Gene: ATCG00540

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier ATCG00540
  • Transcript Identifier ATCG00540.1
  • Gene Type Coding gene
  • Location ChrC : 61657-62619 : positive

Gene Family Information

  • ID HOM05D000806
  • #Genes/#Species 732/82
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid ATCG00540.1
  • symbol PETA
  • uniprot P56771

Descriptions

  • Description photosynthetic electron transfer A
  • Computational description photosynthetic electron transfer A (PETA); FUNCTIONS IN: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity; INVOLVED IN: photosynthetic electron transport in cytochrome b6/f; LOCATED IN: thylakoid, chloroplast thylakoid membrane, cytochrome b6f complex, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome f (InterPro:IPR002325), Rudiment single hybrid motif (InterPro:IPR011054).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015979
IEA
GOA Databasephotosynthesis
GO:0015979
IEA
InterProphotosynthesis
GO:0009767
TAS
Gene Ontologyphotosynthetic electron transport chain1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0020037
IEA
Gene Ontologyheme binding
GO:0020037
IEA
InterProheme binding
GO:0009055
IEA
GOA Databaseelectron transfer activity
GO:0009055
IEA
InterProelectron transfer activity
GO:0005506
IEA
Gene Ontologyiron ion binding
GO:0005506
IEA
InterProiron ion binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003729
IDA
Gene OntologymRNA binding2
GO:0045158
TAS
Gene Ontologyelectron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031361
IEA
Gene Ontologyintegral component of thylakoid membrane
GO:0031361
IEA
InterProintegral component of thylakoid membrane
GO:0009579
IDA
IEA
GOA Databasethylakoid
GO:0009579
HDA
Gene Ontologythylakoid3
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
ISM, IBA
Gene Ontologychloroplast4 5
GO:0009536
IEA
GOA Databaseplastid
GO:0009536
HDA
Gene Ontologyplastid6
GO:0009534
IDA
GOA Databasechloroplast thylakoid
GO:0009534
HDA
Gene Ontologychloroplast thylakoid7
GO:0009535
IDA
IEA
GOA Databasechloroplast thylakoid membrane
GO:0009535
HDA
Gene Ontologychloroplast thylakoid membrane8
GO:0009512
TAS
Gene Ontologycytochrome b6f complex1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR024094 Cytochrome f large domain
IPR002325 Cytochrome f
IPR036826 Cytochrome f large domain superfamily
IPR024058 Cytochrome f transmembrane anchor
IPR011054 Rudiment single hybrid motif
Mapman id Description
1.1.2.1 Photosynthesis.photophosphorylation.cytochrome b6/f complex.apocytochrome f component PetA