Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010539 Camellia sinensis var. sinensis HOM05D001809 ORTHO05D001802 0.0e+00 1501.1 767 100.0
Actinidia23269 Actinidia chinensis HOM05D001809 ORTHO05D001802 3.0e-172 609.8 751 51.4
Dinv39323 Davidia involucrata HOM05D001809 ORTHO05D001802 3.3e-163 579.7 754 49.1
CSS0013749 Camellia sinensis var. sinensis HOM05D001809 ORTHO05D001802 9.9e-144 515.0 765 46.9
Rhsim06G0048700 Rhododendron simsii HOM05D001809 ORTHO05D001802 7.9e-133 478.8 728 46.2
vmacro21530 Vaccinium macrocarpon HOM05D001809 ORTHO05D001802 9.0e-129 465.3 743 44.3
Dinv35968 Davidia involucrata HOM05D001809 ORTHO05D001802 5.8e-128 462.6 718 43.0
Hma1.2p1_0982F.1_g243940 Hydrangea macrophylla HOM05D001809 ORTHO05D001802 8.2e-98 362.5 736 39.9
Atru.chr13.657_Atru.chr13.658 Acer truncatum HOM05D001809 ORTHO05D001802 2.7e-88 330.9 735 37.0
TAR381G0046 Trochodendron aralioides HOM05D001809 ORTHO05D001802 6.1e-85 319.7 903 31.2
QL02p005255 Quercus lobata HOM05D001809 ORTHO05D001802 1.4e-84 318.5 760 35.1
Potri.014G031000 Populus trichocarpa HOM05D001809 ORTHO05D001802 1.4e-76 292.0 748 34.0
Manes.18G035700 Manihot esculenta HOM05D001809 ORTHO05D001802 3.0e-76 290.8 749 33.2
Thecc.08G010200 Theobroma cacao HOM05D001809 ORTHO05D001802 1.3e-74 285.4 817 31.5
Sabra14G0022000 Salix brachista HOM05D001809 ORTHO05D001802 3.1e-73 280.8 777 32.7
Haze_17533 Corylus avellana HOM05D001809 ORTHO05D001802 4.1e-73 280.4 829 33.5
RcHm_v2.0_Chr6g0307781 Rosa chinensis HOM05D001809 ORTHO05D001802 4.1e-73 280.4 757 33.0
Haze_17536 Corylus avellana HOM05D001809 ORTHO05D001802 3.5e-72 277.3 829 33.5
Lj4A54T45 Lonicera japonica HOM05D001809 ORTHO05D001802 1.1e-70 272.3 720 33.3
Ciclev10000118m.g Citrus clementina HOM05D001809 ORTHO05D001802 1.9e-70 271.6 752 33.1
Duzib116G0555 Durio zibethinus HOM05D001809 ORTHO05D001802 3.3e-70 270.8 858 31.2
RcHm_v2.0_Chr6g0307611 Rosa chinensis HOM05D001809 ORTHO05D001802 4.3e-70 270.4 757 32.5
COL.COLO4_26484 Corchorus olitorius HOM05D001809 ORTHO05D001802 2.0e-67 261.5 813 31.6
FAN15G0729 Fragaria x ananassa HOM05D001809 ORTHO05D001802 6.4e-66 256.5 762 32.2
Prupe.1G437400 Prunus persica HOM05D001809 ORTHO05D001802 6.4e-66 256.5 748 32.1
FvH4_2g34540 Fragaria vesca HOM05D001809 ORTHO05D001802 1.8e-65 255.0 754 31.7
FAN20G2363 Fragaria x ananassa HOM05D001809 ORTHO05D001802 1.8e-65 255.0 758 32.1
FAN27G2534 Fragaria x ananassa HOM05D001809 ORTHO05D001802 3.0e-63 247.7 757 31.6
TWI36G0281 Tripterygium wilfordii HOM05D001809 ORTHO05D001802 6.6e-63 246.5 748 31.6
CiPaw.15G060900 Carya illinoinensis HOM05D001809 ORTHO05D001802 8.6e-63 246.1 747 32.3
Gohir.D05G205000 Gossypium hirsutum HOM05D001809 ORTHO05D001802 6.2e-61 240.0 754 30.6
Gorai.009G211300 Gossypium raimondii HOM05D001809 ORTHO05D001802 8.0e-61 239.6 754 30.5
MD15G1084000 Malus domestica HOM05D001809 ORTHO05D001802 1.8e-60 238.4 728 32.0
Gohir.D06G015600 Gossypium hirsutum HOM05D001809 ORTHO05D001802 3.4e-59 234.2 834 29.1
Manes.05G172500 Manihot esculenta HOM05D001809 ORTHO05D001802 1.2e-56 225.7 965 27.4
GSVIVG01009515001 Vitis vinifera HOM05D001809 ORTHO05D001802 1.6e-56 225.3 601 32.3
Gorai.010G018400 Gossypium raimondii HOM05D001809 ORTHO05D001802 2.0e-56 224.9 827 29.5
Gohir.A06G017500 Gossypium hirsutum HOM05D001809 ORTHO05D001802 1.1e-54 219.2 836 28.7
MD15G1030100 Malus domestica HOM05D001809 ORTHO05D001802 1.1e-54 219.2 751 31.3
DCAR_008790 Daucus carota HOM05D001809 ORTHO05D001802 2.1e-45 188.3 734 27.5
Lj4C774T6 Lonicera japonica HOM05D001809 ORTHO05D001802 2.1e-45 188.3 748 30.2
Eucgr.F00236 Eucalyptus grandis HOM05D001809 ORTHO05D001802 6.2e-45 186.8 821 26.7
CAN.G371.29 Capsicum annuum HOM05D001809 ORTHO05D001802 5.8e-43 180.3 727 27.6
MELO3C010877.2 Cucumis melo HOM05D001809 ORTHO05D001802 1.1e-41 176.0 740 28.5
CsaV3_2G027980 Cucumis sativus L. HOM05D001809 ORTHO05D001802 5.4e-41 173.7 740 27.4
Manes.05G172400 Manihot esculenta HOM05D001809 ORTHO05D001802 7.1e-41 173.3 584 30.1
Peaxi162Scf00252g01217 Petunia axillaris HOM05D001809 ORTHO05D001802 4.6e-40 170.6 756 29.2
Sopen04g032710 Solanum pennellii HOM05D001809 ORTHO05D001802 4.3e-38 164.1 732 27.6
Solyc04g079100.3 Solanum lycopersicum HOM05D001809 ORTHO05D001802 9.6e-38 162.9 722 27.6
ClCG08G015780 Citrullus lanatus HOM05D001809 ORTHO05D001802 1.2e-37 162.5 763 27.1
PGSC0003DMG401008019 Solanum tuberosum HOM05D001809 ORTHO05D001802 2.1e-37 161.8 731 26.7
Nitab4.5_0000686g0080 Nicotiana tabacum HOM05D001809 ORTHO05D001802 3.8e-34 151.0 718 26.7
Nn5g30247 Nelumbo nucifera HOM05D001809 ORTHO05D001802 6.4e-34 150.2 798 25.4
Gohir.A05G201900 Gossypium hirsutum HOM05D001809 ORTHO05D001802 1.9e-33 148.7 525 30.3
Nitab4.5_0001101g0060 Nicotiana tabacum HOM05D001809 ORTHO05D001802 4.2e-33 147.5 715 26.7
Aqoxy6G01351 Aquilegia oxysepala HOM05D001809 ORTHO05D001802 3.5e-32 144.4 826 25.8
DCAR_012770 Daucus carota HOM05D001809 ORTHO05D001802 1.9e-30 138.7 773 24.3
Sc02g0007070 Simmondsia chinensis HOM05D001809 ORTHO05D001802 1.9e-30 138.7 824 26.2
MSTRG.25097 Avicennia marina HOM05D001809 ORTHO05D001802 1.6e-29 135.6 777 25.1
Gohir.D02G091800 Gossypium hirsutum HOM05D001809 ORTHO05D001802 1.1e-28 132.9 809 24.6
Gorai.005G103000 Gossypium raimondii HOM05D001809 ORTHO05D001802 5.3e-28 130.6 812 24.6
Sed0004513 Sechium edule HOM05D001809 ORTHO05D001802 5.3e-28 130.6 797 24.5
Gohir.A03G077200 Gossypium hirsutum HOM05D001809 ORTHO05D001802 9.3e-25 119.8 814 24.9
CANSAT11G1610 Cannabis sativa HOM05D001809 ORTHO05D001802 1.0e-23 116.3 760 25.4
MSTRG.1341 Avicennia marina HOM05D001809 ORTHO05D001802 2.3e-23 115.2 731 25.6
Cpa.g.sc49.6 Carica papaya HOM05D001809 ORTHO05D001802 6.7e-23 113.6 236 33.1
Glyma.04G038200 Glycine max HOM05D001809 ORTHO05D001802 1.1e-20 106.3 747 27.3
PSO541G5455 Papaver somniferum HOM05D001809 ORTHO05D001802 5.3e-20 104.0 722 24.0
PGR083G0900 Punica granatum HOM05D001809 ORTHO05D001802 1.3e-18 99.4 784 25.0
Gohir.A05G201850 Gossypium hirsutum HOM05D001809 ORTHO05D001802 2.4e-17 95.1 110 48.2
SalBow7G1470 Salvia bowleyana HOM05D001809 ORTHO05D001802 3.2e-17 94.7 570 26.8
Lalb_Chr23g0267151 Lupinus albus HOM05D001809 ORTHO05D001802 1.0e-15 89.7 326 33.4
Lj1g0025902 Lotus japonicus HOM05D001809 ORTHO05D001802 5.1e-15 87.4 697 26.8
Phvul.009G064400 Phaseolus vulgaris HOM05D001809 ORTHO05D001802 6.7e-15 87.0 724 26.4
EL10Ac1g01728 Beta vulgaris HOM05D001809 ORTHO05D001802 8.7e-15 86.7 293 28.3
Actinidia22621 Actinidia chinensis HOM05D001809 ORTHO05D001802 1.1e-14 86.3 102 54.9
Ah.11g043300 Amaranthus hybridus HOM05D001809 ORTHO05D001802 9.6e-14 83.2 193 30.6
QL09p045403 Quercus lobata HOM05D000125 ORTHO05D010101 9.6e-14 83.2 102 49.0
MBI02_g02962_MAGBIO Magnolia biondii HOM05D001809 ORTHO05D001802 1.6e-13 82.4 526 23.8
Oeu044837.2 Olea europaea HOM05D001809 ORTHO05D001802 2.8e-13 81.6 696 24.0
ECA232G3129 Erigeron canadensis HOM05D001809 ORTHO05D001802 4.8e-13 80.9 711 24.6
AUR62042171 Chenopodium quinoa HOM05D001809 ORTHO05D001802 1.8e-12 79.0 122 40.2
AUR62022413 Chenopodium quinoa HOM05D001809 ORTHO05D001802 2.4e-12 78.6 123 40.7
Hund17573 Selenicereus undatus HOM05D001809 ORTHO05D001802 5.3e-12 77.4 103 41.7
SHI08235 Sapria himalayana HOM05D001809 ORTHO05D000001 4.5e-11 74.3 241 27.4
Migut.C00590 Erythranthe guttata HOM05D001809 ORTHO05D001802 1.0e-10 73.2 99 44.4
ATR0100G035 Amborella trichopoda HOM05D001809 ORTHO05D001802 1.3e-10 72.8 131 38.9
unitig_32.g11127 Utricularia gibba HOM05D001809 ORTHO05D001802 8.4e-10 70.1 101 44.6
Glyma.06G039200 Glycine max HOM05D001809 ORTHO05D001802 1.4e-09 69.3 246 31.7
Lalb_Chr14g0368751 Lupinus albus HOM05D001809 ORTHO05D001802 5.5e-09 67.4 95 38.9
Lalb_Chr22g0355161 Lupinus albus HOM05D001809 ORTHO05D001802 7.1e-09 67.0 95 40.0
HanXRQChr09g0267881 Helianthus annuus HOM05D001809 ORTHO05D001802 4.6e-08 64.3 97 41.2
Lsat_1_v5_gn_4_125541 Lactuca sativa HOM05D001809 ORTHO05D001802 2.3e-07 62.0 285 24.6
BcaC04g21965 Brassica carinata HOM05D001809 ORTHO05D001802 3.9e-07 61.2 232 31.0
TAR629G1396 Trochodendron aralioides HOM05D001809 ORTHO05D001802 3.9e-07 61.2 98 40.8
HPP92_027217 Vanilla planifolia HOM05D001809 ORTHO05D001802 3.9e-07 61.2 166 32.5
THA.LOC104822848 Tarenaya hassleriana HOM05D001809 ORTHO05D001802 8.7e-07 60.1 137 32.8
PSO170G6383 Papaver somniferum HOM05D001809 ORTHO05D001802 7.4e-06 57.0 71 49.3
Medtr3g101590 Medicago truncatula HOM05D001809 ORTHO05D001802 9.7e-06 56.6 346 26.6

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (0 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (1 genes)
Brassica napus (0 genes)
Brassica oleracea (0 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (0 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (0 genes)
Carica papaya (1 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (0 genes)
Corchorus olitorius (1 genes)
Corylus avellana (2 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (2 genes)
Gossypium hirsutum (7 genes)
Gossypium raimondii (3 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (2 genes)
Lotus japonicus (1 genes)
Lupinus albus (3 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (3 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (0 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (2 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (0 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (0 genes)
Vitis vinifera (1 genes)
Zea mays (0 genes)

Program Settings