Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014634 Camellia sinensis var. sinensis HOM05D004297 ORTHO05D005213 4.1e-111 404.8 216 100.0
CSS0030491 Camellia sinensis var. sinensis HOM05D004297 ORTHO05D005213 1.0e-29 134.4 138 56.5
Thecc.01G355600 Theobroma cacao HOM05D004297 ORTHO05D005213 1.3e-29 134.0 138 56.5
Gohir.D07G146700 Gossypium hirsutum HOM05D004297 ORTHO05D005213 3.0e-29 132.9 138 55.1
Rhsim07G0012700 Rhododendron simsii HOM05D004297 ORTHO05D005213 5.1e-29 132.1 138 55.1
MSTRG.17286 Avicennia marina HOM05D004297 ORTHO05D005213 8.7e-29 131.3 164 50.6
CANSAT56G3337 Cannabis sativa HOM05D004297 ORTHO05D005213 1.9e-28 130.2 164 49.4
Gorai.001G159200 Gossypium raimondii HOM05D004297 ORTHO05D005213 1.9e-28 130.2 138 54.3
Cfa003893 Carpinus fangiana HOM05D004297 ORTHO05D005213 2.5e-28 129.8 164 50.0
Dinv43843 Davidia involucrata HOM05D004297 ORTHO05D005213 3.3e-28 129.4 164 50.0
Hma1.2p1_0071F.1_g037770 Hydrangea macrophylla HOM05D004297 ORTHO05D005213 4.3e-28 129.0 164 50.6
Hma1.2p1_0071F.1_g037780 Hydrangea macrophylla HOM05D004297 ORTHO05D005213 4.3e-28 129.0 164 50.6
Actinidia20884 Actinidia chinensis HOM05D004297 ORTHO05D005213 5.6e-28 128.6 138 55.8
Gohir.A07G141200 Gossypium hirsutum HOM05D004297 ORTHO05D005213 5.6e-28 128.6 138 53.6
Prupe.2G174200 Prunus persica HOM05D004297 ORTHO05D005213 5.6e-28 128.6 138 55.1
Migut.B01779 Erythranthe guttata HOM05D004297 ORTHO05D005213 7.4e-28 128.3 164 49.4
Manes.01G254400 Manihot esculenta HOM05D004297 ORTHO05D005213 7.4e-28 128.3 164 48.8
SGA_v2.0_scaffold78G25411 Striga asiatica HOM05D004297 ORTHO05D005213 7.4e-28 128.3 164 48.8
Potri.014G087900 Populus trichocarpa HOM05D004297 ORTHO05D005213 9.6e-28 127.9 138 55.8
Lj1g0026001 Lotus japonicus HOM05D004297 ORTHO05D005213 1.3e-27 127.5 138 53.6
Actinidia10047 Actinidia chinensis HOM05D004297 ORTHO05D005213 1.6e-27 127.1 138 55.1
GSVIVG01026995001 Vitis vinifera HOM05D004297 ORTHO05D005213 1.6e-27 127.1 164 48.8
Eucgr.E00109 Eucalyptus grandis HOM05D004297 ORTHO05D005213 2.1e-27 126.7 138 55.1
Atru.chr5.535 Acer truncatum HOM05D004297 ORTHO05D005213 2.8e-27 126.3 138 52.9
Ciclev10018597m.g Citrus clementina HOM05D004297 ORTHO05D005213 2.8e-27 126.3 138 54.3
MD11G1239500 Malus domestica HOM05D004297 ORTHO05D005213 2.8e-27 126.3 138 53.6
Potri.002G162000 Populus trichocarpa HOM05D004297 ORTHO05D005213 2.8e-27 126.3 138 55.8
QL04p054287 Quercus lobata HOM05D004297 ORTHO05D005213 3.6e-27 125.9 138 53.6
vmacro13256 Vaccinium macrocarpon HOM05D004297 ORTHO05D005213 4.8e-27 125.6 127 56.7
CiPaw.01G064500 Carya illinoinensis HOM05D004297 ORTHO05D005213 6.2e-27 125.2 138 53.6
PGR042G3632 Punica granatum HOM05D004297 ORTHO05D005213 6.2e-27 125.2 138 53.6
Duzib133G0964 Durio zibethinus HOM05D004297 ORTHO05D005213 8.1e-27 124.8 138 52.9
Oeu036598.1 Olea europaea HOM05D004297 ORTHO05D005213 8.1e-27 124.8 164 49.4
Sabra14G0063700 Salix brachista HOM05D004297 ORTHO05D005213 8.1e-27 124.8 138 55.1
Duzib138G1153 Durio zibethinus HOM05D004297 ORTHO05D005213 1.1e-26 124.4 138 53.6
Phvul.008G060200 Phaseolus vulgaris HOM05D004297 ORTHO05D005213 3.1e-26 122.9 138 52.9
TWI59G0377 Tripterygium wilfordii HOM05D004297 ORTHO05D005213 4.0e-26 122.5 138 52.9
Ca_00827_v3 Cicer arietinum L. HOM05D000005 ORTHO05D005213 5.3e-26 122.1 138 53.6
TPR.G37786 Trifolium pratense HOM05D004297 ORTHO05D005213 5.3e-26 122.1 138 52.2
Haze_15540 Corylus avellana HOM05D004297 ORTHO05D005213 6.9e-26 121.7 130 56.2
Sabra02G0129100 Salix brachista HOM05D004297 ORTHO05D005213 9.0e-26 121.3 138 54.3
VMungo1383G1290 Vigna mungo HOM05D004297 ORTHO05D005213 1.2e-25 120.9 138 52.2
Cpa.g.sc11.37 Carica papaya HOM05D004297 ORTHO05D005213 1.5e-25 120.6 138 53.6
CiPaw.02G033500 Carya illinoinensis HOM05D004297 ORTHO05D005213 2.0e-25 120.2 138 53.6
FvH4_5g28900 Fragaria vesca HOM05D004297 ORTHO05D005213 2.0e-25 120.2 138 52.9
FAN13G2415 Fragaria x ananassa HOM05D004297 ORTHO05D005213 2.0e-25 120.2 138 52.9
FAN18G0188 Fragaria x ananassa HOM05D004297 ORTHO05D005213 2.0e-25 120.2 138 52.9
Lalb_Chr03g0038271 Lupinus albus HOM05D004297 ORTHO05D005213 2.0e-25 120.2 138 50.7
Cc02_g38370 Coffea canephora HOM05D004297 ORTHO05D005213 2.6e-25 119.8 164 48.8
Psat3g107280 Pisum sativum HOM05D004297 ORTHO05D005213 3.4e-25 119.4 138 50.7
FAN08G3284 Fragaria x ananassa HOM05D004297 ORTHO05D005213 5.8e-25 118.6 138 52.2
Medtr7g078170 Medicago truncatula HOM05D004297 ORTHO05D005213 5.8e-25 118.6 138 51.4
Glyma.18G235800 Glycine max HOM05D004297 ORTHO05D005213 7.6e-25 118.2 138 53.6
Nn6g33322 Nelumbo nucifera HOM05D004297 ORTHO05D005213 7.6e-25 118.2 164 46.3
arahy.Tifrunner.gnm1.ann1.0F1BT2 Arachis hypogaea HOM05D004297 ORTHO05D005213 1.3e-24 117.5 156 46.2
arahy.Tifrunner.gnm1.ann1.553FBT Arachis hypogaea HOM05D004297 ORTHO05D005213 1.3e-24 117.5 156 46.2
TAR629G2795 Trochodendron aralioides HOM05D004297 ORTHO05D005213 1.7e-24 117.1 138 50.7
Glyma.09G256700 Glycine max HOM05D004297 ORTHO05D005213 2.2e-24 116.7 138 52.2
Peaxi162Scf00020g01027 Petunia axillaris HOM05D004297 ORTHO05D005213 2.9e-24 116.3 139 51.1
RcHm_v2.0_Chr7g0221211 Rosa chinensis HOM05D004297 ORTHO05D005213 2.9e-24 116.3 138 51.4
Sopen01g038660 Solanum pennellii HOM05D004297 ORTHO05D005213 2.9e-24 116.3 139 51.1
SalBow3G3037 Salvia bowleyana HOM05D004297 ORTHO05D005213 3.8e-24 115.9 164 45.7
Sed0013986 Sechium edule HOM05D004297 ORTHO05D005213 3.8e-24 115.9 138 50.0
CAN.G78.102 Capsicum annuum HOM05D004297 ORTHO05D005213 8.4e-24 114.8 139 50.4
Nitab4.5_0000583g0330 Nicotiana tabacum HOM05D004297 ORTHO05D005213 8.4e-24 114.8 138 50.7
Nitab4.5_0006942g0020 Nicotiana tabacum HOM05D004297 ORTHO05D005213 8.4e-24 114.8 139 50.4
ECA236G0245 Erigeron canadensis HOM05D004297 ORTHO05D005213 1.1e-23 114.4 138 50.0
Solyc01g094880.3 Solanum lycopersicum HOM05D004297 ORTHO05D005213 1.1e-23 114.4 139 50.4
TAR636G0349 Trochodendron aralioides HOM05D004297 ORTHO05D005213 1.4e-23 114.0 138 51.4
Aqoxy5G04078 Aquilegia oxysepala HOM05D004297 ORTHO05D005213 3.5e-22 109.4 138 48.6
Thhalv10005756m.g Eutrema salsugineum HOM05D004297 ORTHO05D005213 7.9e-22 108.2 139 49.6
MELO3C021189.2 Cucumis melo HOM05D004297 ORTHO05D005213 1.0e-21 107.8 138 47.8
CsaV3_6G000810 Cucumis sativus L. HOM05D004297 ORTHO05D005213 1.0e-21 107.8 138 48.6
PSO063G5582 Papaver somniferum HOM05D004297 ORTHO05D005213 1.0e-21 107.8 138 48.6
ATR0661G292 Amborella trichopoda HOM05D004297 ORTHO05D005213 1.3e-21 107.5 126 49.2
HanXRQChr04g0121341 Helianthus annuus HOM05D004297 ORTHO05D005213 1.3e-21 107.5 138 47.8
DCAR_006941 Daucus carota HOM05D004297 ORTHO05D005213 1.8e-21 107.1 164 43.3
AL5G43840 Arabidopsis lyrata HOM05D004297 ORTHO05D005213 3.9e-21 105.9 138 50.0
A09p53530 Brassica napus HOM05D004297 ORTHO05D005213 3.9e-21 105.9 139 50.4
BraA09t40777Z Brassica rapa HOM05D004297 ORTHO05D005213 3.9e-21 105.9 139 50.4
Sp5g01920 Schrenkiella parvula HOM05D004297 ORTHO05D005213 3.9e-21 105.9 139 49.6
Sed0025112 Sechium edule HOM05D004297 ORTHO05D005213 5.1e-21 105.5 124 50.0
AT3G61480 Arabidopsis thaliana HOM05D004297 ORTHO05D005213 8.7e-21 104.8 139 48.9
unitig_749.g14347 Utricularia gibba HOM05D004297 ORTHO05D005213 8.7e-21 104.8 138 47.1
AT5G28350 Arabidopsis thaliana HOM05D004297 ORTHO05D005213 1.5e-20 104.0 138 50.0
Carub.0005s2817 Capsella rubella HOM05D004297 ORTHO05D005213 1.9e-20 103.6 138 49.3
CARHR171820 Cardamine hirsuta HOM05D004297 ORTHO05D005213 3.3e-20 102.8 138 48.6
ClCG06G003500 Citrullus lanatus HOM05D004297 ORTHO05D005213 4.3e-20 102.4 138 47.8
Aa31LG1G27480 Aethionema arabicum HOM05D004297 ORTHO05D005213 5.6e-20 102.1 138 47.8
C08p36360 Brassica napus HOM05D004297 ORTHO05D005213 5.6e-20 102.1 139 48.9
BolC8t51219H Brassica oleracea HOM05D004297 ORTHO05D005213 5.6e-20 102.1 139 48.9
Lj9C586G6 Lonicera japonica HOM05D004297 ORTHO05D005213 2.1e-19 100.1 117 54.7
THA.LOC104817308 Tarenaya hassleriana HOM05D004297 ORTHO05D005213 2.8e-19 99.8 138 47.8
CDE04G2307 Ceratophyllum demersum HOM05D004297 ORTHO05D005213 2.4e-18 96.7 125 44.0
SHI13402 Sapria himalayana HOM05D004297 ORTHO05D005213 5.3e-18 95.5 138 43.5
EL10Ac1g00379 Beta vulgaris HOM05D004297 ORTHO05D005213 6.9e-18 95.1 138 44.9
SEGI_29424 Sequoiadendron giganteum HOM05D004297 ORTHO05D000001 6.9e-18 95.1 147 41.5
Sc23g0002720 Simmondsia chinensis HOM05D004297 ORTHO05D005213 9.0e-18 94.7 150 42.7
Hund27256 Selenicereus undatus HOM05D004297 ORTHO05D005213 2.0e-17 93.6 145 45.5
Psat7g148560 Pisum sativum HOM05D004297 ORTHO05D005213 2.6e-17 93.2 107 53.3
AUR62022597 Chenopodium quinoa HOM05D004297 ORTHO05D005213 4.5e-17 92.4 138 42.8
BcaC07g40648 Brassica carinata HOM05D004297 ORTHO05D005213 5.8e-17 92.0 107 54.2
Dinv32504 Davidia involucrata HOM05D004297 ORTHO05D005213 1.0e-16 91.3 118 50.0
Lsat_1_v5_gn_7_3220 Lactuca sativa HOM05D004297 ORTHO05D005213 1.7e-16 90.5 127 48.8
CSS0008006 Camellia sinensis var. sinensis HOM05D004297 ORTHO05D005213 2.9e-16 89.7 88 55.7
Zm00001eb257250 Zea mays HOM05D004297 ORTHO05D005213 2.7e-14 83.2 150 37.3
Zm00001eb192800 Zea mays HOM05D004297 ORTHO05D005213 1.8e-13 80.5 150 38.0
Os02g0786000 Oryza sativa ssp. japonica HOM05D004297 ORTHO05D005213 6.7e-13 78.6 150 36.7
Pp3c14_21590 Physcomitrium patens HOM05D004297 ORTHO05D005213 3.1e-10 69.7 137 35.0
MD01G1067900 Malus domestica HOM05D004297 ORTHO05D005213 7.6e-09 65.1 63 58.7
Oeu039184.1 Olea europaea HOM05D004297 ORTHO05D005213 1.7e-08 63.9 89 46.1
COL.COLO4_12744 Corchorus olitorius HOM05D004297 ORTHO05D005213 5.0e-08 62.4 51 58.8
Pp3c2_4880 Physcomitrium patens HOM05D004297 ORTHO05D005213 5.0e-08 62.4 138 31.9
CSS0029755 Camellia sinensis var. sinensis HOM05D004297 ORTHO05D005213 7.2e-07 58.5 63 52.4
Mapoly0027s0035 Marchantia polymorpha HOM05D004297 ORTHO05D005213 1.2e-06 57.8 158 30.4
CBR_g36279 Chara braunii HOM05D004297 ORTHO05D005213 2.1e-06 57.0 102 32.4
SMO367G0176 Selaginella moellendorffii HOM05D004297 ORTHO05D005213 2.7e-06 56.6 157 28.7
HPP92_012694 Vanilla planifolia HOM05D004297 ORTHO05D005213 3.6e-06 56.2 30 83.3

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (1 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (4 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (1 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (0 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (1 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (2 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (0 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings