Gene: Pp3c20_21860
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c20_21860
- Transcript Identifier Pp3c20_21860V3.3
- Gene Type Coding gene
- Location Chr20 : 14285851-14291243 : negative
Gene Family Information
- ID HOM05D001811
- #Genes/#Species 361/100
- Phylogenetic origin
- ID ORTHO05D001738
- #Genes/#Species 362/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c20_21860V3.3
- pacid 32946995
- alias Phypa_180155
- alias Phpat.020G078600
- alias Pp1s40_59V6
- uniprot A0A2K1IW26
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0072659 | ISO | PLAZA Integrative Orthology | protein localization to plasma membrane | AT5G11710 |
| GO:0006897 | IBA | GOA Database | endocytosis | |
| GO:0006623 | IEA | GOA Database | protein targeting to vacuole | |
| GO:0006623 | IEA | InterPro | protein targeting to vacuole |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030276 | IBA IEA | GOA Database | clathrin binding | |
| GO:0030276 | IEA | InterPro | clathrin binding | |
| GO:0002020 | ISO | PLAZA Integrative Orthology | protease binding | AT5G11710 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G43160 |
| GO:0005543 | IBA | GOA Database | phospholipid binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009579 | ISO | PLAZA Integrative Orthology | thylakoid | AT5G11710 |
| GO:0009504 | ISO | PLAZA Integrative Orthology | cell plate | AT3G59290 |
| GO:0005884 | ISO | PLAZA Integrative Orthology | actin filament | AT5G11710 |
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT2G43160 |
| GO:0005802 | ISO | PLAZA Integrative Orthology | trans-Golgi network | AT5G11710 |
| GO:0005768 | IBA | GOA Database | endosome | |
| GO:0005886 | IBA | GOA Database | plasma membrane | |
| GO:0030125 | IBA | GOA Database | clathrin vesicle coat | |
| GO:0031410 | IEA | GOA Database | cytoplasmic vesicle | |
| GO:0005794 | IEA | GOA Database | Golgi apparatus | |
| GO:0030136 | IEA | GOA Database | clathrin-coated vesicle |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |