Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006134 Camellia sinensis var. sinensis HOM05D005355 ORTHO05D006591 5.0e-229 797.7 496 100.0
CSS0023513 Camellia sinensis var. sinensis HOM05D005355 ORTHO05D006591 1.4e-228 796.2 496 98.0
GSVIVG01008886001 Vitis vinifera HOM05D005355 ORTHO05D006591 2.1e-134 483.4 459 64.1
RhsimUnG0093800 Rhododendron simsii HOM05D005355 ORTHO05D006591 3.6e-131 472.6 436 68.3
Potri.002G085000 Populus trichocarpa HOM05D005355 ORTHO05D006591 1.1e-124 451.1 461 60.7
MD15G1351600 Malus domestica HOM05D005355 ORTHO05D006591 2.2e-120 436.8 509 57.0
Manes.18G076200 Manihot esculenta HOM05D005355 ORTHO05D006591 2.2e-120 436.8 451 62.3
vmacro00824 Vaccinium macrocarpon HOM05D005355 ORTHO05D006591 6.5e-120 435.3 597 53.4
Sabra02G0066400 Salix brachista HOM05D005355 ORTHO05D006591 1.0e-117 427.9 483 56.5
CiPaw.05G223300 Carya illinoinensis HOM05D005355 ORTHO05D006591 8.7e-117 424.9 453 59.8
Dinv27329 Davidia involucrata HOM05D005355 ORTHO05D006591 1.1e-116 424.5 450 61.1
Ciclev10000938m.g Citrus clementina HOM05D005355 ORTHO05D006591 1.6e-115 420.6 456 57.2
CiPaw.06G029200 Carya illinoinensis HOM05D005355 ORTHO05D006591 5.3e-114 415.6 441 60.8
Thecc.08G123400 Theobroma cacao HOM05D005355 ORTHO05D006591 4.5e-113 412.5 473 55.6
VMungo1309G2754 Vigna mungo HOM05D005355 ORTHO05D006591 2.9e-112 409.8 435 58.9
Prupe.1G500200 Prunus persica HOM05D005355 ORTHO05D006591 5.5e-111 405.6 441 57.6
Duzib093G2154 Durio zibethinus HOM05D005355 ORTHO05D006591 9.3e-111 404.8 454 57.5
PGR044G2411 Punica granatum HOM05D005355 ORTHO05D006591 1.6e-110 404.1 454 55.7
Phvul.009G124200 Phaseolus vulgaris HOM05D005355 ORTHO05D006591 3.0e-109 399.8 455 57.1
QL09p035410 Quercus lobata HOM05D005355 ORTHO05D006591 8.7e-109 398.3 479 56.4
Sabra05G0133000 Salix brachista HOM05D005355 ORTHO05D006591 1.1e-108 397.9 557 49.6
Eucgr.F04357 Eucalyptus grandis HOM05D005355 ORTHO05D006591 1.9e-108 397.1 441 56.0
MD00G1157400 Malus domestica HOM05D005355 ORTHO05D006591 1.9e-108 397.1 492 54.3
Nn5g28219 Nelumbo nucifera HOM05D005355 ORTHO05D006591 3.7e-107 392.9 456 56.1
Gohir.A06G043600 Gossypium hirsutum HOM05D005355 ORTHO05D006591 2.4e-106 390.2 468 53.4
Gorai.010G049600 Gossypium raimondii HOM05D005355 ORTHO05D006591 2.4e-106 390.2 466 53.6
CsaV3_2G014020 Cucumis sativus L. HOM05D005355 ORTHO05D006591 4.1e-106 389.4 465 55.9
TAR625G0673 Trochodendron aralioides HOM05D005355 ORTHO05D006591 1.7e-104 384.0 438 56.4
TWI12G0790 Tripterygium wilfordii HOM05D005355 ORTHO05D006591 3.8e-104 382.9 432 56.9
CANSAT25G1794 Cannabis sativa HOM05D005355 ORTHO05D006591 1.4e-103 380.9 440 55.9
Glyma.04G250500 Glycine max HOM05D005355 ORTHO05D006591 4.2e-103 379.4 439 54.7
Gohir.D06G044400 Gossypium hirsutum HOM05D005355 ORTHO05D006591 5.5e-103 379.0 466 52.8
Duzib116G0422 Durio zibethinus HOM05D005355 ORTHO05D006591 2.3e-101 373.6 469 53.1
Gorai.009G245100 Gossypium raimondii HOM05D005355 ORTHO05D006591 8.8e-101 371.7 466 53.0
Potri.005G176400 Populus trichocarpa HOM05D005355 ORTHO05D006591 7.4e-100 368.6 537 48.2
Glyma.06G112300 Glycine max HOM05D005355 ORTHO05D006591 9.7e-100 368.2 440 53.9
