Gene: Sopen08g015280

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen08g015280
  • Transcript Identifier Sopen08g015280.2
  • Gene Type Coding gene
  • Location Spenn-ch08 : 46346705-46373354 : positive

Gene Family Information

  • ID HOM05D000004
  • #Genes/#Species 19584/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen08g015280.2

Descriptions

  • Description Aldolase-type TIM barrel family protein | FUNCTIONS IN: glycolate oxidase activity, oxidoreductase activity, FMN binding, catalytic activity | INVOLVED IN: oxidation reduction, metabolic process | LOCATED IN: peroxisome | EXPRESSED IN: 12 plant structures | EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage | CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel , FMN-dependent alpha-hydroxy acid dehydrogenase, active site , FMN-dependent dehydrogenase , Alpha-hydroxy acid dehydrogenase, FMN-dependent | BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0008270
IEA
InterProzinc ion binding
GO:0016491
IEA
InterProoxidoreductase activity
GO:0003824
IEA
InterProcatalytic activity
GO:0010181
IEA
InterProFMN binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000477 Reverse transcriptase domain
IPR036875 Zinc finger, CCHC-type superfamily
IPR036397 Ribonuclease H superfamily
IPR012337 Ribonuclease H-like superfamily
IPR041373 Reverse transcriptase, RNase H-like domain
IPR005162 Retrotransposon gag domain
IPR000262 FMN-dependent dehydrogenase
IPR021109 Aspartic peptidase domain superfamily
IPR043128 Reverse transcriptase/Diguanylate cyclase domain
IPR001878 Zinc finger, CCHC-type
IPR013785 Aldolase-type TIM barrel
IPR041588 Integrase zinc-binding domain
IPR043502 DNA/RNA polymerase superfamily
IPR016197 Chromo-like domain superfamily
IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent
Mapman id Description
1.3.2 Photosynthesis.photorespiration.glycolate oxidase