Gene: AT5G43810

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G43810
  • Transcript Identifier AT5G43810.1
  • Gene Type Coding gene
  • Location Chr5 : 17611939-17616562 : positive

Gene Family Information

  • ID HOM05D000234
  • #Genes/#Species 1784/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G43810.1
  • symbol AGO10
  • Alias PNH,PINHEAD,ZLL,ZWILLE
  • full_name ARGONAUTE 10
  • uniprot Q9XGW1

Descriptions

  • Description Stabilizer of iron transporter SufD / Polynucleotidyl transferase
  • Computational description ZWILLE (ZLL); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT1G48410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048366
ISO
PLAZA Integrative Orthologyleaf development Os06g0597400
GO:0019827
ISO
PLAZA Integrative Orthologystem cell population maintenance Os06g0597400
GO:0031047
IEA
GOA Databasegene silencing by RNA
GO:0006417
IEA
GOA Databaseregulation of translation
GO:0009934
IMP
Gene Ontologyregulation of meristem structural organization1
GO:0051607
IDA
Gene Ontologydefense response to virus2
GO:1902183
IMP
Gene Ontologyregulation of shoot apical meristem development3
GO:0010586
IMP
Gene OntologymiRNA metabolic process4
GO:0035019
IMP
Gene Ontologysomatic stem cell population maintenance5

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
IPI
Gene Ontologyprotein binding1
GO:0005515
IEA
InterProprotein binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003743
ISS
Gene Ontologytranslation initiation factor activity
GO:0035198
IDA
Gene OntologymiRNA binding3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IDA
ISS, ISM
Gene Ontologycytoplasm6 7
GO:0009536
HDA
Gene Ontologyplastid8

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003100 PAZ domain
IPR032474 Protein argonaute, N-terminal
IPR012337 Ribonuclease H-like superfamily
IPR003165 Piwi domain
IPR014811 Argonaute, linker 1 domain
IPR036397 Ribonuclease H superfamily
IPR032472 Argonaute linker 2 domain
IPR036085 PAZ domain superfamily
IPR032473 Protein argonaute, Mid domain
Mapman id Description
16.9.2.7 RNA processing.mRNA silencing.miRNA pathway.miRNA recruiting factor (AGO1/AGO10)