Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022164 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 1.2e-55 219.5 110 100.0
CSS0011379 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 1.4e-54 216.1 110 99.1
Dinv28347 Davidia involucrata HOM05D004948 ORTHO05D005824 9.9e-21 103.6 93 63.4
Oeu037114.1 Olea europaea HOM05D004948 ORTHO05D005824 9.9e-21 103.6 104 60.6
vmacro06582 Vaccinium macrocarpon HOM05D004948 ORTHO05D005824 9.9e-21 103.6 108 60.2
Hma1.2p1_0142F.1_g064080 Hydrangea macrophylla HOM05D004948 ORTHO05D005824 1.3e-20 103.2 106 60.4
Actinidia34187 Actinidia chinensis HOM05D004948 ORTHO05D005824 2.9e-20 102.1 91 63.7
Rhsim03G0197700 Rhododendron simsii HOM05D004948 ORTHO05D005824 6.4e-20 100.9 95 62.1
CSS0007759 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 3.2e-19 98.6 86 61.6
Dinv35301 Davidia involucrata HOM05D004948 ORTHO05D005824 3.2e-19 98.6 112 56.2
TAR636G2931 Trochodendron aralioides HOM05D004948 ORTHO05D005824 3.2e-19 98.6 103 57.3
COL.COLO4_04803 Corchorus olitorius HOM05D004948 ORTHO05D005824 2.7e-18 95.5 103 51.5
GSVIVG01028728001 Vitis vinifera HOM05D004948 ORTHO05D005824 1.0e-17 93.6 91 54.9
PGR083G1298 Punica granatum HOM05D004948 ORTHO05D005824 1.7e-17 92.8 101 52.5
MSTRG.65 Avicennia marina HOM05D004948 ORTHO05D005824 2.3e-17 92.4 96 57.3
Lj3A912T42 Lonicera japonica HOM05D004948 ORTHO05D005824 8.7e-17 90.5 103 51.5
SGA_v2.0_scaffold10G05268 Striga asiatica HOM05D004948 ORTHO05D005824 1.1e-16 90.1 71 70.4
Cpa.g.sc3.41 Carica papaya HOM05D004948 ORTHO05D005824 1.5e-16 89.7 104 52.9
SalBow2G2244 Salvia bowleyana HOM05D004948 ORTHO05D005824 1.5e-16 89.7 91 58.2
TAR629G2953 Trochodendron aralioides HOM05D004948 ORTHO05D005824 1.5e-16 89.7 103 55.3
Thecc.03G191700 Theobroma cacao HOM05D004948 ORTHO05D005824 5.6e-16 87.8 103 46.6
Solyc03g007480.3 Solanum lycopersicum HOM05D004948 ORTHO05D005824 7.3e-16 87.4 91 59.3
Sopen03g003430 Solanum pennellii HOM05D004948 ORTHO05D005824 7.3e-16 87.4 91 59.3
CAN.G108.18 Capsicum annuum HOM05D004948 ORTHO05D005824 2.1e-15 85.9 66 65.2
Ciclev10005800m.g Citrus clementina HOM05D004948 ORTHO05D005824 3.6e-15 85.1 103 46.6
Sed0002242 Sechium edule HOM05D004948 ORTHO05D005824 3.6e-15 85.1 79 60.8
PGSC0003DMG400009097 Solanum tuberosum HOM05D004948 ORTHO05D005824 3.6e-15 85.1 91 59.3
Duzib068G0205 Durio zibethinus HOM05D004948 ORTHO05D005824 4.7e-15 84.7 103 44.7
Migut.F01058 Erythranthe guttata HOM05D004948 ORTHO05D005824 4.7e-15 84.7 97 51.5
MD07G1283800 Malus domestica HOM05D004948 ORTHO05D005824 4.7e-15 84.7 112 46.4
Nitab4.5_0001331g0180 Nicotiana tabacum HOM05D004948 ORTHO05D005824 4.7e-15 84.7 103 53.4
PGR042G1790 Punica granatum HOM05D004948 ORTHO05D005824 4.7e-15 84.7 65 64.6
ClCG01G000640 Citrullus lanatus HOM05D004948 ORTHO05D005824 6.2e-15 84.3 83 57.8
Gohir.D12G253100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 1.1e-14 83.6 63 65.1
Gorai.008G271400 Gossypium raimondii HOM05D004948 ORTHO05D005824 1.1e-14 83.6 63 65.1
QL09p011186 Quercus lobata HOM05D004948 ORTHO05D005824 1.4e-14 83.2 103 49.5
