Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012815 Camellia sinensis var. sinensis HOM05D001808 ORTHO05D033866 4.3e-22 107.1 53 100.0
CSS0030808 Camellia sinensis var. sinensis HOM05D001808 ORTHO05D033866 1.2e-19 99.0 53 92.5
CSS0027408 Camellia sinensis var. sinensis HOM05D053810 ORTHO05D033866 4.2e-17 90.5 47 91.5
FAN08G3030 Fragaria x ananassa HOM05D001808 ORTHO05D001747 3.4e-11 70.9 50 68.0
Dinv09798 Davidia involucrata HOM05D001808 ORTHO05D001747 4.5e-11 70.5 50 66.0
RcHm_v2.0_Chr7g0185361 Rosa chinensis HOM05D001808 ORTHO05D001747 1.3e-10 68.9 50 68.0
FAN04G0848 Fragaria x ananassa HOM05D001808 ORTHO05D001747 1.7e-10 68.6 50 66.0
FvH4_5g12220 Fragaria vesca HOM05D001808 ORTHO05D001747 3.8e-10 67.4 50 64.0
CiPaw.15G130100 Carya illinoinensis HOM05D001808 ORTHO05D001747 4.9e-10 67.0 50 64.0
Duzib084G0243 Durio zibethinus HOM05D001808 ORTHO05D001747 8.4e-10 66.2 50 62.0
MD06G1215700 Malus domestica HOM05D001808 ORTHO05D001747 1.1e-09 65.9 50 64.0
FAN18G2764 Fragaria x ananassa HOM05D001808 ORTHO05D001747 1.9e-09 65.1 50 62.0
QL10p025230 Quercus lobata HOM05D001808 ORTHO05D001747 3.2e-09 64.3 50 62.0
TAR622G1100 Trochodendron aralioides HOM05D001808 ORTHO05D001747 3.2e-09 64.3 50 58.0
Lj5P148T18 Lonicera japonica HOM05D001808 ORTHO05D001747 5.5e-09 63.5 50 58.0
Prupe.5G220900 Prunus persica HOM05D001808 ORTHO05D001747 5.5e-09 63.5 50 62.0
Atru.chr9.836 Acer truncatum HOM05D001808 ORTHO05D001747 7.1e-09 63.2 50 58.0
Nn3g17827 Nelumbo nucifera HOM05D001808 ORTHO05D001747 1.2e-08 62.4 50 58.0
Manes.05G137700 Manihot esculenta HOM05D001808 ORTHO05D001747 1.6e-08 62.0 50 62.0
Thecc.03G034500 Theobroma cacao HOM05D001808 ORTHO05D001747 1.6e-08 62.0 50 64.0
arahy.Tifrunner.gnm1.ann1.FZ18G1 Arachis hypogaea HOM05D001808 ORTHO05D001747 2.7e-08 61.2 50 60.0
arahy.Tifrunner.gnm1.ann1.ZH37XF Arachis hypogaea HOM05D001808 ORTHO05D001747 2.7e-08 61.2 50 58.0
GSVIVG01008279001 Vitis vinifera HOM05D001808 ORTHO05D001747 3.5e-08 60.8 50 58.0
COL.COLO4_05973 Corchorus olitorius HOM05D001808 ORTHO05D001747 4.6e-08 60.5 46 60.9
Glyma.08G041000 Glycine max HOM05D001808 ORTHO05D001747 4.6e-08 60.5 50 58.0
Lj4g0019706 Lotus japonicus HOM05D001808 ORTHO05D001747 1.3e-07 58.9 50 52.0
Phvul.002G316000 Phaseolus vulgaris HOM05D001808 ORTHO05D001747 1.3e-07 58.9 50 56.0
Lalb_Chr05g0222531 Lupinus albus HOM05D001808 ORTHO05D001747 3.9e-07 57.4 49 55.1
Nitab4.5_0000974g0040 Nicotiana tabacum HOM05D001808 ORTHO05D001747 3.9e-07 57.4 50 52.0
Nitab4.5_0009734g0020 Nicotiana tabacum HOM05D001808 ORTHO05D001747 3.9e-07 57.4 52 48.1
CAN.G438.136 Capsicum annuum HOM05D001808 ORTHO05D001747 1.1e-06 55.8 50 50.0
Solyc03g119550.3 Solanum lycopersicum HOM05D001808 ORTHO05D001747 1.1e-06 55.8 50 48.0
Sopen03g038380 Solanum pennellii HOM05D001808 ORTHO05D001747 1.1e-06 55.8 50 48.0
VMungo0251G3693 Vigna mungo HOM05D001808 ORTHO05D001747 1.5e-06 55.5 50 50.0
Peaxi162Scf00015g00937 Petunia axillaris HOM05D001808 ORTHO05D001747 4.3e-06 53.9 50 48.0
TWI81G1032 Tripterygium wilfordii HOM05D001808 ORTHO05D001747 5.6e-06 53.5 50 48.0
ATR0686G175 Amborella trichopoda HOM05D001808 ORTHO05D001747 9.6e-06 52.8 50 50.0
PGSC0003DMG400005632 Solanum tuberosum HOM05D001808 ORTHO05D001747 9.6e-06 52.8 50 46.0

Acer truncatum (1 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (2 genes)
Avicennia marina (0 genes)
Beta vulgaris (0 genes)
Brassica carinata (0 genes)
Brassica napus (0 genes)
Brassica oleracea (0 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (3 genes)
Cannabis sativa (0 genes)
Capsella rubella (0 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (0 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (0 genes)
Citrus clementina (0 genes)
Coffea canephora (0 genes)
Corchorus olitorius (1 genes)
Corylus avellana (0 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (0 genes)
Daucus carota (0 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (0 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (1 genes)
Gossypium hirsutum (0 genes)
Gossypium raimondii (0 genes)
Helianthus annuus (0 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (0 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (0 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (0 genes)
Populus trichocarpa (0 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (0 genes)
Quercus lobata (1 genes)
Rhododendron simsii (0 genes)
Rosa chinensis (1 genes)
Salix brachista (0 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (0 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (1 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (0 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (0 genes)

Program Settings