Gene: vmacro08384

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro08384
  • Transcript Identifier vmacro08384-RA
  • Gene Type Coding gene
  • Location chr6_Vaccinium_macrocarpon_Stevens_v1 : 32423741-32432791 : positive

Gene Family Information

  • ID HOM05D000234
  • #Genes/#Species 1784/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro08384_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to AGO10: Protein argonaute 10 (Arabidopsis thaliana OX=3702)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1902183
ISO
PLAZA Integrative Orthologyregulation of shoot apical meristem development AT5G43810
GO:0035019
ISO
PLAZA Integrative Orthologysomatic stem cell population maintenance AT5G43810
GO:0031047
ISO
PLAZA Integrative Orthologygene silencing by RNA Solyc09g082830.4
GO:0051607
ISO
PLAZA Integrative Orthologydefense response to virus AT5G43810
GO:0009934
ISO
PLAZA Integrative Orthologyregulation of meristem structural organization AT5G43810
GO:0010586
ISO
PLAZA Integrative OrthologymiRNA metabolic process AT5G43810

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0035198
ISO
PLAZA Integrative OrthologymiRNA binding AT5G43810

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G43810

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003100 PAZ domain
IPR003165 Piwi domain
IPR012337 Ribonuclease H-like superfamily
IPR036085 PAZ domain superfamily
IPR014811 Argonaute, linker 1 domain
IPR032473 Protein argonaute, Mid domain
IPR036397 Ribonuclease H superfamily
IPR032474 Protein argonaute, N-terminal
IPR032472 Argonaute linker 2 domain
Mapman id Description
16.9.2.7 RNA processing.mRNA silencing.miRNA pathway.miRNA recruiting factor (AGO1/AGO10)