Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001017 Camellia sinensis var. sinensis HOM05D006766 ORTHO05D008534 3.0e-42 174.9 96 100.0
CSS0023455 Camellia sinensis var. sinensis HOM05D006766 ORTHO05D008534 3.7e-40 167.9 96 97.9
Actinidia27896 Actinidia chinensis HOM05D006766 ORTHO05D008534 6.0e-22 107.5 89 69.7
Lsat_1_v5_gn_5_118560 Lactuca sativa HOM05D006766 ORTHO05D008534 3.0e-21 105.1 94 63.8
Hma1.2p1_0066F.1_g036420 Hydrangea macrophylla HOM05D006766 ORTHO05D008534 1.6e-19 99.4 101 64.4
vmacro02108 Vaccinium macrocarpon HOM05D006766 ORTHO05D008534 1.6e-19 99.4 88 69.3
ECA234G2659 Erigeron canadensis HOM05D006766 ORTHO05D008534 4.7e-19 97.8 96 60.4
AT4G39300 Arabidopsis thaliana HOM05D006766 ORTHO05D008534 6.2e-19 97.4 95 62.1
TWI31G1395 Tripterygium wilfordii HOM05D006766 ORTHO05D008534 6.2e-19 97.4 96 63.5
CiPaw.05G064400 Carya illinoinensis HOM05D006766 ORTHO05D008534 1.1e-18 96.7 95 64.2
HanXRQChr10g0307051 Helianthus annuus HOM05D006766 ORTHO05D008534 1.1e-18 96.7 94 57.4
Rhsim11G0177000 Rhododendron simsii HOM05D006766 ORTHO05D008534 1.4e-18 96.3 83 71.1
RcHm_v2.0_Chr6g0264231 Rosa chinensis HOM05D006766 ORTHO05D008534 2.3e-18 95.5 97 61.9
Nn5g30294 Nelumbo nucifera HOM05D006766 ORTHO05D008534 3.1e-18 95.1 94 64.9
CARHR247400 Cardamine hirsuta HOM05D006766 ORTHO05D008534 4.0e-18 94.7 94 61.7
AL7G11290 Arabidopsis lyrata HOM05D006766 ORTHO05D008534 5.2e-18 94.4 93 62.4
THA.LOC104824828 Tarenaya hassleriana HOM05D006766 ORTHO05D008534 5.2e-18 94.4 95 62.1
Carub.0007s0121 Capsella rubella HOM05D006766 ORTHO05D008534 6.8e-18 94.0 93 62.4
QL12p018934 Quercus lobata HOM05D006766 ORTHO05D008534 8.9e-18 93.6 94 69.1
Manes.17G101000 Manihot esculenta HOM05D006766 ORTHO05D008534 2.0e-17 92.4 95 58.9
Sp7g36570 Schrenkiella parvula HOM05D006766 ORTHO05D008534 2.0e-17 92.4 94 60.6
GSVIVG01031965001 Vitis vinifera HOM05D006766 ORTHO05D008534 2.0e-17 92.4 94 62.8
Cc02_g17570 Coffea canephora HOM05D006766 ORTHO05D008534 2.6e-17 92.0 87 60.9
COL.COLO4_25930 Corchorus olitorius HOM05D006766 ORTHO05D008534 3.4e-17 91.7 93 64.5
Gohir.A03G194400 Gossypium hirsutum HOM05D006766 ORTHO05D008534 3.4e-17 91.7 99 59.6
Thecc.02G085300 Theobroma cacao HOM05D006766 ORTHO05D008534 4.4e-17 91.3 93 66.7
Ciclev10029674m.g Citrus clementina HOM05D006766 ORTHO05D008534 5.8e-17 90.9 97 60.8
Thhalv10026662m.g Eutrema salsugineum HOM05D006766 ORTHO05D008534 5.8e-17 90.9 95 58.9
FvH4_2g08780 Fragaria vesca HOM05D006766 ORTHO05D008534 7.6e-17 90.5 95 57.9
Potri.004G154800 Populus trichocarpa HOM05D006766 ORTHO05D008534 1.7e-16 89.4 95 58.9
PGR142G1230 Punica granatum HOM05D006766 ORTHO05D008534 1.7e-16 89.4 95 63.2
BcaNung03879 Brassica carinata HOM05D006766 ORTHO05D008534 2.9e-16 88.6 96 59.4
Actinidia08228 Actinidia chinensis HOM05D006766 ORTHO05D008534 3.7e-16 88.2 72 75.0
Cfa005004 Carpinus fangiana HOM05D006766 ORTHO05D008534 4.9e-16 87.8 89 65.2
BcaNung02343 Brassica carinata HOM05D006766 ORTHO05D008534 1.4e-15 86.3 94 55.3
FAN24G2015 Fragaria x ananassa HOM05D006766 ORTHO05D008534 1.4e-15 86.3 90 60.0
FAN27G0567 Fragaria x ananassa HOM05D006766 ORTHO05D008534 1.4e-15 86.3 90 60.0
Haze_02383 Corylus avellana HOM05D001555 ORTHO05D001616 1.9e-15 85.9 89 62.9
Cpa.g.sc62.150 Carica papaya HOM05D006766 ORTHO05D008534 2.4e-15 85.5 97 52.6
Hma1.2p1_0633F.1_g192560 Hydrangea macrophylla HOM05D006766 ORTHO05D008534 2.4e-15 85.5 88 65.9
FAN20G1934 Fragaria x ananassa HOM05D004333 ORTHO05D005363 3.2e-15 85.1 95 56.8
A06p48570 Brassica napus HOM05D006766 ORTHO05D008534 4.1e-15 84.7 89 57.3
Duzib248G0712 Durio zibethinus HOM05D006766 ORTHO05D008534 4.1e-15 84.7 88 65.9
FAN15G0619 Fragaria x ananassa HOM05D006766 ORTHO05D008534 4.1e-15 84.7 95 56.8
Prupe.8G097200 Prunus persica HOM05D006766 ORTHO05D008534 4.1e-15 84.7 94 59.6
Lj3g0004404 Lotus japonicus HOM05D006766 ORTHO05D008534 5.4e-15 84.3 95 55.8
Aa31LG7G14800 Aethionema arabicum HOM05D006766 ORTHO05D008534 7.1e-15 84.0 92 58.7
A01p00310 Brassica napus HOM05D006766 ORTHO05D008534 7.1e-15 84.0 95 57.9
Eucgr.I01270 Eucalyptus grandis HOM05D006766 ORTHO05D008534 7.1e-15 84.0 95 58.9
BraA01t00038Z Brassica rapa HOM05D006766 ORTHO05D008534 2.1e-14 82.4 91 59.3
TAR625G1191 Trochodendron aralioides HOM05D006766 ORTHO05D008534 2.7e-14 82.0 95 54.7
Sabra04G0102700 Salix brachista HOM05D006766 ORTHO05D008534 3.5e-14 81.6 93 55.9
Gohir.D02G215600 Gossypium hirsutum HOM05D006766 ORTHO05D008534 4.6e-14 81.3 96 59.4
Lsat_1_v5_gn_7_89221 Lactuca sativa HOM05D006766 ORTHO05D008534 4.6e-14 81.3 87 55.2
PSO675G5258 Papaver somniferum HOM05D006766 ORTHO05D008534 6.0e-14 80.9 95 54.7
C07p63250 Brassica napus HOM05D006766 ORTHO05D008534 1.0e-13 80.1 89 55.1
BolC7t46735H Brassica oleracea HOM05D006766 ORTHO05D008534 1.0e-13 80.1 89 55.1
EL10Ac9g21725 Beta vulgaris HOM05D006766 ORTHO05D008534 2.3e-13 79.0 92 57.6
TAR381G1290 Trochodendron aralioides HOM05D006766 ORTHO05D008534 2.3e-13 79.0 89 61.8
MD10G1076400 Malus domestica HOM05D006766 ORTHO05D008534 3.0e-13 78.6 93 54.8
Duzib052G0491 Durio zibethinus HOM05D006766 ORTHO05D008534 3.9e-13 78.2 87 62.1
Migut.B00236 Erythranthe guttata HOM05D006766 ORTHO05D008534 5.1e-13 77.8 96 49.0
Gohir.A12G028700 Gossypium hirsutum HOM05D006766 ORTHO05D008534 5.1e-13 77.8 91 57.1
Gohir.D12G028200 Gossypium hirsutum HOM05D006766 ORTHO05D008534 5.1e-13 77.8 91 57.1
Gorai.008G028800 Gossypium raimondii HOM05D006766 ORTHO05D008534 5.1e-13 77.8 91 57.1
BolC1t00048H Brassica oleracea HOM05D006766 ORTHO05D008534 6.6e-13 77.4 92 57.6
Lsat_1_v5_gn_9_70521 Lactuca sativa HOM05D006766 ORTHO05D008534 6.6e-13 77.4 88 52.3
Glyma.11G117900 Glycine max HOM05D006766 ORTHO05D008534 8.6e-13 77.0 93 53.8
C01p00430 Brassica napus HOM05D006766 ORTHO05D008534 1.9e-12 75.9 90 57.8
Aa31LG6G15960 Aethionema arabicum HOM05D006766 ORTHO05D008534 3.3e-12 75.1 93 55.9
MD10G1031700 Malus domestica HOM05D006766 ORTHO05D008534 5.6e-12 74.3 88 59.1
Sed0007595 Sechium edule HOM05D006766 ORTHO05D008534 7.3e-12 73.9 94 53.2
Ah.01g006260 Amaranthus hybridus HOM05D006766 ORTHO05D008534 9.6e-12 73.6 95 54.7
arahy.Tifrunner.gnm1.ann1.0D280N Arachis hypogaea HOM05D006766 ORTHO05D008534 9.6e-12 73.6 88 56.8
arahy.Tifrunner.gnm1.ann1.PI6USP Arachis hypogaea HOM05D006766 ORTHO05D008534 9.6e-12 73.6 88 56.8
Ca_20875_v3 Cicer arietinum L. HOM05D006766 ORTHO05D008534 1.2e-11 73.2 95 50.5
PSO541G0900 Papaver somniferum HOM05D006766 ORTHO05D008534 1.6e-11 72.8 93 51.6
Potri.009G115900 Populus trichocarpa HOM05D006766 ORTHO05D008534 1.6e-11 72.8 89 53.9
ClCG02G005020 Citrullus lanatus HOM05D006766 ORTHO05D008534 2.1e-11 72.4 90 57.8
Lalb_Chr01g0002551 Lupinus albus HOM05D006766 ORTHO05D008534 2.1e-11 72.4 96 47.9
PSO144G0109 Papaver somniferum HOM05D006766 ORTHO05D008534 2.8e-11 72.0 93 51.6
PSO144G0117 Papaver somniferum HOM05D006766 ORTHO05D008534 2.8e-11 72.0 93 51.6
Psat7g184720 Pisum sativum HOM05D006766 ORTHO05D008534 2.8e-11 72.0 95 50.5
Nn1g04840 Nelumbo nucifera HOM05D006766 ORTHO05D008534 4.7e-11 71.2 90 56.7
Ah.01g019400 Amaranthus hybridus HOM05D001555 ORTHO05D001616 8.1e-11 70.5 92 52.2
Sc18g0004470 Simmondsia chinensis HOM05D006766 ORTHO05D008534 8.1e-11 70.5 94 53.2
CsaV3_7G023550 Cucumis sativus L. HOM05D006766 ORTHO05D008534 1.4e-10 69.7 82 57.3
Dinv42065 Davidia involucrata HOM05D006766 ORTHO05D008534 1.8e-10 69.3 92 46.7
PSO675G5014 Papaver somniferum HOM05D006766 ORTHO05D008534 3.1e-10 68.6 88 52.3
Sed0021705 Sechium edule HOM05D006766 ORTHO05D008534 3.1e-10 68.6 93 53.8
Aqoxy5G01642 Aquilegia oxysepala HOM05D006766 ORTHO05D008534 4.0e-10 68.2 93 50.5
Glyma.12G043301 Glycine max HOM05D006766 ORTHO05D008534 4.0e-10 68.2 85 55.3
Lalb_Chr03g0025701 Lupinus albus HOM05D006766 ORTHO05D008534 4.0e-10 68.2 89 49.4
AUR62011324 Chenopodium quinoa HOM05D006766 ORTHO05D008534 6.8e-10 67.4 94 54.3
DCAR_003674 Daucus carota HOM05D006766 ORTHO05D008534 6.8e-10 67.4 94 48.9
VMungo1127G0063 Vigna mungo HOM05D006766 ORTHO05D008534 8.9e-10 67.0 85 56.5
Atru.chr5.3014 Acer truncatum HOM05D006766 ORTHO05D008534 1.2e-09 66.6 82 59.8
AUR62016736 Chenopodium quinoa HOM05D006766 ORTHO05D008534 2.0e-09 65.9 89 55.1
Gorai.005G243600 Gossypium raimondii HOM05D006766 ORTHO05D008534 2.0e-09 65.9 93 50.5
Lj5g0021871 Lotus japonicus HOM05D006766 ORTHO05D008534 2.6e-09 65.5 88 51.1
RcHm_v2.0_Chr5g0010131 Rosa chinensis HOM05D006766 ORTHO05D008534 3.4e-09 65.1 90 52.2
MELO3C012523.2 Cucumis melo HOM05D006766 ORTHO05D008534 7.6e-09 63.9 83 51.8
Phvul.011G045300 Phaseolus vulgaris HOM05D006766 ORTHO05D008534 7.6e-09 63.9 88 53.4
RcHm_v2.0_Chr1g0349571 Rosa chinensis HOM05D006766 ORTHO05D008534 2.2e-08 62.4 43 74.4
Hund06233 Selenicereus undatus HOM05D006766 ORTHO05D008534 2.2e-08 62.4 87 49.4
TPR.G19399 Trifolium pratense HOM05D006766 ORTHO05D008534 2.2e-08 62.4 88 46.6
CDE04G2003 Ceratophyllum demersum HOM05D006766 ORTHO05D008534 2.9e-08 62.0 93 47.3
SalBow6G1480 Salvia bowleyana HOM05D006766 ORTHO05D008534 6.4e-08 60.8 87 47.1
Sabra09G0089100 Salix brachista HOM05D006766 ORTHO05D008534 1.1e-07 60.1 43 72.1
Medtr4g070030 Medicago truncatula HOM05D006766 ORTHO05D008534 3.2e-07 58.5 88 44.3
BcaNung01271 Brassica carinata HOM05D006766 ORTHO05D008534 2.1e-06 55.8 79 53.2
QL05p011176 Quercus lobata HOM05D006766 ORTHO05D008534 2.7e-06 55.5 31 80.6
SalBow6G2329 Salvia bowleyana HOM05D006766 ORTHO05D008534 7.8e-06 53.9 41 58.5

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (2 genes)
Amaranthus hybridus (2 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (3 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (0 genes)
Capsella rubella (1 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (3 genes)
Lonicera japonica (0 genes)
Lotus japonicus (2 genes)
Lupinus albus (2 genes)
Magnolia biondii (0 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (0 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (5 genes)
Petunia axillaris (0 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (3 genes)
Salix brachista (2 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (0 genes)
Solanum pennellii (0 genes)
Solanum tuberosum (0 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (0 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (0 genes)

Program Settings