Gene: Pp3c20_21870
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c20_21870
- Transcript Identifier Pp3c20_21870V3.1
- Gene Type Coding gene
- Location Chr20 : 14294636-14297695 : positive
Gene Family Information
- ID HOM05D002170
- #Genes/#Species 309/100
- Phylogenetic origin
- ID ORTHO05D007478
- #Genes/#Species 130/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- name Pp3c20_21870V3.1
- pacid 32946185
- alias Phypa_73095
- alias Pp1s40_57V6
- alias Phpat.020G078700
- uniprot A0A2K1IW28
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043562 | ISO | PLAZA Integrative Orthology | cellular response to nitrogen levels | AT3G17810 |
| GO:0006212 | IBA IEA | GOA Database | uracil catabolic process | |
| GO:0006212 | IEA | InterPro | uracil catabolic process | |
| GO:0006210 | IBA IEA | GOA Database | thymine catabolic process | |
| GO:0006210 | IEA | InterPro | thymine catabolic process | |
| GO:0019483 | IEA | GOA Database | beta-alanine biosynthetic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016627 | IEA | GOA Database | oxidoreductase activity, acting on the CH-CH group of donors | |
| GO:0016627 | IEA | InterPro | oxidoreductase activity, acting on the CH-CH group of donors | |
| GO:0017113 | IBA IEA | GOA Database | dihydropyrimidine dehydrogenase (NADP+) activity | |
| GO:0017113 | IEA | InterPro | dihydropyrimidine dehydrogenase (NADP+) activity | |
| GO:0002058 | IBA | GOA Database | uracil binding | |
| GO:0050661 | IBA | GOA Database | NADP binding | |
| GO:0051536 | IBA | GOA Database | iron-sulfur cluster binding | |
| GO:0003824 | IEA | GOA Database | catalytic activity | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0016491 | IEA | GOA Database | oxidoreductase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009536 | ISO | PLAZA Integrative Orthology | plastid | AT3G17810 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G17810 |
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT3G17810 |
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005737 | IEA | InterPro | cytoplasm |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 6.2.4.3 | Nucleotide metabolism.pyrimidines.catabolism.dihydropyrimidine dehydrogenase (PYD1) |