Gene: AT3G17810

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G17810
  • Transcript Identifier AT3G17810.1
  • Gene Type Coding gene
  • Location Chr3 : 6094279-6096289 : positive

Gene Family Information

  • ID HOM05D002170
  • #Genes/#Species 309/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G17810.1
  • symbol PYD1
  • uniprot Q9LVI9

Descriptions

  • Description pyrimidine 1
  • Computational description pyrimidine 1 (PYD1); FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, dihydropyrimidine dehydrogenase (NADP ) activity; INVOLVED IN: 'de novo' pyrimidine base biosynthetic process, uracil catabolic process, cellular response to nitrogen levels; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Dihydroorotate dehydrogenase, class 1/ 2 (InterPro:IPR012135), Dihydroorotate dehydrogenase, class 1, core (InterPro:IPR005720); Has 5953 Blast hits to 5953 proteins in 1914 species: Archae - 176; Bacteria - 4342; Metazoa - 263; Fungi - 99; Plants - 89; Viruses - 0; Other Eukaryotes - 984 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006212
IEA
GOA Databaseuracil catabolic process
GO:0006212
IMP
IBA
Gene Ontologyuracil catabolic process1 2
GO:0006212
IEA
InterProuracil catabolic process
GO:0006210
IEA
GOA Databasethymine catabolic process
GO:0006210
IBA
Gene Ontologythymine catabolic process2
GO:0006210
IEA
InterProthymine catabolic process
GO:0043562
IEP
Gene Ontologycellular response to nitrogen levels1
GO:0019483
IEA
Gene Ontologybeta-alanine biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0016627
IEA
GOA Databaseoxidoreductase activity, acting on the CH-CH group of donors
GO:0016627
IEA
InterProoxidoreductase activity, acting on the CH-CH group of donors
GO:0017113
IEA
GOA Databasedihydropyrimidine dehydrogenase (NADP+) activity
GO:0017113
IMP
IBA
Gene Ontologydihydropyrimidine dehydrogenase (NADP+) activity1 2
GO:0017113
IEA
InterProdihydropyrimidine dehydrogenase (NADP+) activity
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0051536
IBA
Gene Ontologyiron-sulfur cluster binding2
GO:0050661
IBA
Gene OntologyNADP binding2
GO:0002058
IBA
Gene Ontologyuracil binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
Gene Ontologychloroplast3
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IEA
InterProcytoplasm
GO:0009536
IEA
GOA Databaseplastid
GO:0009536
IDA
Gene Ontologyplastid1
GO:0009570
IDA
GOA Databasechloroplast stroma
GO:0009570
HDA
Gene Ontologychloroplast stroma4
GO:0005886
ISM
Gene Ontologyplasma membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044512 Dihydropyrimidine dehydrogenase
IPR005720 Dihydroorotate dehydrogenase domain
IPR013785 Aldolase-type TIM barrel
Mapman id Description
6.2.4.3 Nucleotide metabolism.pyrimidines.catabolism.dihydropyrimidine dehydrogenase (PYD1)