Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012386 Camellia sinensis var. sinensis HOM05D004014 ORTHO05D018183 9.7e-49 196.4 95 100.0
CSS0012463 Camellia sinensis var. sinensis HOM05D004014 ORTHO05D018183 1.7e-37 159.1 95 84.2
CSS0035663 Camellia sinensis var. sinensis HOM05D004014 ORTHO05D018183 1.7e-37 159.1 95 84.2
CSS0031364 Camellia sinensis var. sinensis HOM05D004014 ORTHO05D018183 3.7e-16 88.2 95 54.7
BcaB07g33627 Brassica carinata HOM05D004014 ORTHO05D005890 1.5e-12 76.3 76 55.3
BcaC01g01290 Brassica carinata HOM05D004014 ORTHO05D005890 1.5e-12 76.3 76 55.3
BcaC08g43331 Brassica carinata HOM05D004014 ORTHO05D005890 1.5e-12 76.3 76 55.3
A06p02300 Brassica napus HOM05D004014 ORTHO05D005890 1.5e-12 76.3 76 55.3
A08p02550 Brassica napus HOM05D004014 ORTHO05D005890 1.5e-12 76.3 76 55.3
C03p90260 Brassica napus HOM05D004014 ORTHO05D005890 1.5e-12 76.3 76 55.3
C06p06860 Brassica napus HOM05D004014 ORTHO05D005890 1.5e-12 76.3 76 55.3
BolC3t21348H Brassica oleracea HOM05D004014 ORTHO05D005890 1.5e-12 76.3 76 55.3
BolC6t35793H Brassica oleracea HOM05D004014 ORTHO05D005890 1.5e-12 76.3 76 55.3
BraA06t23436Z Brassica rapa HOM05D004014 ORTHO05D005890 1.5e-12 76.3 76 55.3
BraA08t32295Z Brassica rapa HOM05D004014 ORTHO05D005890 1.5e-12 76.3 76 55.3
Carub.0001s4058 Capsella rubella HOM05D004014 ORTHO05D005890 4.2e-12 74.7 76 53.9
AL1G59650 Arabidopsis lyrata HOM05D004014 ORTHO05D005890 7.2e-12 73.9 76 52.6
CSS0031715 Camellia sinensis var. sinensis HOM05D004014 ORTHO05D005890 1.6e-11 72.8 48 72.9
AT1G51710 Arabidopsis thaliana HOM05D004014 ORTHO05D005890 2.1e-11 72.4 76 51.3
CSS0027279 Camellia sinensis var. sinensis HOM05D004014 ORTHO05D005890 2.1e-11 72.4 48 70.8
Rhsim12G0204700 Rhododendron simsii HOM05D004014 ORTHO05D005890 2.1e-11 72.4 48 70.8
CARHR041870 Cardamine hirsuta HOM05D004014 ORTHO05D005890 2.8e-11 72.0 48 68.8
Sabra01G0156400 Salix brachista HOM05D004014 ORTHO05D005890 2.8e-11 72.0 57 61.4
Dinv37931 Davidia involucrata HOM05D004014 ORTHO05D005890 8.0e-11 70.5 48 70.8
Ciclev10025482m.g Citrus clementina HOM05D004014 ORTHO05D005890 1.0e-10 70.1 48 66.7
vmacro16995 Vaccinium macrocarpon HOM05D004014 ORTHO05D005890 1.0e-10 70.1 48 68.8
AL3G35320 Arabidopsis lyrata HOM05D004014 ORTHO05D005890 1.8e-10 69.3 76 48.7
Potri.001G197400 Populus trichocarpa HOM05D004014 ORTHO05D005890 1.8e-10 69.3 67 53.7
CiPaw.02G141900 Carya illinoinensis HOM05D004014 ORTHO05D005890 2.3e-10 68.9 48 66.7
Lj5A49T39 Lonicera japonica HOM05D004014 ORTHO05D005890 2.3e-10 68.9 37 83.8
TWI79G1365 Tripterygium wilfordii HOM05D004014 ORTHO05D005890 2.3e-10 68.9 48 68.8
Dinv30396 Davidia involucrata HOM05D004014 ORTHO05D005890 3.0e-10 68.6 48 66.7
GSVIVG01016888001 Vitis vinifera HOM05D004014 ORTHO05D005890 3.0e-10 68.6 48 68.8
