Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008927 Camellia sinensis var. sinensis HOM05D004148 ORTHO05D004709 4.8e-117 424.5 210 100.0
CSS0002631 Camellia sinensis var. sinensis HOM05D004148 ORTHO05D004709 1.4e-103 379.8 191 97.4
Actinidia12896 Actinidia chinensis HOM05D001400 ORTHO05D001795 2.1e-80 302.8 172 84.9
Dinv32838 Davidia involucrata HOM05D004148 ORTHO05D004709 7.1e-76 287.7 164 85.4
Duzib168G1551 Durio zibethinus HOM05D004148 ORTHO05D004709 2.1e-75 286.2 172 82.0
vmacro04062 Vaccinium macrocarpon HOM05D004148 ORTHO05D004709 8.6e-74 280.8 168 82.7
Gohir.D05G079200 Gossypium hirsutum HOM05D004148 ORTHO05D004709 1.1e-73 280.4 170 80.6
Gorai.009G080700 Gossypium raimondii HOM05D004148 ORTHO05D004709 1.5e-73 280.0 170 80.6
Thecc.09G266000 Theobroma cacao HOM05D004148 ORTHO05D004709 1.9e-73 279.6 172 80.8
RcHm_v2.0_Chr5g0049541 Rosa chinensis HOM05D004148 ORTHO05D004709 5.6e-73 278.1 174 77.0
Gohir.A05G076400 Gossypium hirsutum HOM05D004148 ORTHO05D004709 7.3e-73 277.7 170 79.4
Cfa010235 Carpinus fangiana HOM05D004148 ORTHO05D004709 6.2e-72 274.6 172 77.9
TAR623G1397 Trochodendron aralioides HOM05D004148 ORTHO05D004709 6.2e-72 274.6 185 73.5
Rhsim13G0199700 Rhododendron simsii HOM05D004148 ORTHO05D004709 1.8e-71 273.1 165 82.4
Prupe.6G151400 Prunus persica HOM05D004148 ORTHO05D004709 3.4e-70 268.9 174 75.3
Nn2g14486 Nelumbo nucifera HOM05D004148 ORTHO05D004709 4.4e-70 268.5 172 75.0
Atru.chr3.3014 Acer truncatum HOM05D004148 ORTHO05D004709 7.5e-70 267.7 164 81.7
GSVIVG01022379001 Vitis vinifera HOM05D004148 ORTHO05D004709 9.9e-70 267.3 172 76.2
Lalb_Chr16g0376251 Lupinus albus HOM05D004148 ORTHO05D004709 3.7e-69 265.4 172 74.4
FAN22G0787 Fragaria x ananassa HOM05D004148 ORTHO05D004709 4.9e-69 265.0 184 71.2
FAN17G2621 Fragaria x ananassa HOM05D004148 ORTHO05D004709 6.4e-69 264.6 174 74.7
Lj1g0011831 Lotus japonicus HOM05D004148 ORTHO05D004709 6.4e-69 264.6 182 70.9
TWI60G0836 Tripterygium wilfordii HOM05D004148 ORTHO05D004709 8.3e-69 264.2 192 69.8
Cc00_g06190 Coffea canephora HOM05D004148 ORTHO05D004709 1.4e-68 263.5 190 68.4
MD11G1178600 Malus domestica HOM05D004148 ORTHO05D004709 1.4e-68 263.5 174 74.7
Glyma.01G244400 Glycine max HOM05D004148 ORTHO05D004709 9.2e-68 260.8 164 76.8
CANSAT54G2785 Cannabis sativa HOM05D004148 ORTHO05D004709 2.7e-67 259.2 164 75.0
FvH4_4g33990 Fragaria vesca HOM05D004148 ORTHO05D004709 3.5e-67 258.8 164 77.4
FAN12G2472 Fragaria x ananassa HOM05D004148 ORTHO05D004709 6.0e-67 258.1 167 75.4
arahy.Tifrunner.gnm1.ann1.J94639 Arachis hypogaea HOM05D004148 ORTHO05D004709 1.0e-66 257.3 172 72.7
Potri.009G153300 Populus trichocarpa HOM05D004148 ORTHO05D004709 2.3e-66 256.1 175 74.3
ECA233G2337 Erigeron canadensis HOM05D004148 ORTHO05D004709 3.9e-66 255.4 168 75.0
Lsat_1_v5_gn_5_75780 Lactuca sativa HOM05D004148 ORTHO05D004709 3.9e-66 255.4 172 73.3
Medtr5g004880 Medicago truncatula HOM05D004148 ORTHO05D004709 3.9e-66 255.4 178 70.2
Phvul.002G053700 Phaseolus vulgaris HOM05D004148 ORTHO05D004709 3.9e-66 255.4 164 77.4
QL01p018674 Quercus lobata HOM05D004148 ORTHO05D004709 5.1e-66 255.0 173 74.0
VMungo1215G0285 Vigna mungo HOM05D004148 ORTHO05D004709 8.6e-66 254.2 164 76.2
Ciclev10027694m.g Citrus clementina HOM05D004148 ORTHO05D004709 1.9e-65 253.1 172 73.8
Ca_24340_v3 Cicer arietinum L. HOM05D004148 ORTHO05D004709 2.5e-65 252.7 164 75.0
HanXRQChr03g0089821 Helianthus annuus HOM05D004148 ORTHO05D004709 2.5e-65 252.7 175 70.9
Oeu048810.1 Olea europaea HOM05D004148 ORTHO05D004709 2.5e-65 252.7 165 72.7
Psat4g228400 Pisum sativum HOM05D004148 ORTHO05D004709 3.3e-65 252.3 167 74.3
FvH4_3g27030 Fragaria vesca HOM05D004148 ORTHO05D004709 2.8e-64 249.2 160 75.6
Sp5g17550 Schrenkiella parvula HOM05D004148 ORTHO05D004709 4.7e-64 248.4 178 67.4
Manes.04G054800 Manihot esculenta HOM05D004148 ORTHO05D004709 1.4e-63 246.9 174 72.4
Aqoxy1G00551 Aquilegia oxysepala HOM05D004148 ORTHO05D004709 3.1e-63 245.7 172 70.3
PSO339G2294 Papaver somniferum HOM05D004148 ORTHO05D004709 4.0e-63 245.4 170 70.0
Peaxi162Scf00217g00627 Petunia axillaris HOM05D004148 ORTHO05D004709 6.8e-63 244.6 170 70.0
BcaC01g02217 Brassica carinata HOM05D004148 ORTHO05D004709 1.2e-62 243.8 166 70.5
PSO384G5014 Papaver somniferum HOM05D004148 ORTHO05D004709 1.2e-62 243.8 170 70.0
AL5G21540 Arabidopsis lyrata HOM05D004148 ORTHO05D004709 1.5e-62 243.4 176 67.0
CiPaw.13G126900 Carya illinoinensis HOM05D004148 ORTHO05D004709 1.5e-62 243.4 172 70.3
BcaB02g10777 Brassica carinata HOM05D004148 ORTHO05D004709 2.6e-62 242.7 166 69.9
Solyc11g071570.3 Solanum lycopersicum HOM05D004148 ORTHO05D004709 4.4e-62 241.9 170 68.8
Sopen11g029250 Solanum pennellii HOM05D004148 ORTHO05D004709 7.6e-62 241.1 170 68.2
Thhalv10002374m.g Eutrema salsugineum HOM05D004148 ORTHO05D004709 9.9e-62 240.7 170 67.1
EL10Ac7g16248 Beta vulgaris HOM05D004148 ORTHO05D004709 1.7e-61 240.0 164 70.1
BraA06t25067Z Brassica rapa HOM05D004148 ORTHO05D004709 1.7e-61 240.0 166 70.5
AT3G43610 Arabidopsis thaliana HOM05D004148 ORTHO05D004709 2.2e-61 239.6 176 65.9
A06p19850 Brassica napus HOM05D004148 ORTHO05D004709 2.2e-61 239.6 166 70.5
PGR102G2778 Punica granatum HOM05D004148 ORTHO05D004709 2.9e-61 239.2 174 67.2
Sc06g0008560 Simmondsia chinensis HOM05D004148 ORTHO05D004709 3.8e-61 238.8 176 66.5
Carub.0005s0933 Capsella rubella HOM05D004148 ORTHO05D004709 4.9e-61 238.4 176 64.2
Aa31LG4G13420 Aethionema arabicum HOM05D004148 ORTHO05D004709 6.4e-61 238.0 169 65.7
MSTRG.21311 Avicennia marina HOM05D004148 ORTHO05D004709 1.4e-60 236.9 172 68.0
BcaC01g01775 Brassica carinata HOM05D004148 ORTHO05D004709 1.4e-60 236.9 166 69.3
C03p72000 Brassica napus HOM05D004148 ORTHO05D004709 1.4e-60 236.9 166 69.3
BolC3t19498H Brassica oleracea HOM05D004148 ORTHO05D004709 1.4e-60 236.9 166 69.3
THA.LOC104815063 Tarenaya hassleriana HOM05D004148 ORTHO05D004709 2.4e-60 236.1 176 64.8
MELO3C020298.2 Cucumis melo HOM05D004148 ORTHO05D004709 1.6e-59 233.4 172 65.1
CAN.G439.18 Capsicum annuum HOM05D004148 ORTHO05D004709 2.1e-59 233.0 170 66.5
Sed0012220 Sechium edule HOM05D004148 ORTHO05D004709 2.1e-59 233.0 172 67.4
CsaV3_3G017640 Cucumis sativus L. HOM05D004148 ORTHO05D004709 6.0e-59 231.5 172 65.1
Carub.0005s0948 Capsella rubella HOM05D004148 ORTHO05D004709 7.8e-59 231.1 176 63.1
Ah.15g099170 Amaranthus hybridus HOM05D004148 ORTHO05D004709 1.0e-58 230.7 152 71.7
ClCG05G010880 Citrullus lanatus HOM05D004148 ORTHO05D004709 3.0e-58 229.2 165 67.9
Hund18819 Selenicereus undatus HOM05D004148 ORTHO05D004709 3.0e-58 229.2 164 68.3
Nitab4.5_0000615g0090 Nicotiana tabacum HOM05D004148 ORTHO05D004709 3.9e-58 228.8 169 65.1
Migut.D00721 Erythranthe guttata HOM05D004148 ORTHO05D004709 5.1e-58 228.4 164 67.7
MBI11_g07705_MAGBIO Magnolia biondii HOM05D004148 ORTHO05D004709 2.5e-57 226.1 164 68.9
Nitab4.5_0005222g0040 Nicotiana tabacum HOM05D004148 ORTHO05D004709 2.5e-57 226.1 177 63.8
AUR62001591 Chenopodium quinoa HOM05D004148 ORTHO05D004709 7.3e-57 224.6 157 68.2
SGA_v2.0_scaffold29G12109 Striga asiatica HOM05D004148 ORTHO05D004709 1.6e-56 223.4 164 64.6
CARHR289540 Cardamine hirsuta HOM05D004148 ORTHO05D004709 1.1e-55 220.7 151 70.9
SalBow6G3333 Salvia bowleyana HOM05D004148 ORTHO05D004709 1.8e-55 219.9 164 64.6
MD03G1162300 Malus domestica HOM05D004148 ORTHO05D004709 2.6e-54 216.1 157 71.3
ATR0697G020 Amborella trichopoda HOM05D004148 ORTHO05D004709 2.7e-51 206.1 166 59.6
Cpa.g.sc103.96 Carica papaya HOM05D004148 ORTHO05D004709 2.3e-50 203.0 127 74.8
Zm00001eb073760 Zea mays HOM05D004148 ORTHO05D004709 5.1e-50 201.8 177 55.9
unitig_21.g20311 Utricularia gibba HOM05D004148 ORTHO05D004709 2.8e-48 196.1 180 51.7
DCAR_012264 Daucus carota HOM05D000495 ORTHO05D000357 1.2e-46 190.7 157 62.4
Zm00001eb428880 Zea mays HOM05D004148 ORTHO05D004709 1.2e-46 190.7 176 52.3
Hma1.2p1_0218F.1_g092390 Hydrangea macrophylla HOM05D004148 ORTHO05D004709 4.9e-45 185.3 141 68.8
BcaB01g00875 Brassica carinata HOM05D004148 ORTHO05D004709 1.4e-39 167.2 166 54.2
Lj2A891G11 Lonicera japonica HOM05D004148 ORTHO05D004709 5.8e-38 161.8 113 69.0
Haze_23626 Corylus avellana HOM05D004148 ORTHO05D004709 1.3e-34 150.6 82 85.4
Mapoly0099s0003 Marchantia polymorpha HOM05D004148 ORTHO05D004709 1.9e-33 146.7 176 43.2
AagrBONN_evm.TU.Sc2ySwM_228.375 Anthoceros agrestis HOM05D004148 ORTHO05D004709 1.6e-32 143.7 184 41.3
Pp3c11_24620 Physcomitrium patens HOM05D004148 ORTHO05D004709 2.8e-32 142.9 187 38.5
CARHR148720 Cardamine hirsuta HOM05D004148 ORTHO05D004709 1.1e-31 141.0 152 52.6
CBR_g23077 Chara braunii HOM05D004148 ORTHO05D004709 1.9e-25 120.2 205 37.1
SHI25292 Sapria himalayana HOM05D004148 ORTHO05D004709 5.7e-25 118.6 113 57.5
AUR62020189 Chenopodium quinoa HOM05D004148 ORTHO05D004709 2.4e-23 113.2 164 44.5
SMO172G0086 Selaginella moellendorffii HOM05D004148 ORTHO05D004709 2.0e-22 110.2 127 41.7
SHI25291 Sapria himalayana HOM05D004148 ORTHO05D004709 2.0e-17 93.6 63 65.1
Os04g0566800 Oryza sativa ssp. japonica HOM05D004148 ORTHO05D004709 2.8e-16 89.7 82 52.4
Zm00001eb043190 Zea mays HOM05D004148 ORTHO05D006109 6.3e-16 88.6 73 63.0
CDE07G1769 Ceratophyllum demersum HOM05D004148 ORTHO05D004709 5.0e-13 79.0 66 56.1
Psat3g010920 Pisum sativum HOM05D004148 ORTHO05D004709 2.2e-08 63.5 42 73.8
MD03G1288900 Malus domestica HOM05D000880 ORTHO05D007053 2.8e-08 63.2 155 25.8
Sed0026689 Sechium edule HOM05D000880 ORTHO05D007053 4.1e-07 59.3 167 23.4
Cfa021858 Carpinus fangiana HOM05D004581 ORTHO05D006211 5.3e-07 58.9 161 28.6
Prupe.8G262200 Prunus persica HOM05D000880 ORTHO05D007053 9.1e-07 58.2 157 23.6
HPP92_007056 Vanilla planifolia HOM05D000880 ORTHO05D007053 1.2e-06 57.8 159 23.9
Atru.chr5.1139 Acer truncatum HOM05D000880 ORTHO05D007053 2.0e-06 57.0 161 23.0
CBR_g7989 Chara braunii HOM05D004581 ORTHO05D006211 2.0e-06 57.0 168 25.6
arahy.Tifrunner.gnm1.ann1.1T2QZ7 Arachis hypogaea HOM05D005083 ORTHO05D006310 3.5e-06 56.2 171 24.6
arahy.Tifrunner.gnm1.ann1.PCAY5Y Arachis hypogaea HOM05D005083 ORTHO05D006310 3.5e-06 56.2 171 24.6
Phvul.007G147200 Phaseolus vulgaris HOM05D000880 ORTHO05D007053 3.5e-06 56.2 154 24.0
Psat4g206560 Pisum sativum HOM05D005083 ORTHO05D006310 3.5e-06 56.2 203 23.6
AL5G34740 Arabidopsis lyrata HOM05D000880 ORTHO05D007053 4.5e-06 55.8 156 25.6
Carub.0005s2034 Capsella rubella HOM05D000880 ORTHO05D007053 4.5e-06 55.8 156 25.6
CARHR163650 Cardamine hirsuta HOM05D000880 ORTHO05D007053 4.5e-06 55.8 159 25.2
Phvul.010G031700 Phaseolus vulgaris HOM05D005083 ORTHO05D006310 4.5e-06 55.8 199 23.6
TPR.G28978 Trifolium pratense HOM05D005083 ORTHO05D006310 4.5e-06 55.8 203 23.6
Zm00001eb314430 Zea mays HOM05D004581 ORTHO05D006211 4.5e-06 55.8 175 25.1
AT3G53760 Arabidopsis thaliana HOM05D000880 ORTHO05D007053 5.9e-06 55.5 157 26.1
Ca_30805_v3 Cicer arietinum L. HOM05D005083 ORTHO05D006310 5.9e-06 55.5 203 23.6
ClCG03G013010 Citrullus lanatus HOM05D000880 ORTHO05D007053 5.9e-06 55.5 210 20.5
Glyma.20G051200 Glycine max HOM05D005083 ORTHO05D006310 5.9e-06 55.5 179 23.5
MD11G1309000 Malus domestica HOM05D000880 ORTHO05D007053 7.7e-06 55.1 183 24.0

Acer truncatum (2 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (3 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (3 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (3 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (2 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (2 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (0 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (3 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (4 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (3 genes)
Physcomitrium patens (1 genes)
Pisum sativum (3 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (2 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (0 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (2 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (0 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (4 genes)

Program Settings