arahy.Tifrunner.gnm1.ann1.SCI4MN Arachis hypogaea HOM05D005355 ORTHO05D006591 1.3e-99 367.9 461 54.4
Ca_15194_v3 Cicer arietinum L. HOM05D005355 ORTHO05D006591 2.2e-99 367.1 452 54.0
Hund27026 Selenicereus undatus HOM05D005355 ORTHO05D006591 1.8e-98 364.0 453 53.0
arahy.Tifrunner.gnm1.ann1.Y2U2DK Arachis hypogaea HOM05D005355 ORTHO05D006591 2.0e-97 360.5 456 54.2
PSO170G1761 Papaver somniferum HOM05D005355 ORTHO05D006591 2.0e-97 360.5 454 51.3
TWI56G0611 Tripterygium wilfordii HOM05D005355 ORTHO05D006591 1.3e-96 357.8 437 54.5
Medtr3g072480 Medicago truncatula HOM05D005355 ORTHO05D006591 5.0e-96 355.9 455 52.5
PSO528G0270 Papaver somniferum HOM05D005355 ORTHO05D006591 8.5e-96 355.1 452 50.9
Lj4A622G14 Lonicera japonica HOM05D005355 ORTHO05D006591 1.9e-95 354.0 399 61.4
FAN27G0453 Fragaria x ananassa HOM05D005355 ORTHO05D006591 5.5e-95 352.4 450 52.2
Lj1g0013612 Lotus japonicus HOM05D005355 ORTHO05D006591 7.2e-95 352.1 454 52.2
Gohir.A05G234400 Gossypium hirsutum HOM05D005355 ORTHO05D006591 2.0e-92 344.0 451 51.2
Lalb_Chr08g0241491 Lupinus albus HOM05D005355 ORTHO05D006591 2.0e-92 344.0 466 50.9
MSTRG.326 Avicennia marina HOM05D005355 ORTHO05D006591 2.8e-91 340.1 446 50.2
Gohir.D05G236700 Gossypium hirsutum HOM05D005355 ORTHO05D006591 6.3e-91 339.0 447 51.7
Cfa016002 Carpinus fangiana HOM05D005355 ORTHO05D006591 1.2e-89 334.7 384 56.8
FAN24G2565 Fragaria x ananassa HOM05D005355 ORTHO05D006591 3.5e-89 333.2 450 49.3
Psat5g132440 Pisum sativum HOM05D005355 ORTHO05D006591 6.5e-88 328.9 476 47.9
CAN.G127.21 Capsicum annuum HOM05D005355 ORTHO05D006591 8.5e-88 328.6 450 50.0
EL10Ac1g01045 Beta vulgaris HOM05D005355 ORTHO05D006591 1.5e-87 327.8 442 50.7
FAN20G1264 Fragaria x ananassa HOM05D005355 ORTHO05D006591 1.9e-87 327.4 450 48.4
ClCG08G005570 Citrullus lanatus HOM05D005355 ORTHO05D006591 4.2e-87 326.2 434 52.5
MBI06_g20714_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 4.2e-87 326.2 438 51.4
Thhalv10029139m.g Eutrema salsugineum HOM05D005355 ORTHO05D006591 8.0e-86 322.0 437 49.0
TPR.G24014 Trifolium pratense HOM05D005355 ORTHO05D006591 2.3e-85 320.5 453 48.1
Cpa.g.sc36.50 Carica papaya HOM05D005355 ORTHO05D006591 4.0e-85 319.7 450 47.6
Sp6g09690 Schrenkiella parvula HOM05D005355 ORTHO05D006591 2.6e-84 317.0 440 50.9
Cc00_g04310 Coffea canephora HOM05D005355 ORTHO05D006591 8.2e-83 312.0 420 47.1
MELO3C010600.2 Cucumis melo HOM05D005355 ORTHO05D006591 2.4e-82 310.5 416 51.0
THA.LOC104817273 Tarenaya hassleriana HOM05D005355 ORTHO05D006591 2.4e-82 310.5 432 50.2
RcHm_v2.0_Chr6g0295601 Rosa chinensis HOM05D005355 ORTHO05D006591 2.7e-81 307.0 433 48.0
Sc01g0001210 Simmondsia chinensis HOM05D005355 ORTHO05D006591 2.7e-81 307.0 396 51.5
Oeu062052.1 Olea europaea HOM05D005355 ORTHO05D006591 4.5e-81 306.2 449 47.4
Haze_00460 Corylus avellana HOM05D005355 ORTHO05D006591 1.3e-80 304.7 352 57.4
Sopen11g007660 Solanum pennellii HOM05D005355 ORTHO05D006591 1.7e-80 304.3 444 48.4
Aa31LG9G14260 Aethionema arabicum HOM05D005355 ORTHO05D006591 7.2e-79 298.9 435 49.7
Solyc11g012920.3 Solanum lycopersicum HOM05D005355 ORTHO05D006591 9.4e-79 298.5 443 47.2
DCAR_011614 Daucus carota HOM05D005355 ORTHO05D006591 6.1e-78 295.8 332 55.4
Atru.chr13.1433 Acer truncatum HOM05D005355 ORTHO05D006591 1.0e-77 295.0 272 65.1
SGA_v2.0_scaffold122G33176 Striga asiatica HOM05D005355 ORTHO05D006591 4.4e-76 289.7 433 48.3
ECA238G0419 Erigeron canadensis HOM05D005355 ORTHO05D006591 8.3e-75 285.4 441 46.3
Migut.F01876 Erythranthe guttata HOM05D005355 ORTHO05D006591 1.1e-74 285.0 455 44.2
Lsat_1_v5_gn_5_101461 Lactuca sativa HOM05D005355 ORTHO05D006591 3.1e-74 283.5 439 44.0
Thhalv10011453m.g Eutrema salsugineum HOM05D005355 ORTHO05D006591 7.7e-73 278.9 443 45.4
FAN15G2971 Fragaria x ananassa HOM05D005355 ORTHO05D006591 1.3e-72 278.1 474 43.5
AL6G42080 Arabidopsis lyrata HOM05D005355 ORTHO05D006591 1.1e-71 275.0 444 47.1
AL1G52440 Arabidopsis lyrata HOM05D005355 ORTHO05D006591 5.5e-71 272.7 470 43.6
FvH4_2g26711 Fragaria vesca HOM05D005355 ORTHO05D006591 1.4e-69 268.1 410 45.6
Nitab4.5_0001803g0130 Nicotiana tabacum HOM05D005355 ORTHO05D006591 1.4e-69 268.1 367 51.0
Aqoxy6G00187 Aquilegia oxysepala HOM05D005355 ORTHO05D006591 1.8e-69 267.7 455 44.4
BcaB07g33934 Brassica carinata HOM05D005355 ORTHO05D006591 8.9e-69 265.4 415 45.3
CARHR259390 Cardamine hirsuta HOM05D005355 ORTHO05D006591 1.5e-68 264.6 434 44.0
C06p00770 Brassica napus HOM05D005355 ORTHO05D006591 4.4e-68 263.1 446 42.2
BraSC36t46079Z Brassica rapa HOM05D005355 ORTHO05D006591 4.4e-68 263.1 427 44.5
AT4G08310 Arabidopsis thaliana HOM05D005355 ORTHO05D006591 7.5e-68 262.3 433 46.4
A10p07350 Brassica napus HOM05D005355 ORTHO05D006591 1.3e-67 261.5 427 45.0
Carub.0006s2687 Capsella rubella HOM05D005355 ORTHO05D006591 1.3e-67 261.5 425 48.5
MBI15_g20159_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 1.3e-67 261.5 431 44.5
Os11g0544600 Oryza sativa ssp. japonica HOM05D005355 ORTHO05D006591 3.7e-67 260.0 461 40.8
HanXRQChr04g0109451 Helianthus annuus HOM05D005355 ORTHO05D006591 1.4e-66 258.1 446 43.7
Sp1g33640 Schrenkiella parvula HOM05D005355 ORTHO05D006591 1.4e-66 258.1 442 43.7
MBI15_g24178_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 7.8e-65 252.3 424 46.2
Zm00001eb113700 Zea mays HOM05D005355 ORTHO05D006591 1.0e-64 251.9 444 42.6
AT1G44780 Arabidopsis thaliana HOM05D005355 ORTHO05D006591 1.1e-63 248.4 447 42.5
AUR62019052 Chenopodium quinoa HOM05D005355 ORTHO05D006591 2.5e-63 247.3 384 47.9
ATR0104G007 Amborella trichopoda HOM05D005355 ORTHO05D006591 4.3e-63 246.5 453 41.1
CDE06G1640 Ceratophyllum demersum HOM05D005355 ORTHO05D006591 3.0e-61 240.4 413 43.1
unitig_52.g17510 Utricularia gibba HOM05D005355 ORTHO05D006467 3.0e-61 240.4 467 39.6
SHI29459 Sapria himalayana HOM05D005355 ORTHO05D006591 1.2e-60 238.4 417 41.5
BolC6t35219H Brassica oleracea HOM05D005355 ORTHO05D006591 4.4e-60 236.5 433 40.6
CARHR036040 Cardamine hirsuta HOM05D005355 ORTHO05D006591 2.2e-59 234.2 451 43.5
COL.COLO4_35946 Corchorus olitorius HOM05D005355 ORTHO05D006591 1.1e-58 231.9 417 43.2
Sed0010827 Sechium edule HOM05D005355 ORTHO05D006591 3.2e-58 230.3 340 49.4
BcaC08g42867 Brassica carinata HOM05D005355 ORTHO05D006591 6.0e-57 226.1 445 39.3
Atru.chr13.1434 Acer truncatum HOM05D005355 ORTHO05D006591 3.5e-41 173.7 183 57.4
AUR62027892 Chenopodium quinoa HOM05D005355 ORTHO05D006591 1.1e-39 168.7 367 42.8
CDE06G0823 Ceratophyllum demersum HOM05D005355 ORTHO05D006591 1.6e-33 148.3 139 61.2
MBI15_g20157_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D010248 2.7e-33 147.5 269 42.0
arahy.Tifrunner.gnm1.ann1.V8LFJN Arachis hypogaea HOM05D005355 ORTHO05D006591 1.7e-32 144.8 316 39.2
Carub.0001s3530 Capsella rubella HOM05D005355 ORTHO05D006591 4.3e-31 140.2 119 61.3
Peaxi162Scf00914g00033 Petunia axillaris HOM05D005355 ORTHO05D006591 2.4e-29 134.4 270 42.2
CDE06G1231 Ceratophyllum demersum HOM05D005355 ORTHO05D006591 9.0e-29 132.5 258 39.9
MBI15_g19197_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 3.4e-28 130.6 98 70.4
Cpa.g.sc36.52 Carica papaya HOM05D005355 ORTHO05D006591 9.9e-28 129.0 205 44.9
AagrBONN_evm.TU.Sc2ySwM_362.1810 Anthoceros agrestis HOM05D005355 ORTHO05D006591 1.7e-27 128.3 480 29.0
Mapoly0004s0202 Marchantia polymorpha HOM05D005355 ORTHO05D006591 3.8e-27 127.1 444 29.7
SMO230G0121 Selaginella moellendorffii HOM05D005355 ORTHO05D006591 2.1e-25 121.3 446 32.3
Pp3c21_16190 Physcomitrium patens HOM05D005355 ORTHO05D006591 9.0e-21 105.9 454 28.6
SMO367G1068 Selaginella moellendorffii HOM05D005355 ORTHO05D006591 1.2e-20 105.5 429 31.7
HPP92_011157 Vanilla planifolia HOM05D005355 ORTHO05D006591 4.9e-19 100.1 430 28.6
Nitab4.5_0001273g0020 Nicotiana tabacum HOM05D005355 ORTHO05D006591 5.4e-18 96.7 333 30.6
CBR_g29492 Chara braunii HOM05D005355 ORTHO05D006591 7.1e-18 96.3 114 44.7
SMO230G0058 Selaginella moellendorffii HOM05D005355 ORTHO05D006591 6.0e-17 93.2 103 50.5
Nn8g40262 Nelumbo nucifera HOM05D005355 ORTHO05D006591 3.0e-16 90.9 84 61.9
DCAR_011615 Daucus carota HOM05D005355 ORTHO05D006591 1.9e-15 88.2 63 68.3
Nitab4.5_0001803g0110 Nicotiana tabacum HOM05D005355 ORTHO05D006591 2.4e-13 81.3 63 65.1
Nitab4.5_0001273g0010 Nicotiana tabacum HOM05D005355 ORTHO05D006591 4.5e-12 77.0 64 64.1
SGA_v2.0_scaffold340G49302 Striga asiatica HOM05D005355 ORTHO05D006591 1.3e-11 75.5 116 47.4
MBI15_g42534_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 4.6e-09 67.0 62 56.5
SEGI_25872 Sequoiadendron giganteum HOM05D005355 ORTHO05D006591 4.3e-07 60.5 374 30.2
SGA_v2.0_scaffold340G49301 Striga asiatica HOM05D005355 ORTHO05D006591 5.6e-07 60.1 67 55.2
arahy.Tifrunner.gnm1.ann1.F65TCR Arachis hypogaea HOM05D005355 ORTHO05D006591 2.8e-06 57.8 36 69.4

Acer truncatum (2 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (4 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (2 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (2 genes)
Carica papaya (2 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (3 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (2 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (6 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (4 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (2 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (3 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (0 genes)
Striga asiatica (3 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings