Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007105 Camellia sinensis var. sinensis HOM05D003184 ORTHO05D000394 7.0e-60 233.8 122 100.0
CSS0009721 Camellia sinensis var. sinensis HOM05D003184 ORTHO05D000394 1.1e-44 183.3 111 88.3
Actinidia36831 Actinidia chinensis HOM05D003184 ORTHO05D000394 4.6e-27 124.8 106 60.4
Actinidia08895 Actinidia chinensis HOM05D003184 ORTHO05D000394 7.8e-27 124.0 112 58.9
CSS0031765 Camellia sinensis var. sinensis HOM05D003184 ORTHO05D000394 2.5e-25 119.0 106 62.3
Dinv23196 Davidia involucrata HOM05D003184 ORTHO05D000394 1.3e-24 116.7 106 57.5
Actinidia18321 Actinidia chinensis HOM05D003184 ORTHO05D000394 1.6e-24 116.3 114 59.6
Dinv11214 Davidia involucrata HOM05D003184 ORTHO05D000394 2.8e-24 115.5 110 53.6
Rhsim08G0194800 Rhododendron simsii HOM05D003184 ORTHO05D000394 1.3e-21 106.7 112 54.5
vmacro19159 Vaccinium macrocarpon HOM05D003184 ORTHO05D000394 8.4e-21 104.0 116 51.7
Actinidia25537 Actinidia chinensis HOM05D003184 ORTHO05D000394 1.4e-20 103.2 106 54.7
Nitab4.5_0000033g0210 Nicotiana tabacum HOM05D003184 ORTHO05D000394 9.3e-20 100.5 104 51.9
Nitab4.5_0000854g0010 Nicotiana tabacum HOM05D003184 ORTHO05D000394 1.6e-19 99.8 111 50.5
Solyc06g072530.3 Solanum lycopersicum HOM05D003184 ORTHO05D000394 7.9e-19 97.4 104 49.0
Sopen06g028900 Solanum pennellii HOM05D003184 ORTHO05D000394 1.0e-18 97.1 104 49.0
Lj9A484T61 Lonicera japonica HOM05D003184 ORTHO05D000394 1.7e-18 96.3 112 46.4
Solyc06g072550.3 Solanum lycopersicum HOM05D003184 ORTHO05D000394 1.5e-17 93.2 94 54.3
Sopen06g028910 Solanum pennellii HOM05D003184 ORTHO05D000394 1.5e-17 93.2 94 54.3
PGSC0003DMG400026945 Solanum tuberosum HOM05D003184 ORTHO05D000394 1.5e-17 93.2 104 47.1
SGA_v2.0_scaffold40G15593 Striga asiatica HOM05D003184 ORTHO05D000394 3.3e-17 92.0 104 49.0
Nitab4.5_0017715g0010 Nicotiana tabacum HOM05D003184 ORTHO05D000394 4.3e-17 91.7 104 47.1
Rhsim12G0178600 Rhododendron simsii HOM05D003184 ORTHO05D000394 4.3e-17 91.7 106 50.0
Cc04_g09480 Coffea canephora HOM05D003184 ORTHO05D000394 5.6e-17 91.3 111 46.8
PGSC0003DMG400026944 Solanum tuberosum HOM05D003184 ORTHO05D000394 9.6e-17 90.5 94 53.2
Oeu030646.1 Olea europaea HOM05D003184 ORTHO05D000394 4.8e-16 88.2 95 46.3
Peaxi162Scf00171g01125 Petunia axillaris HOM05D003184 ORTHO05D000394 4.8e-16 88.2 104 45.2
TAR622G0113 Trochodendron aralioides HOM05D003184 ORTHO05D000394 4.8e-16 88.2 112 41.1
Peaxi162Scf01064g00117 Petunia axillaris HOM05D003184 ORTHO05D000394 1.1e-15 87.0 109 44.0
Thecc.03G137300 Theobroma cacao HOM05D003184 ORTHO05D000394 1.1e-15 87.0 106 43.4
Nitab4.5_0001825g0030 Nicotiana tabacum HOM05D003184 ORTHO05D000394 1.4e-15 86.7 109 43.1
TWI23G0846 Tripterygium wilfordii HOM05D003184 ORTHO05D000394 1.8e-15 86.3 98 43.9
Peaxi162Scf01064g00114 Petunia axillaris HOM05D003184 ORTHO05D000394 3.1e-15 85.5 94 48.9
Migut.O00352 Erythranthe guttata HOM05D003184 ORTHO05D000394 4.0e-15 85.1 102 48.0
HanXRQChr16g0498791 Helianthus annuus HOM05D003184 ORTHO05D000394 5.3e-15 84.7 109 39.4
Nitab4.5_0001451g0040 Nicotiana tabacum HOM05D003184 ORTHO05D000394 9.0e-15 84.0 104 42.3
GSVIVG01008618001 Vitis vinifera HOM05D003184 ORTHO05D000394 9.0e-15 84.0 105 43.8
ECA232G0468 Erigeron canadensis HOM05D003184 ORTHO05D000394 2.0e-14 82.8 109 40.4
Lj5A91T55 Lonicera japonica HOM05D003184 ORTHO05D000394 2.0e-14 82.8 111 45.0
MSTRG.22885 Avicennia marina HOM05D003184 ORTHO05D000394 2.6e-14 82.4 103 41.7
TWI14G0265 Tripterygium wilfordii HOM05D003184 ORTHO05D000394 2.6e-14 82.4 108 39.8
CiPaw.11G002400 Carya illinoinensis HOM05D003184 ORTHO05D000394 5.8e-14 81.3 104 43.3
HanXRQChr09g0273611 Helianthus annuus HOM05D003184 ORTHO05D000394 5.8e-14 81.3 109 38.5
Peaxi162Scf01064g00115 Petunia axillaris HOM05D003184 ORTHO05D000394 7.6e-14 80.9 109 44.0
TAR374G1504 Trochodendron aralioides HOM05D003184 ORTHO05D000394 1.7e-13 79.7 91 47.3
MSTRG.4625 Avicennia marina HOM05D003184 ORTHO05D000394 2.2e-13 79.3 104 41.3
Duzib084G1317 Durio zibethinus HOM05D003184 ORTHO05D000394 2.9e-13 79.0 113 40.7
FAN13G0038 Fragaria x ananassa HOM05D003184 ORTHO05D000394 2.9e-13 79.0 106 42.5
SalBow1G6178 Salvia bowleyana HOM05D003184 ORTHO05D000394 2.9e-13 79.0 93 41.9
Prupe.5G144900 Prunus persica HOM05D003184 ORTHO05D000394 3.8e-13 78.6 111 38.7
RcHm_v2.0_Chr7g0189121 Rosa chinensis HOM05D003184 ORTHO05D000394 3.8e-13 78.6 106 43.4
Sc07g0003650 Simmondsia chinensis HOM05D003184 ORTHO05D000394 6.4e-13 77.8 93 39.8
Migut.D01302 Erythranthe guttata HOM05D003184 ORTHO05D000394 8.4e-13 77.4 94 44.7
Nitab4.5_0001825g0040 Nicotiana tabacum HOM05D003184 ORTHO05D000394 8.4e-13 77.4 110 46.4
COL.COLO4_16682 Corchorus olitorius HOM05D003184 ORTHO05D000394 1.9e-12 76.3 114 36.8
Gohir.D11G041000 Gossypium hirsutum HOM05D003184 ORTHO05D000394 3.2e-12 75.5 114 40.4
Gorai.007G044200 Gossypium raimondii HOM05D003184 ORTHO05D000394 3.2e-12 75.5 114 40.4
Lsat_1_v5_gn_4_82801 Lactuca sativa HOM05D003184 ORTHO05D000394 3.2e-12 75.5 106 36.8
Gohir.A11G037800 Gossypium hirsutum HOM05D003184 ORTHO05D000394 4.2e-12 75.1 114 40.4
Gorai.006G000900 Gossypium raimondii HOM05D003184 ORTHO05D000394 4.2e-12 75.1 107 41.1
QL10p001098 Quercus lobata HOM05D003184 ORTHO05D000394 4.2e-12 75.1 105 38.1
FAN08G1332 Fragaria x ananassa HOM05D003184 ORTHO05D000394 7.1e-12 74.3 106 40.6
MD14G1150200 Malus domestica HOM05D003184 ORTHO05D000394 7.1e-12 74.3 110 37.3
Cfa003173 Carpinus fangiana HOM05D003184 ORTHO05D000394 9.3e-12 73.9 104 38.5
FvH4_5g09090 Fragaria vesca HOM05D003184 ORTHO05D000394 9.3e-12 73.9 106 41.5
FAN18G2274 Fragaria x ananassa HOM05D003184 ORTHO05D000394 9.3e-12 73.9 106 41.5
Gohir.D09G000800 Gossypium hirsutum HOM05D003184 ORTHO05D000394 1.2e-11 73.6 95 42.1
PGSC0003DMG400012025 Solanum tuberosum HOM05D003184 ORTHO05D000394 1.2e-11 73.6 104 39.4
Nn4g22197 Nelumbo nucifera HOM05D003184 ORTHO05D000394 2.1e-11 72.8 86 46.5
Potri.015G103600 Populus trichocarpa HOM05D003184 ORTHO05D000394 2.1e-11 72.8 104 39.4
Gorai.001G274100 Gossypium raimondii HOM05D003184 ORTHO05D000394 2.7e-11 72.4 97 42.3
Gorai.006G272700 Gossypium raimondii HOM05D003184 ORTHO05D000394 2.7e-11 72.4 114 40.4
Actinidia23302 Actinidia chinensis HOM05D003184 ORTHO05D000394 4.6e-11 71.6 88 45.5
MD06G1133900 Malus domestica HOM05D003184 ORTHO05D000394 4.6e-11 71.6 110 35.5
Haze_14924 Corylus avellana HOM05D003184 ORTHO05D000394 6.0e-11 71.2 106 34.9
Potri.012G104300 Populus trichocarpa HOM05D003184 ORTHO05D000394 6.0e-11 71.2 106 38.7
Gohir.D07G238300 Gossypium hirsutum HOM05D003184 ORTHO05D000394 7.9e-11 70.9 97 41.2
Gohir.D09G248400 Gossypium hirsutum HOM05D003184 ORTHO05D000394 7.9e-11 70.9 114 40.4
Atru.chr6.2627 Acer truncatum HOM05D003184 ORTHO05D000394 1.0e-10 70.5 91 40.7
Atru.chr6.2662 Acer truncatum HOM05D003184 ORTHO05D000394 1.0e-10 70.5 91 40.7
Dinv25627 Davidia involucrata HOM05D003184 ORTHO05D000394 1.0e-10 70.5 92 40.2
Atru.chr6.2626 Acer truncatum HOM05D003184 ORTHO05D000394 1.3e-10 70.1 94 40.4
Sc10g0010710 Simmondsia chinensis HOM05D003184 ORTHO05D000394 1.3e-10 70.1 87 42.5
Sc10g0010800 Simmondsia chinensis HOM05D003184 ORTHO05D000394 1.3e-10 70.1 87 42.5
Solyc03g097720.4 Solanum lycopersicum HOM05D003184 ORTHO05D000394 1.3e-10 70.1 104 38.5
Dinv33298 Davidia involucrata HOM05D003184 ORTHO05D000394 1.8e-10 69.7 92 38.0
Duzib187G1178 Durio zibethinus HOM05D003184 ORTHO05D000394 1.8e-10 69.7 107 39.3
Hma1.2p1_0421F.1_g150040 Hydrangea macrophylla HOM05D003184 ORTHO05D000394 2.3e-10 69.3 91 34.1
Nitab4.5_0002773g0040 Nicotiana tabacum HOM05D003184 ORTHO05D000394 2.3e-10 69.3 100 41.0
PGR142G2053 Punica granatum HOM05D003184 ORTHO05D000394 2.3e-10 69.3 104 37.5
FAN04G2802 Fragaria x ananassa HOM05D003184 ORTHO05D000394 3.0e-10 68.9 106 41.5
Peaxi162Scf00171g01124 Petunia axillaris HOM05D003184 ORTHO05D000394 3.9e-10 68.6 105 47.6
EL10Ac5g11337 Beta vulgaris HOM05D003184 ORTHO05D000394 5.1e-10 68.2 92 42.4
Rhsim10G0002700 Rhododendron simsii HOM05D003184 ORTHO05D000394 5.1e-10 68.2 93 38.7
Sabra12G0076700 Salix brachista HOM05D003184 ORTHO05D000394 5.1e-10 68.2 112 33.0
Sabra15G0123100 Salix brachista HOM05D003184 ORTHO05D000394 5.1e-10 68.2 104 38.5
SGA_v2.0_scaffold44G16941 Striga asiatica HOM05D003184 ORTHO05D000394 5.1e-10 68.2 91 37.4
Thecc.04G043600 Theobroma cacao HOM05D003184 ORTHO05D000394 6.7e-10 67.8 107 38.3
Duzib068G0614 Durio zibethinus HOM05D003184 ORTHO05D000394 8.7e-10 67.4 113 38.1
Nitab4.5_0001451g0020 Nicotiana tabacum HOM05D003184 ORTHO05D000394 8.7e-10 67.4 104 43.3
Haze_07123 Corylus avellana HOM05D003184 ORTHO05D000394 1.5e-09 66.6 104 36.5
EL10Ac6g13375 Beta vulgaris HOM05D003184 ORTHO05D000394 2.5e-09 65.9 92 32.6
Ciclev10016868m.g Citrus clementina HOM05D003184 ORTHO05D000394 2.5e-09 65.9 91 37.4
Cpa.g.sc70.94 Carica papaya HOM05D003184 ORTHO05D000394 3.3e-09 65.5 107 38.3
Cfa018731 Carpinus fangiana HOM05D003184 ORTHO05D000394 3.3e-09 65.5 104 35.6
Gohir.A07G231100 Gossypium hirsutum HOM05D003184 ORTHO05D000394 3.3e-09 65.5 97 38.1
Manes.06G124500 Manihot esculenta HOM05D003184 ORTHO05D000394 3.3e-09 65.5 105 35.2
Manes.14G046800 Manihot esculenta HOM05D003184 ORTHO05D000394 4.3e-09 65.1 110 33.6
Ciclev10032880m.g Citrus clementina HOM05D003184 ORTHO05D000394 5.6e-09 64.7 91 40.7
CsaV3_1G000220 Cucumis sativus L. HOM05D003184 ORTHO05D000394 7.4e-09 64.3 112 36.6
Eucgr.I01612 Eucalyptus grandis HOM05D003184 ORTHO05D000394 9.6e-09 63.9 94 38.3
MD09G1005700 Malus domestica HOM05D003184 ORTHO05D000394 9.6e-09 63.9 103 35.9
Sabra16G0206400 Salix brachista HOM05D003184 ORTHO05D000394 9.6e-09 63.9 94 37.2
SalBow5G4450 Salvia bowleyana HOM05D003184 ORTHO05D000394 9.6e-09 63.9 92 40.2
Migut.F00025 Erythranthe guttata HOM05D003184 ORTHO05D000394 1.3e-08 63.5 91 37.4
Potri.017G062100 Populus trichocarpa HOM05D003184 ORTHO05D000394 1.3e-08 63.5 113 35.4
ATR0582G013 Amborella trichopoda HOM05D003184 ORTHO05D000394 2.8e-08 62.4 101 40.6
Solyc03g097730.2 Solanum lycopersicum HOM05D003184 ORTHO05D000394 2.8e-08 62.4 110 41.8
Sed0014743 Sechium edule HOM05D003184 ORTHO05D000394 3.7e-08 62.0 89 43.8
Cpa.g.sc4.123 Carica papaya HOM05D003184 ORTHO05D000394 4.8e-08 61.6 75 40.0
CiPaw.04G002500 Carya illinoinensis HOM05D003184 ORTHO05D000394 4.8e-08 61.6 103 35.0
Oeu045571.1 Olea europaea HOM05D003184 ORTHO05D000394 4.8e-08 61.6 102 30.4
Manes.04G090520 Manihot esculenta HOM05D003184 ORTHO05D000394 6.2e-08 61.2 92 33.7
SalBow4G2503 Salvia bowleyana HOM05D003184 ORTHO05D000394 1.1e-07 60.5 92 31.5
PGR083G0980 Punica granatum HOM05D003184 ORTHO05D000394 1.4e-07 60.1 96 38.5
Nn3g16336 Nelumbo nucifera HOM05D003184 ORTHO05D000394 1.8e-07 59.7 86 40.7
Hund04246 Selenicereus undatus HOM05D003184 ORTHO05D000394 1.8e-07 59.7 110 32.7
Potri.001G323700 Populus trichocarpa HOM05D003184 ORTHO05D000394 2.4e-07 59.3 104 36.5
FAN05G1263 Fragaria x ananassa HOM05D003184 ORTHO05D000394 4.0e-07 58.5 100 34.0
Lj1g0015749 Lotus japonicus HOM05D003184 ORTHO05D000394 5.3e-07 58.2 111 31.5
FAN02G3218 Fragaria x ananassa HOM05D003184 ORTHO05D000394 6.9e-07 57.8 100 34.0
FAN02G3850 Fragaria x ananassa HOM05D003184 ORTHO05D000394 6.9e-07 57.8 100 34.0
QL02p070196 Quercus lobata HOM05D003184 ORTHO05D000394 9.0e-07 57.4 102 31.4
unitig_26.g9747 Utricularia gibba HOM05D003184 ORTHO05D000394 9.0e-07 57.4 104 33.7
ATR0582G016 Amborella trichopoda HOM05D000748 ORTHO05D000394 1.2e-06 57.0 94 34.0
CDE01G0830 Ceratophyllum demersum HOM05D003184 ORTHO05D000394 1.2e-06 57.0 106 36.8
Cc07_g01140 Coffea canephora HOM05D003184 ORTHO05D000394 1.2e-06 57.0 98 35.7
Peaxi162Scf00358g01216 Petunia axillaris HOM05D003184 ORTHO05D000394 1.2e-06 57.0 96 36.5
vmacro19157 Vaccinium macrocarpon HOM05D003184 ORTHO05D000394 1.2e-06 57.0 46 63.0
ATR0582G135 Amborella trichopoda HOM05D000748 ORTHO05D000394 2.6e-06 55.8 110 34.5
arahy.Tifrunner.gnm1.ann1.KQH5YQ Arachis hypogaea HOM05D003184 ORTHO05D000394 2.6e-06 55.8 89 31.5
arahy.Tifrunner.gnm1.ann1.N0DIBZ Arachis hypogaea HOM05D003184 ORTHO05D000394 2.6e-06 55.8 89 31.5
MSTRG.24117 Avicennia marina HOM05D003184 ORTHO05D000394 2.6e-06 55.8 91 36.3
MELO3C026176.2 Cucumis melo HOM05D003184 ORTHO05D000394 2.6e-06 55.8 101 39.6
Sc22g0003570 Simmondsia chinensis HOM05D003184 ORTHO05D000394 4.5e-06 55.1 91 35.2

Acer truncatum (3 genes)
Actinidia chinensis (5 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (3 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (2 genes)
Avicennia marina (3 genes)
Beta vulgaris (2 genes)
Brassica carinata (0 genes)
Brassica napus (0 genes)
Brassica oleracea (0 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (3 genes)
Cannabis sativa (0 genes)
Capsella rubella (0 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (0 genes)
Carica papaya (2 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (0 genes)
Citrus clementina (2 genes)
Coffea canephora (2 genes)
Corchorus olitorius (1 genes)
Corylus avellana (2 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (0 genes)
Davidia involucrata (4 genes)
Durio zibethinus (3 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (3 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (7 genes)
Glycine max (0 genes)
Gossypium hirsutum (6 genes)
Gossypium raimondii (4 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (2 genes)
Lotus japonicus (1 genes)
Lupinus albus (0 genes)
Magnolia biondii (0 genes)
Malus domestica (3 genes)
Manihot esculenta (3 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (8 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (6 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (0 genes)
Populus trichocarpa (4 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (2 genes)
Quercus lobata (2 genes)
Rhododendron simsii (3 genes)
Rosa chinensis (1 genes)
Salix brachista (3 genes)
Salvia bowleyana (3 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (4 genes)
Solanum lycopersicum (4 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (3 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (2 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (1 genes)
Zea mays (0 genes)

Program Settings