Gene: Pp3s34_420
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3s34_420
- Transcript Identifier Pp3s34_420V3.1
- Gene Type Coding gene
- Location scaffold_34 : 101782-132454 : negative
Gene Family Information
- ID HOM05D000198
- #Genes/#Species 1975/100
- Phylogenetic origin
- ID ORTHO05D309562
- #Genes/#Species 1 / 1(orphan gene)
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- name Pp3s34_420V3.1
- pacid 32948331
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006044 | IEA | InterPro | N-acetylglucosamine metabolic process | |
| GO:0015846 | IEA | InterPro | polyamine transport | |
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process | |
| GO:1901135 | IEA | InterPro | carbohydrate derivative metabolic process | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0042450 | IEA | InterPro | arginine biosynthetic process via ornithine | |
| GO:0055085 | IEA | InterPro | transmembrane transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0020037 | IEA | InterPro | heme binding | |
| GO:0008080 | IEA | InterPro | N-acetyltransferase activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0015594 | IEA | InterPro | ABC-type putrescine transporter activity | |
| GO:0015417 | IEA | InterPro | ABC-type polyamine transporter activity | |
| GO:0097367 | IEA | InterPro | carbohydrate derivative binding | |
| GO:0030246 | IEA | InterPro | carbohydrate binding | |
| GO:0004342 | IEA | InterPro | glucosamine-6-phosphate deaminase activity | |
| GO:0016829 | IEA | InterPro | lyase activity | |
| GO:0016620 | IEA | InterPro | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0004056 | IEA | InterPro | argininosuccinate lyase activity | |
| GO:0016491 | IEA | InterPro | oxidoreductase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | InterPro | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR013784 | Carbohydrate-binding-like fold |
| IPR018905 | Alpha-galactosidase, NEW3 domain |
| IPR016181 | Acyl-CoA N-acyltransferase |
| IPR011008 | Dimeric alpha-beta barrel |
| IPR000515 | ABC transporter type 1, transmembrane domain MetI-like |
| IPR010343 | Aromatic acid exporter family member 1 |
| IPR008969 | Carboxypeptidase-like, regulatory domain superfamily |
| IPR016162 | Aldehyde dehydrogenase, N-terminal |
| IPR035906 | MetI-like superfamily |
| IPR002731 | ATPase, BadF/BadG/BcrA/BcrD type |
| IPR003737 | N-acetylglucosaminyl phosphatidylinositol deacetylase-related |
| IPR043129 | ATPase, nucleotide binding domain |
| IPR009049 | Argininosuccinate lyase |
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| IPR008995 | Molybdate/tungstate binding, C-terminal |
| IPR029068 | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
| IPR036188 | FAD/NAD(P)-binding domain superfamily |
| IPR000281 | Helix-turn-helix protein RpiR |
| IPR024078 | Putative deacetylase LmbE-like domain superfamily |
| IPR004360 | Glyoxalase/fosfomycin resistance/dioxygenase domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR037171 | NagB/RpiA transferase-like |
| IPR016163 | Aldehyde dehydrogenase, C-terminal |
| IPR002220 | DapA-like |
| IPR004547 | Glucosamine-6-phosphate isomerase |
| IPR001347 | SIS domain |
| IPR001434 | Domain of unknown function DUF11 |
| IPR038323 | Putative aromatic acid exporter, C-terminal domain superfamily |
| IPR008794 | Proline racemase family |
| IPR006148 | Glucosamine/galactosamine-6-phosphate isomerase |
| IPR029062 | Class I glutamine amidotransferase-like |
| IPR022761 | Fumarate lyase, N-terminal |
| IPR017879 | PotA, ATP-binding domain |
| IPR029419 | Argininosuccinate lyase, C-terminal |
| IPR013785 | Aldolase-type TIM barrel |
| IPR000600 | ROK family |
| IPR000362 | Fumarate lyase family |
| IPR003439 | ABC transporter-like, ATP-binding domain |
| IPR008948 | L-Aspartase-like |
| IPR009057 | Homeobox-like domain superfamily |
| IPR000182 | GNAT domain |
| IPR003593 | AAA+ ATPase domain |
| IPR015590 | Aldehyde dehydrogenase domain |
| IPR021062 | Putative aromatic acid exporter, C-terminal |
| IPR024083 | Fumarase/histidase, N-terminal |
| IPR036390 | Winged helix DNA-binding domain superfamily |
| IPR035472 | RpiR-like, SIS domain |
| IPR010644 | Heme-dependent peroxidase ChdC/CLD |
| IPR006076 | FAD dependent oxidoreductase |
| IPR016161 | Aldehyde/histidinol dehydrogenase |
| Mapman id | Description |
|---|---|
| 3.13.9.2.1 | Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-N-acetylglucosamine biosynthesis.salvage biosynthesis.N-acetylglucosamine kinase |
| 4.1.2.2.3.1 | Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.lysine.hydroxy-tetrahydrodihydrodipicolinate synthase |