
Nitab4.5_0006506g0020 Nicotiana tabacum HOM05D004908 ORTHO05D006418 2.4e-70 270.0 213 64.3
MBI16_g10851_MAGBIO Magnolia biondii HOM05D004908 ORTHO05D006418 3.9e-68 262.7 344 45.9
DCAR_011562 Daucus carota HOM05D004908 ORTHO05D006418 6.6e-68 261.9 309 49.5
Duzib205G0531 Durio zibethinus HOM05D004908 ORTHO05D006418 1.9e-67 260.4 211 59.2
SHI17490 Sapria himalayana HOM05D004908 ORTHO05D006418 7.4e-67 258.5 207 63.8
CDE07G0469 Ceratophyllum demersum HOM05D004908 ORTHO05D006418 2.8e-66 256.5 278 47.5
FAN13G3071 Fragaria x ananassa HOM05D004908 ORTHO05D006418 4.8e-66 255.8 297 50.5
FAN08G0411 Fragaria x ananassa HOM05D004908 ORTHO05D006418 1.1e-65 254.6 336 48.5
SalBow7G1843 Salvia bowleyana HOM05D004908 ORTHO05D006418 5.3e-65 252.3 329 44.4
FAN18G1888 Fragaria x ananassa HOM05D004908 ORTHO05D006418 2.0e-64 250.4 346 45.7
Actinidia04812 Actinidia chinensis HOM05D004908 ORTHO05D006418 2.6e-64 250.0 210 63.3
PSO017G5063 Papaver somniferum HOM05D004908 ORTHO05D006418 2.1e-61 240.4 206 61.2
PSO017G6704 Papaver somniferum HOM05D004908 ORTHO05D006418 2.7e-61 240.0 206 60.7
PGR083G2541 Punica granatum HOM05D004908 ORTHO05D006418 6.0e-61 238.8 276 47.1
Os01g0763100 Oryza sativa ssp. japonica HOM05D004908 ORTHO05D006418 3.3e-59 233.0 208 55.3
FAN13G1644 Fragaria x ananassa HOM05D004908 ORTHO05D006418 6.5e-55 218.8 206 58.7
HPP92_019201 Vanilla planifolia HOM05D004908 ORTHO05D006418 2.1e-53 213.8 209 51.2
AL2G34040 Arabidopsis lyrata HOM05D004908 ORTHO05D006418 8.7e-52 208.4 276 43.5
ATR0827G189 Amborella trichopoda HOM05D004908 ORTHO05D006418 1.5e-51 207.6 195 56.4
PSO017G2617 Papaver somniferum HOM05D004908 ORTHO05D006418 4.3e-51 206.1 222 50.5
Prupe.3G124800 Prunus persica HOM05D004908 ORTHO05D006418 2.1e-50 203.8 355 39.7
AT1G74130 Arabidopsis thaliana HOM05D004908 ORTHO05D006418 4.8e-50 202.6 278 41.7
CARHR067290 Cardamine hirsuta HOM05D004908 ORTHO05D006418 9.0e-49 198.4 304 40.8
SalBow7G0217 Salvia bowleyana HOM05D004908 ORTHO05D006418 3.4e-48 196.4 227 48.9
Pp3c22_7870 Physcomitrium patens HOM05D004908 ORTHO05D006418 1.0e-47 194.9 198 50.0
Carub.0002s2094 Capsella rubella HOM05D004908 ORTHO05D006418 2.2e-47 193.7 278 42.4
FvH4_5g13620 Fragaria vesca HOM05D004908 ORTHO05D006418 8.4e-47 191.8 161 60.9
Zm00001eb370410 Zea mays HOM05D004908 ORTHO05D006418 5.5e-46 189.1 180 53.3
Gohir.D10G255500 Gossypium hirsutum HOM05D004908 ORTHO05D006418 9.3e-46 188.3 133 71.4
SalBow7G4422 Salvia bowleyana HOM05D004908 ORTHO05D006418 1.6e-45 187.6 348 36.8
BraA07t31547Z Brassica rapa HOM05D003320 ORTHO05D003941 4.6e-45 186.0 291 37.8
A07p40020 Brassica napus HOM05D003320 ORTHO05D003941 2.3e-44 183.7 279 40.1
Psat0s3566g0040 Pisum sativum HOM05D004908 ORTHO05D006418 1.9e-43 180.6 234 44.0
Thhalv10019561m.g Eutrema salsugineum HOM05D004908 ORTHO05D006418 7.4e-43 178.7 307 39.1
BcaC08g46817 Brassica carinata HOM05D004908 ORTHO05D006418 9.7e-43 178.3 320 36.2
Solyc12g038600.2 Solanum lycopersicum HOM05D004908 ORTHO05D006418 9.7e-43 178.3 133 66.9
RcHm_v2.0_Chr1g0346931 Rosa chinensis HOM05D004908 ORTHO05D006418 1.3e-42 177.9 123 74.8
Carub.0002s2095 Capsella rubella HOM05D004908 ORTHO05D006418 2.2e-42 177.2 249 43.0
Actinidia13428 Actinidia chinensis HOM05D004908 ORTHO05D006418 3.7e-42 176.4 101 88.1
AagrBONN_evm.TU.Sc2ySwM_368.1628 Anthoceros agrestis HOM05D004908 ORTHO05D006418 3.1e-41 173.3 210 44.8
Mapoly0086s0048 Marchantia polymorpha HOM05D004908 ORTHO05D006418 1.2e-40 171.4 198 48.0
BolC6t39860H Brassica oleracea HOM05D004908 ORTHO05D006418 4.5e-40 169.5 232 39.2
SalBow7G4769 Salvia bowleyana HOM05D004908 ORTHO05D006418 1.7e-39 167.5 351 37.3
Glyma.17G080300 Glycine max HOM05D004908 ORTHO05D006418 7.2e-38 162.2 172 54.7
BcaC08g46813 Brassica carinata HOM05D004908 ORTHO05D006418 2.1e-37 160.6 232 38.4
C06p48280 Brassica napus HOM05D004908 ORTHO05D006418 2.7e-37 160.2 198 40.4
C06p48290 Brassica napus HOM05D003320 ORTHO05D003941 3.9e-36 156.4 293 36.2
Solyc12g038590.2 Solanum lycopersicum HOM05D004908 ORTHO05D006418 1.1e-35 154.8 218 45.0
vmacro17623 Vaccinium macrocarpon HOM05D004908 ORTHO05D006418 1.1e-35 154.8 93 83.9
AT1G74140 Arabidopsis thaliana HOM05D004908 ORTHO05D006418 1.5e-35 154.5 303 36.0
BcaC08g46846 Brassica carinata HOM05D003320 ORTHO05D003941 2.5e-35 153.7 277 37.9
MCO07G692 Micromonas commoda HOM05D004908 ORTHO05D006418 9.7e-35 151.8 221 39.4
SEGI_05482 Sequoiadendron giganteum HOM05D004908 ORTHO05D006418 1.7e-34 151.0 143 56.6
RcHm_v2.0_Chr6g0258631 Rosa chinensis HOM05D004908 ORTHO05D006418 3.8e-31 139.8 121 58.7
RcHm_v2.0_Chr7g0183341 Rosa chinensis HOM05D004908 ORTHO05D006418 5.1e-28 129.4 116 52.6
Gohir.A06G087200 Gossypium hirsutum HOM05D004908 ORTHO05D006418 4.1e-25 119.8 73 72.6
RcHm_v2.0_Chr6g0258651 Rosa chinensis HOM05D004908 ORTHO05D006418 4.1e-25 119.8 75 81.3
HPP92_019191 Vanilla planifolia HOM05D004908 ORTHO05D006418 4.1e-25 119.8 115 50.4
RcHm_v2.0_Chr1g0346941 Rosa chinensis HOM05D004908 ORTHO05D006418 3.0e-20 103.6 70 64.3
Dinv17434 Davidia involucrata HOM05D004908 ORTHO05D006418 9.7e-19 98.6 88 63.6
BolC6t39863H Brassica oleracea HOM05D004908 ORTHO05D039080 2.2e-18 97.4 294 33.0
CBR_g24070 Chara braunii HOM05D000019 ORTHO05D000002 2.0e-16 90.9 107 38.3
FvH4_5g13610 Fragaria vesca HOM05D004908 ORTHO05D006418 1.3e-15 88.2 73 65.8
BcaC08g46819 Brassica carinata HOM05D004908 ORTHO05D039080 9.4e-14 82.0 220 31.8
Gohir.A07G149500 Gossypium hirsutum HOM05D004908 ORTHO05D006418 4.8e-10 69.7 43 69.8
RcHm_v2.0_Chr6g0263661 Rosa chinensis HOM05D004908 ORTHO05D006418 4.2e-06 56.6 41 58.5

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (3 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (6 genes)
Brassica napus (5 genes)
Brassica oleracea (3 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (3 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (2 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (0 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (2 genes)
Fragaria vesca (3 genes)
Fragaria x ananassa (6 genes)
Glycine max (2 genes)
Gossypium hirsutum (5 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (4 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (3 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (7 genes)
Salix brachista (1 genes)
Salvia bowleyana (4 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (0 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (2 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings