Gene: Sopen07g012430

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g012430
  • Transcript Identifier Sopen07g012430.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 29726412-29742519 : negative

Gene Family Information

  • ID HOM05D000004
  • #Genes/#Species 19584/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g012430.1

Descriptions

  • Description Apocytochrome f precursor - Atropa belladonna (Belladonna) (Deadly nightshade), Encodes cytochrome f apoprotein | involved in photosynthetic electron transport chain | encoded by the chloroplast genome and is transcriptionally repressed by a nuclear gene HCF2. | photosynthetic electron transfer A (PETA) | FUNCTIONS IN: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity | INVOLVED IN: photosynthetic electron transport in cytochrome b6/f | LOCATED IN: thylakoid, chloroplast thylakoid membrane, cytochrome b6f complex, chloroplast, membrane | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Cytochrome f , Rudiment single hybrid motif ., Cytochrome f
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015979
IEA
InterProphotosynthesis
GO:0009767
ISO
PLAZA Integrative Orthologyphotosynthetic electron transport chain ATCG00540

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005506
IEA
InterProiron ion binding
GO:0009055
IEA
InterProelectron transfer activity
GO:0020037
IEA
InterProheme binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding ATCG00540
GO:0045158
ISO
PLAZA Integrative Orthologyelectron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity ATCG00540

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009522
IEA
InterProphotosystem I
GO:0009579
IEA
InterProthylakoid
GO:0016021
IEA
InterProintegral component of membrane
GO:0031361
IEA
InterProintegral component of thylakoid membrane
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast ATCG00540
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid ATCG00540
GO:0009512
ISO
PLAZA Integrative Orthologycytochrome b6f complex ATCG00540
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane ATCG00540

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR043128 Reverse transcriptase/Diguanylate cyclase domain
IPR036397 Ribonuclease H superfamily
IPR041588 Integrase zinc-binding domain
IPR005162 Retrotransposon gag domain
IPR024094 Cytochrome f large domain
IPR000477 Reverse transcriptase domain
IPR021109 Aspartic peptidase domain superfamily
IPR036826 Cytochrome f large domain superfamily
IPR003359 Photosystem I Ycf4, assembly
IPR002325 Cytochrome f
IPR024058 Cytochrome f transmembrane anchor
IPR043502 DNA/RNA polymerase superfamily
IPR011054 Rudiment single hybrid motif
IPR012337 Ribonuclease H-like superfamily
Mapman id Description
1.1.2.1 Photosynthesis.photophosphorylation.cytochrome b6/f complex.apocytochrome f component PetA