CiPaw.06G006800 Carya illinoinensis HOM05D004948 ORTHO05D005824 1.8e-14 82.8 106 47.2
Gohir.A12G252400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 1.8e-14 82.8 82 53.7
Atru.chr1.284 Acer truncatum HOM05D004948 ORTHO05D005824 2.4e-14 82.4 107 48.6
CANSAT21G0873 Cannabis sativa HOM05D004948 ORTHO05D005824 2.4e-14 82.4 90 51.1
Manes.06G156200 Manihot esculenta HOM05D004948 ORTHO05D005824 2.4e-14 82.4 91 51.6
PGSC0003DMG400028892 Solanum tuberosum HOM05D004948 ORTHO05D005824 2.4e-14 82.4 108 50.9
CsaV3_5G000730 Cucumis sativus L. HOM05D004948 ORTHO05D005824 3.1e-14 82.0 87 54.0
FAN03G1348 Fragaria x ananassa HOM05D004948 ORTHO05D005824 3.1e-14 82.0 95 49.5
Nitab4.5_0000472g0200 Nicotiana tabacum HOM05D004948 ORTHO05D005824 3.1e-14 82.0 103 53.4
Duzib084G1367 Durio zibethinus HOM05D004948 ORTHO05D005824 4.0e-14 81.6 91 46.2
Haze_00103 Corylus avellana HOM05D004948 ORTHO05D005824 6.9e-14 80.9 91 48.4
MELO3C005865.2 Cucumis melo HOM05D004948 ORTHO05D005824 1.5e-13 79.7 87 52.9
Duzib205G0398 Durio zibethinus HOM05D004948 ORTHO05D005824 2.6e-13 79.0 103 45.6
Nn2g13651 Nelumbo nucifera HOM05D004948 ORTHO05D005824 2.6e-13 79.0 67 64.2
FAN01G0333 Fragaria x ananassa HOM05D004948 ORTHO05D005824 4.4e-13 78.2 103 46.6
MD01G1214200 Malus domestica HOM05D004948 ORTHO05D005824 5.8e-13 77.8 110 45.5
Cfa016354 Carpinus fangiana HOM05D004948 ORTHO05D005824 7.6e-13 77.4 91 47.3
FAN06G2108 Fragaria x ananassa HOM05D004948 ORTHO05D005824 7.6e-13 77.4 103 46.6
FAN10G0476 Fragaria x ananassa HOM05D004948 ORTHO05D005824 7.6e-13 77.4 103 46.6
Solyc06g051820.4 Solanum lycopersicum HOM05D004948 ORTHO05D005824 7.6e-13 77.4 105 50.5
FAN06G4897 Fragaria x ananassa HOM05D004948 ORTHO05D005824 1.7e-12 76.3 107 43.9
arahy.Tifrunner.gnm1.ann1.LZU7FF Arachis hypogaea HOM05D004948 ORTHO05D005824 2.2e-12 75.9 69 55.1
arahy.Tifrunner.gnm1.ann1.MD6354 Arachis hypogaea HOM05D004948 ORTHO05D005824 2.2e-12 75.9 69 55.1
FvH4_7g30910 Fragaria vesca HOM05D004948 ORTHO05D005824 2.2e-12 75.9 91 47.3
FAN10G0469 Fragaria x ananassa HOM05D004948 ORTHO05D005824 2.2e-12 75.9 103 45.6
Sopen06g017830 Solanum pennellii HOM05D004948 ORTHO05D005824 8.4e-12 73.9 102 50.0
EL10Ac3g05356 Beta vulgaris HOM05D004948 ORTHO05D005824 1.1e-11 73.6 57 61.4
Lj1g0018821 Lotus japonicus HOM05D004948 ORTHO05D005824 1.4e-11 73.2 91 41.8
Potri.015G023400 Populus trichocarpa HOM05D004948 ORTHO05D005824 1.4e-11 73.2 103 48.5
Glyma.13G040600 Glycine max HOM05D004948 ORTHO05D005824 1.9e-11 72.8 84 44.0
Aqoxy5G04108 Aquilegia oxysepala HOM05D004948 ORTHO05D005824 2.4e-11 72.4 90 50.0
Manes.14G019200 Manihot esculenta HOM05D004948 ORTHO05D005824 2.4e-11 72.4 60 51.7
Prupe.2G306200 Prunus persica HOM05D004948 ORTHO05D005824 2.4e-11 72.4 84 52.4
AUR62031482 Chenopodium quinoa HOM05D004948 ORTHO05D005824 4.2e-11 71.6 49 67.3
Potri.012G033100 Populus trichocarpa HOM05D004948 ORTHO05D005824 4.2e-11 71.6 105 42.9
THA.LOC104800283 Tarenaya hassleriana HOM05D004948 ORTHO05D005824 5.4e-11 71.2 53 67.9
Lsat_1_v5_gn_8_6120 Lactuca sativa HOM05D004948 ORTHO05D005824 7.1e-11 70.9 71 56.3
Peaxi162Scf00904g00460 Petunia axillaris HOM05D004948 ORTHO05D005824 7.1e-11 70.9 59 62.7
Eucgr.A02670 Eucalyptus grandis HOM05D004948 ORTHO05D005824 9.3e-11 70.5 108 42.6
Sabra12G0022300 Salix brachista HOM05D004948 ORTHO05D005824 1.2e-10 70.1 105 42.9
Sc19g0001090 Simmondsia chinensis HOM05D004948 ORTHO05D005824 1.6e-10 69.7 85 45.9
AUR62021051 Chenopodium quinoa HOM05D004948 ORTHO05D005824 3.5e-10 68.6 49 65.3
DCAR_010636 Daucus carota HOM05D004948 ORTHO05D005824 4.6e-10 68.2 108 44.4
ATR1132G055 Amborella trichopoda HOM05D004948 ORTHO05D005824 1.0e-09 67.0 42 69.0
ECA233G3864 Erigeron canadensis HOM05D004948 ORTHO05D005824 1.3e-09 66.6 56 58.9
Aa31sc29G60 Aethionema arabicum HOM05D004948 ORTHO05D005824 8.7e-09 63.9 47 63.8
HanXRQChr13g0392981 Helianthus annuus HOM05D004948 ORTHO05D005824 1.5e-08 63.2 71 49.3
MBI07_g20438_MAGBIO Magnolia biondii HOM05D004948 ORTHO05D005824 1.9e-08 62.8 59 52.5
Hund27721 Selenicereus undatus HOM05D004948 ORTHO05D005824 4.3e-08 61.6 57 56.1
Hund27734 Selenicereus undatus HOM05D004948 ORTHO05D005824 4.3e-08 61.6 57 56.1
Aa31LG5G23580 Aethionema arabicum HOM05D004948 ORTHO05D005824 7.3e-08 60.8 47 61.7
Sp6g15460 Schrenkiella parvula HOM05D004948 ORTHO05D005824 7.3e-08 60.8 91 41.8
Carub.0008s1349 Capsella rubella HOM05D004948 ORTHO05D005824 9.6e-08 60.5 59 52.5
Thhalv10014692m.g Eutrema salsugineum HOM05D004948 ORTHO05D005824 1.3e-07 60.1 59 55.9
TWI23G0483 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 6.2e-07 57.8 56 57.1
Peaxi162Scf00618g00525 Petunia axillaris HOM05D004948 ORTHO05D005824 8.1e-07 57.4 102 40.2
BcaB05g22031 Brassica carinata HOM05D004948 ORTHO05D005824 1.1e-06 57.0 50 56.0
AT5G53310 Arabidopsis thaliana HOM05D004948 ORTHO05D005824 1.4e-06 56.6 58 50.0
Lalb_Chr04g0263671 Lupinus albus HOM05D004948 ORTHO05D005824 1.8e-06 56.2 72 41.7
RcHm_v2.0_Chr1g0379991 Rosa chinensis HOM05D004948 ORTHO05D005824 1.8e-06 56.2 47 63.8
A02p11140 Brassica napus HOM05D004948 ORTHO05D005824 4.0e-06 55.1 37 62.2
BraA02t06177Z Brassica rapa HOM05D004948 ORTHO05D005824 4.0e-06 55.1 37 62.2
Pp3c8_900 Physcomitrium patens HOM05D004948 ORTHO05D005824 4.0e-06 55.1 41 53.7
CARHR266350 Cardamine hirsuta HOM05D004948 ORTHO05D005824 6.9e-06 54.3 47 53.2
Aa31LG3G9220 Aethionema arabicum HOM05D004948 ORTHO05D005824 9.0e-06 53.9 91 36.3
AL8G28010 Arabidopsis lyrata HOM05D004948 ORTHO05D005824 9.0e-06 53.9 91 39.6

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (3 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (1 genes)
Brassica napus (1 genes)
Brassica oleracea (0 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (3 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (0 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (3 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (6 genes)
Glycine max (1 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (1 genes)
Pisum sativum (0 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (2 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (2 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (2 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (1 genes)
Zea mays (0 genes)

Program Settings