Actinidia09020 Actinidia chinensis HOM05D004014 ORTHO05D005890 4.0e-10 68.2 48 68.8
Duzib160G0604 Durio zibethinus HOM05D004014 ORTHO05D005890 4.0e-10 68.2 48 64.6
PSO832G1047 Papaver somniferum HOM05D004014 ORTHO05D005890 4.0e-10 68.2 56 64.3
Thhalv10020636m.g Eutrema salsugineum HOM05D004014 ORTHO05D005890 5.2e-10 67.8 76 48.7
Lsat_1_v5_gn_5_53240 Lactuca sativa HOM05D004014 ORTHO05D018183 5.2e-10 67.8 79 45.6
PSO063G2767 Papaver somniferum HOM05D004014 ORTHO05D005890 5.2e-10 67.8 48 66.7
Sp3g19320 Schrenkiella parvula HOM05D004014 ORTHO05D005890 5.2e-10 67.8 75 49.3
COL.COLO4_30610 Corchorus olitorius HOM05D004014 ORTHO05D005890 6.8e-10 67.4 48 64.6
Lsat_1_v5_gn_1_36421 Lactuca sativa HOM05D004014 ORTHO05D005890 6.8e-10 67.4 48 66.7
MD09G1195900 Malus domestica HOM05D004014 ORTHO05D005890 6.8e-10 67.4 48 66.7
MD17G1176500 Malus domestica HOM05D004014 ORTHO05D005890 6.8e-10 67.4 48 66.7
Actinidia39122 Actinidia chinensis HOM05D004014 ORTHO05D005890 8.8e-10 67.0 48 66.7
CANSAT56G3696 Cannabis sativa HOM05D004014 ORTHO05D005890 8.8e-10 67.0 48 64.6
ECA232G4630 Erigeron canadensis HOM05D004014 ORTHO05D005890 8.8e-10 67.0 48 64.6
Carub.0003s2128 Capsella rubella HOM05D004014 ORTHO05D018183 1.2e-09 66.6 66 53.0
Lalb_Chr04g0263081 Lupinus albus HOM05D004014 ORTHO05D005890 1.2e-09 66.6 48 64.6
Lalb_Chr25g0280531 Lupinus albus HOM05D004014 ORTHO05D005890 1.2e-09 66.6 48 62.5
AT3G21280 Arabidopsis thaliana HOM05D004014 ORTHO05D005890 1.5e-09 66.2 76 47.4
EL10Ac2g03344 Beta vulgaris HOM05D004014 ORTHO05D005890 1.5e-09 66.2 48 62.5
Duzib192G0196 Durio zibethinus HOM05D004014 ORTHO05D005890 1.5e-09 66.2 67 50.7
Manes.11G028700 Manihot esculenta HOM05D004014 ORTHO05D005890 1.5e-09 66.2 62 56.5
Aqoxy7G01294 Aquilegia oxysepala HOM05D004014 ORTHO05D005890 2.0e-09 65.9 48 66.7
Haze_15924 Corylus avellana HOM05D004014 ORTHO05D005890 2.0e-09 65.9 48 64.6
Oeu039979.1 Olea europaea HOM05D004014 ORTHO05D005890 2.6e-09 65.5 67 53.7
Prupe.3G052400 Prunus persica HOM05D004014 ORTHO05D005890 2.6e-09 65.5 47 68.1
CDE07G0617 Ceratophyllum demersum HOM05D004014 ORTHO05D005890 3.4e-09 65.1 54 57.4
FvH4_6g32980 Fragaria vesca HOM05D004014 ORTHO05D005890 3.4e-09 65.1 48 64.6
FAN02G0480 Fragaria x ananassa HOM05D004014 ORTHO05D005890 3.4e-09 65.1 48 64.6
FAN05G5071 Fragaria x ananassa HOM05D004014 ORTHO05D005890 3.4e-09 65.1 48 64.6
FAN09G0688 Fragaria x ananassa HOM05D004014 ORTHO05D005890 3.4e-09 65.1 48 64.6
FAN14G2620 Fragaria x ananassa HOM05D004014 ORTHO05D005890 3.4e-09 65.1 48 64.6
HanXRQChr05g0140121 Helianthus annuus HOM05D004014 ORTHO05D005890 3.4e-09 65.1 48 62.5
Nn8g38926 Nelumbo nucifera HOM05D004014 ORTHO05D005890 3.4e-09 65.1 48 64.6
Potri.003G033700 Populus trichocarpa HOM05D004014 ORTHO05D005890 3.4e-09 65.1 48 64.6
