Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Gene Selection
Species Selection

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
CSS0011674	Camellia sinensis var. sinensis	HOM05D000003	ORTHO05D000006	5.7e-45	183.7	84	100.0
CSS0002781	Camellia sinensis var. sinensis	HOM05D000003	ORTHO05D000006	9.2e-27	123.2	83	69.9
CSS0017812	Camellia sinensis var. sinensis	HOM05D000003	ORTHO05D000006	9.2e-27	123.2	83	68.7
Rhsim11G0149500	Rhododendron simsii	HOM05D000003	ORTHO05D000006	3.6e-23	111.3	84	58.3
CSS0034647	Camellia sinensis var. sinensis	HOM05D000003	ORTHO05D000006	2.0e-21	105.5	85	61.2
CSS0025077	Camellia sinensis var. sinensis	HOM05D000003	ORTHO05D000006	5.8e-21	104.0	85	61.2
Rhsim01G0139300	Rhododendron simsii	HOM05D000003	ORTHO05D000006	2.2e-20	102.1	84	56.0
RhsimUnG0236900	Rhododendron simsii	HOM05D000003	ORTHO05D000004	2.9e-20	101.7	84	56.0
Rhsim07G0162700	Rhododendron simsii	HOM05D000003	ORTHO05D000004	3.7e-20	101.3	84	56.0
Rhsim08G0178900	Rhododendron simsii	HOM05D000003	ORTHO05D000006	4.9e-20	100.9	76	61.8
Rhsim04G0047200	Rhododendron simsii	HOM05D000003	ORTHO05D000004	6.4e-20	100.5	84	57.1
Rhsim08G0082000	Rhododendron simsii	HOM05D000003	ORTHO05D000006	1.1e-19	99.8	84	50.0
RhsimUnG0247100	Rhododendron simsii	HOM05D000003	ORTHO05D000004	4.1e-19	97.8	84	58.3
Rhsim12G0079800	Rhododendron simsii	HOM05D000003	ORTHO05D000006	5.4e-19	97.4	84	52.4
Rhsim06G0045000	Rhododendron simsii	HOM05D006182	ORTHO05D007236	1.5e-16	89.4	81	51.9
Rhsim03G0083500	Rhododendron simsii	HOM05D000003	ORTHO05D000006	2.8e-15	85.1	82	45.1
Rhsim01G0274800	Rhododendron simsii	HOM05D000003	ORTHO05D000006	1.4e-14	82.8	81	48.1
Rhsim01G0092300	Rhododendron simsii	HOM05D000003	ORTHO05D000006	2.4e-14	82.0	81	48.1
Rhsim11G0021500	Rhododendron simsii	HOM05D002187	ORTHO05D002243	2.4e-14	82.0	78	50.0
RhsimUnG0224600	Rhododendron simsii	HOM05D000003	ORTHO05D000006	3.1e-14	81.6	81	50.6
Rhsim04G0242400	Rhododendron simsii	HOM05D000003	ORTHO05D000004	5.2e-14	80.9	82	42.7
Rhsim01G0048000	Rhododendron simsii	HOM05D000003	ORTHO05D000006	8.9e-14	80.1	81	48.1
Rhsim01G0140300	Rhododendron simsii	HOM05D000003	ORTHO05D000004	8.9e-14	80.1	81	49.4
Rhsim09G0070000	Rhododendron simsii	HOM05D000003	ORTHO05D000006	1.2e-13	79.7	83	43.4
Rhsim03G0080700	Rhododendron simsii	HOM05D000003	ORTHO05D000006	2.0e-13	79.0	82	42.7
Rhsim08G0169600	Rhododendron simsii	HOM05D000003	ORTHO05D000004	2.6e-13	78.6	82	45.1
Rhsim07G0213000	Rhododendron simsii	HOM05D000003	ORTHO05D008945	4.4e-13	77.8	78	43.6
Rhsim09G0068100	Rhododendron simsii	HOM05D000003	ORTHO05D000006	4.4e-13	77.8	81	45.7
Rhsim02G0152800	Rhododendron simsii	HOM05D000003	ORTHO05D000006	5.8e-13	77.4	82	42.7
Rhsim02G0217100	Rhododendron simsii	HOM05D000003	ORTHO05D000006	5.8e-13	77.4	76	46.1
Rhsim02G0177800	Rhododendron simsii	HOM05D000003	ORTHO05D000006	1.3e-12	76.3	81	45.7
Rhsim02G0238600	Rhododendron simsii	HOM05D000003	ORTHO05D000006	1.3e-12	76.3	76	46.1
Rhsim02G0107700	Rhododendron simsii	HOM05D000048	ORTHO05D000006	1.7e-12	75.9	76	44.7
Rhsim05G0162800	Rhododendron simsii	HOM05D001637	ORTHO05D000006	1.7e-12	75.9	81	45.7
Rhsim10G0112100	Rhododendron simsii	HOM05D000003	ORTHO05D000006	1.7e-12	75.9	81	46.9
Rhsim03G0167500	Rhododendron simsii	HOM05D000003	ORTHO05D000004	2.2e-12	75.5	81	46.9
Rhsim03G0108700	Rhododendron simsii	HOM05D000003	ORTHO05D000006	4.9e-12	74.3	81	48.1
Rhsim09G0064700	Rhododendron simsii	HOM05D000003	ORTHO05D000004	4.9e-12	74.3	85	40.0
Rhsim09G0065000	Rhododendron simsii	HOM05D000003	ORTHO05D000006	4.9e-12	74.3	85	40.0
Rhsim08G0131400	Rhododendron simsii	HOM05D000003	ORTHO05D000004	6.4e-12	73.9	58	55.2
Rhsim03G0009500	Rhododendron simsii	HOM05D000003	ORTHO05D000006	1.4e-11	72.8	81	45.7
Rhsim07G0114000	Rhododendron simsii	HOM05D000003	ORTHO05D000006	1.9e-11	72.4	76	40.8
RhsimUnG0155100	Rhododendron simsii	HOM05D000003	ORTHO05D000004	1.9e-11	72.4	74	39.2
Rhsim01G0175200	Rhododendron simsii	HOM05D000003	ORTHO05D000006	7.1e-11	70.5	76	43.4
TAR536G0010	Trochodendron aralioides	HOM05D000003	ORTHO05D000006	1.2e-10	69.7	84	41.7
Rhsim02G0229500	Rhododendron simsii	HOM05D000003	ORTHO05D000006	2.1e-10	68.9	76	39.5
Rhsim06G0096800	Rhododendron simsii	HOM05D000003	ORTHO05D000006	2.1e-10	68.9	76	43.4
vmacro07385	Vaccinium macrocarpon	HOM05D000103	ORTHO05D000049	2.1e-10	68.9	74	39.2
Rhsim01G0110800	Rhododendron simsii	HOM05D000003	ORTHO05D000006	4.6e-10	67.8	76	39.5
Rhsim12G0088700	Rhododendron simsii	HOM05D000003	ORTHO05D000006	6.0e-10	67.4	78	43.6
Rhsim05G0135000	Rhododendron simsii	HOM05D000003	ORTHO05D000006	1.7e-09	65.9	78	38.5
Rhsim02G0134700	Rhododendron simsii	HOM05D000003	ORTHO05D000006	2.3e-09	65.5	67	49.3
PSO040G0023	Papaver somniferum	HOM05D000003	ORTHO05D000006	3.0e-09	65.1	82	35.4
Rhsim02G0151600	Rhododendron simsii	HOM05D000003	ORTHO05D000006	3.9e-09	64.7	76	43.4
Actinidia31222	Actinidia chinensis	HOM05D000003	ORTHO05D000006	6.6e-09	63.9	49	59.2
Rhsim09G0083100	Rhododendron simsii	HOM05D000003	ORTHO05D000006	1.5e-08	62.8	76	42.1
vmacro05354	Vaccinium macrocarpon	HOM05D002580	ORTHO05D002811	1.5e-08	62.8	70	37.1
RhsimUnG0081000	Rhododendron simsii	HOM05D000003	ORTHO05D000006	3.3e-08	61.6	75	40.0
Rhsim08G0187900	Rhododendron simsii	HOM05D000003	ORTHO05D000006	7.3e-08	60.5	76	42.1
FvH4_6g23032	Fragaria vesca	HOM05D000003	ORTHO05D017879	1.2e-07	59.7	83	37.3
PSO675G0655	Papaver somniferum	HOM05D000003	ORTHO05D000006	1.2e-07	59.7	81	35.8
Rhsim11G0048600	Rhododendron simsii	HOM05D000003	ORTHO05D000126	1.6e-07	59.3	58	48.3
Rhsim05G0112800	Rhododendron simsii	HOM05D000003	ORTHO05D000004	2.8e-07	58.5	53	45.3
Rhsim05G0192100	Rhododendron simsii	HOM05D000003	ORTHO05D000006	3.6e-07	58.2	56	46.4
Rhsim11G0006400	Rhododendron simsii	HOM05D000003	ORTHO05D000006	3.6e-07	58.2	81	38.3
Ah.10g031070	Amaranthus hybridus	HOM05D000003	ORTHO05D000006	4.7e-07	57.8	81	35.8
PSO782G0225	Papaver somniferum	HOM05D000003	ORTHO05D000004	1.1e-06	56.6	81	34.6
Rhsim08G0119400	Rhododendron simsii	HOM05D000003	ORTHO05D000006	1.1e-06	56.6	53	41.5
Aa31LG1G5100	Aethionema arabicum	HOM05D000003	ORTHO05D000004	1.4e-06	56.2	64	43.8
FvH4_1g17821	Fragaria vesca	HOM05D000003	ORTHO05D046457	1.4e-06	56.2	70	38.6
BcaC08g46847	Brassica carinata	HOM05D000496	ORTHO05D000411	1.8e-06	55.8	83	37.3
BcaB08g34848	Brassica carinata	HOM05D000496	ORTHO05D000411	3.1e-06	55.1	83	34.9
Rhsim09G0090900	Rhododendron simsii	HOM05D000003	ORTHO05D000126	3.1e-06	55.1	46	52.2
BcaB02g09878	Brassica carinata	HOM05D000496	ORTHO05D000411	4.0e-06	54.7	83	37.3
COL.COLO4_08414	Corchorus olitorius	HOM05D000003	ORTHO05D000126	4.0e-06	54.7	51	43.1
PSO447G0142	Papaver somniferum	HOM05D000003	ORTHO05D000004	4.0e-06	54.7	55	43.6
CANSAT11G0839	Cannabis sativa	HOM05D000003	ORTHO05D000006	5.2e-06	54.3	68	35.3
FvH4_6g23371	Fragaria vesca	HOM05D000003	ORTHO05D000006	5.2e-06	54.3	75	36.0
PSO455G0056	Papaver somniferum	HOM05D000003	ORTHO05D000006	5.2e-06	54.3	72	36.1
BcaB08g34387	Brassica carinata	HOM05D000003	ORTHO05D000006	6.9e-06	53.9	83	37.3
PSO210G0481	Papaver somniferum	HOM05D000003	ORTHO05D000006	6.9e-06	53.9	72	34.7
Aa31sc92G10	Aethionema arabicum	HOM05D000003	ORTHO05D000004	9.0e-06	53.5	79	34.2
BolC6t38788H	Brassica oleracea	HOM05D000385	ORTHO05D027499	9.0e-06	53.5	68	36.8
Carub.0002s0960	Capsella rubella	HOM05D000003	ORTHO05D000006	9.0e-06	53.5	83	36.1

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm

Tree construction algorithm

Edit MSA alignment

Interactive Phylogenetics Module

Contact Settings

Data Settings

Program Settings

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