Gene: Sopen11g006930

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g006930
  • Transcript Identifier Sopen11g006930.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 5114805-5132036 : negative

Gene Family Information

  • ID HOM05D001780
  • #Genes/#Species 367/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g006930.1

Descriptions

  • Description tRNA synthetase class I (I, L, M and V) family protein | FUNCTIONS IN: isoleucine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, zinc ion binding, ATP binding | INVOLVED IN: response to cadmium ion, tRNA aminoacylation for protein translation | LOCATED IN: cytosol | EXPRESSED IN: male gametophyte, guard cell, epidermis, cultured cell, pollen tube | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage | CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site , Isoleucyl-tRNA synthetase , Isoleucyl-tRNA synthetase, class Ia , Aminoacyl-tRNA synthetase, class 1a, anticodon-binding , Rossmann-like alpha/beta/alpha sandwich fold , Isoleucyl-tRNA synthetase, class Ia, N-terminal , Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding , Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing , Aminoacyl-tRNA synthetase, class Ia | BEST Arabidopsis thaliana protein match is: tRNA synthetase class I (I, L, M and V) family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation
GO:0006428
IEA
InterProisoleucyl-tRNA aminoacylation
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT4G10320

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0004822
IEA
InterProisoleucine-tRNA ligase activity
GO:0000166
IEA
InterPronucleotide binding
GO:0005524
IEA
InterProATP binding
GO:0000049
IEA
InterProtRNA binding
GO:0002161
IEA
InterProaminoacyl-tRNA editing activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G10320

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
IPR023586 Isoleucine-tRNA ligase, type 2
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold
IPR002301 Isoleucine-tRNA ligase
IPR033709 Isoleucyl tRNA synthetase type 2, anticodon-binding domain
IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain
IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
IPR002300 Aminoacyl-tRNA synthetase, class Ia
Mapman id Description
17.2.11 Protein biosynthesis.aminoacyl-tRNA synthetase activities.isoleucine-tRNA ligase