Hund00756 Selenicereus undatus HOM05D004014 ORTHO05D005890 3.4e-09 65.1 48 58.3
Thecc.06G108100 Theobroma cacao HOM05D004014 ORTHO05D005890 3.4e-09 65.1 48 62.5
unitig_37.g12991 Utricularia gibba HOM05D004014 ORTHO05D005890 3.4e-09 65.1 54 59.3
Atru.chr1.3637 Acer truncatum HOM05D004014 ORTHO05D005890 4.4e-09 64.7 48 62.5
Atru.chr8.1187 Acer truncatum HOM05D004014 ORTHO05D005890 4.4e-09 64.7 48 62.5
DCAR_007611 Daucus carota HOM05D004014 ORTHO05D005890 4.4e-09 64.7 37 78.4
Manes.04G137700 Manihot esculenta HOM05D004014 ORTHO05D005890 4.4e-09 64.7 48 62.5
PGR102G0116 Punica granatum HOM05D004014 ORTHO05D005890 4.4e-09 64.7 48 62.5
Lsat_1_v5_gn_4_95921 Lactuca sativa HOM05D004014 ORTHO05D005890 5.7e-09 64.3 48 62.5
TAR626G0060 Trochodendron aralioides HOM05D004014 ORTHO05D005890 5.7e-09 64.3 48 64.6
VMungo0331G1129 Vigna mungo HOM05D004014 ORTHO05D005890 5.7e-09 64.3 67 49.3
Migut.I01003 Erythranthe guttata HOM05D004014 ORTHO05D005890 7.5e-09 63.9 48 64.6
Os01g0550100 Oryza sativa ssp. japonica HOM05D004014 ORTHO05D005890 7.5e-09 63.9 48 62.5
Sc12g0009850 Simmondsia chinensis HOM05D004014 ORTHO05D005890 7.5e-09 63.9 48 62.5
CiPaw.01G227100 Carya illinoinensis HOM05D004014 ORTHO05D005890 9.8e-09 63.5 47 63.8
QL05p015866 Quercus lobata HOM05D004014 ORTHO05D005890 9.8e-09 63.5 47 63.8
RcHm_v2.0_Chr2g0142531 Rosa chinensis HOM05D004014 ORTHO05D005890 9.8e-09 63.5 48 64.6
Sabra03G0029500 Salix brachista HOM05D004014 ORTHO05D005890 9.8e-09 63.5 48 62.5
SGA_v2.0_scaffold71G23744 Striga asiatica HOM05D004014 ORTHO05D005890 9.8e-09 63.5 48 62.5
arahy.Tifrunner.gnm1.ann1.ZVXK34 Arachis hypogaea HOM05D004014 ORTHO05D005890 1.3e-08 63.2 48 60.4
Glyma.08G195900 Glycine max HOM05D004014 ORTHO05D005890 1.3e-08 63.2 48 60.4
MBI04_g06225_MAGBIO Magnolia biondii HOM05D004014 ORTHO05D005890 1.3e-08 63.2 48 62.5
Psat4g193640 Pisum sativum HOM05D004014 ORTHO05D005890 1.3e-08 63.2 48 60.4
THA.LOC104817933 Tarenaya hassleriana HOM05D004014 ORTHO05D005890 1.3e-08 63.2 48 62.5
AUR62037625 Chenopodium quinoa HOM05D004014 ORTHO05D005890 1.7e-08 62.8 48 58.3
AUR62041068 Chenopodium quinoa HOM05D004014 ORTHO05D005890 1.7e-08 62.8 48 58.3
Eucgr.F03104 Eucalyptus grandis HOM05D004014 ORTHO05D005890 1.7e-08 62.8 48 60.4
ClCG09G000550 Citrullus lanatus HOM05D004014 ORTHO05D005890 2.2e-08 62.4 48 62.5
Glyma.07G012300 Glycine max HOM05D004014 ORTHO05D005890 2.2e-08 62.4 48 60.4
Phvul.010G141700 Phaseolus vulgaris HOM05D004014 ORTHO05D005890 2.2e-08 62.4 67 47.8
ATR0789G134 Amborella trichopoda HOM05D004014 ORTHO05D005890 2.8e-08 62.0 48 62.5
Ca_23300_v3 Cicer arietinum L. HOM05D004014 ORTHO05D005890 2.8e-08 62.0 48 60.4
Gohir.A09G080500 Gossypium hirsutum HOM05D004014 ORTHO05D005890 2.8e-08 62.0 47 59.6
Gorai.006G096100 Gossypium raimondii HOM05D004014 ORTHO05D005890 2.8e-08 62.0 47 59.6
HanXRQChr09g0276341 Helianthus annuus HOM05D004014 ORTHO05D005890 2.8e-08 62.0 48 62.5
Medtr8g015660 Medicago truncatula HOM05D004014 ORTHO05D005890 2.8e-08 62.0 48 58.3
QL05p015273 Quercus lobata HOM05D004014 ORTHO05D005890 2.8e-08 62.0 36 77.8
THA.LOC104805917 Tarenaya hassleriana HOM05D004014 ORTHO05D005890 2.8e-08 62.0 48 62.5
CsaV3_7G034900 Cucumis sativus L. HOM05D004014 ORTHO05D005890 3.7e-08 61.6 48 60.4
Sed0015232 Sechium edule HOM05D004014 ORTHO05D005890 3.7e-08 61.6 48 62.5
SGA_v2.0_scaffold45G16993 Striga asiatica HOM05D004014 ORTHO05D005890 3.7e-08 61.6 48 60.4
Zm00001eb162410 Zea mays HOM05D004014 ORTHO05D005890 3.7e-08 61.6 48 60.4
arahy.Tifrunner.gnm1.ann1.SBEJ10 Arachis hypogaea HOM05D004014 ORTHO05D005890 4.9e-08 61.2 67 47.8
Cc04_g02170 Coffea canephora HOM05D004014 ORTHO05D005890 6.3e-08 60.8 48 60.4
Nitab4.5_0006642g0010 Nicotiana tabacum HOM05D004014 ORTHO05D005890 6.3e-08 60.8 56 51.8
Peaxi162Scf00177g00215 Petunia axillaris HOM05D004014 ORTHO05D005890 6.3e-08 60.8 48 58.3
SalBow6G0444 Salvia bowleyana HOM05D004014 ORTHO05D005890 6.3e-08 60.8 46 63.0
TPR.G24219 Trifolium pratense HOM05D004014 ORTHO05D005890 6.3e-08 60.8 48 58.3
Solyc12g044740.2 Solanum lycopersicum HOM05D004014 ORTHO05D005890 8.3e-08 60.5 48 56.2
Sopen12g022890 Solanum pennellii HOM05D004014 ORTHO05D005890 8.3e-08 60.5 48 56.2
HPP92_005519 Vanilla planifolia HOM05D004014 ORTHO05D005890 8.3e-08 60.5 48 60.4
CAN.G12.3 Capsicum annuum HOM05D004014 ORTHO05D005890 1.1e-07 60.1 48 56.2
Lj3g0023335 Lotus japonicus HOM05D004014 ORTHO05D005890 1.1e-07 60.1 48 58.3
Nitab4.5_0003218g0070 Nicotiana tabacum HOM05D004014 ORTHO05D005890 1.1e-07 60.1 48 56.2
DCAR_007610 Daucus carota HOM05D004014 ORTHO05D005890 1.4e-07 59.7 37 75.7
MSTRG.22603 Avicennia marina HOM05D004014 ORTHO05D005890 1.8e-07 59.3 48 58.3
Zm00001eb356540 Zea mays HOM05D004014 ORTHO05D005890 1.8e-07 59.3 48 58.3
MELO3C024402.2 Cucumis melo HOM05D004014 ORTHO05D005890 2.4e-07 58.9 48 58.3
Gohir.D09G080501 Gossypium hirsutum HOM05D004014 ORTHO05D005890 2.4e-07 58.9 47 57.4
Sed0015765 Sechium edule HOM05D004014 ORTHO05D005890 4.1e-07 58.2 48 60.4
Gohir.A10G062050 Gossypium hirsutum HOM05D004014 ORTHO05D005890 7.0e-07 57.4 37 67.6
Thhalv10011383m.g Eutrema salsugineum HOM05D004014 ORTHO05D005890 2.0e-06 55.8 37 67.6

Acer truncatum (2 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (3 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (6 genes)
Cannabis sativa (1 genes)
Capsella rubella (2 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (2 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (3 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (3 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (0 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings