Gene: Potri.013G088600
General Information
Structural Information
- Species Populus trichocarpa
- Gene Identifier Potri.013G088600
- Transcript Identifier Potri.013G088600.3
- Gene Type Coding gene
- Location Chr13 : 8827423-8845120 : positive
Gene Family Information
- ID HOM05D002636
- #Genes/#Species 260/99
- Phylogenetic origin
- ID ORTHO05D003490
- #Genes/#Species 221/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Potri.013G088600.v4.1
- pacid 42811819
- synonym POPTR_0013s09690
Descriptions
- Description K14290 - exportin-1 (XPO1, CRM1)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006886 | IEA | InterPro | intracellular protein transport | |
| GO:0006611 | IEA | InterPro | protein export from nucleus | |
| GO:0009408 | ISO | PLAZA Integrative Orthology | response to heat | AT5G17020 |
| GO:0009860 | ISO | PLAZA Integrative Orthology | pollen tube growth | AT5G17020 |
| GO:0009555 | ISO | PLAZA Integrative Orthology | pollen development | AT5G17020 |
| GO:0009553 | ISO | PLAZA Integrative Orthology | embryo sac development | AT5G17020 |
| GO:0009846 | ISO | PLAZA Integrative Orthology | pollen germination | AT5G17020 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031267 | IEA | InterPro | small GTPase binding | |
| GO:0005049 | IEA | InterPro | nuclear export signal receptor activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G17020 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G17020 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT3G03110 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G17020 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR041123 | Chromosome region maintenance repeat |
| IPR013598 | Exportin-1/Importin-beta-like |
| IPR016024 | Armadillo-type fold |
| IPR001494 | Importin-beta, N-terminal domain |
| IPR014877 | Exportin-1, C-terminal |
| IPR045065 | Exportin-1/5 |
| IPR040485 | Exportin-1, repeat 3 |
| IPR011989 | Armadillo-like helical |
| IPR041235 | Exportin-1, repeat 2 |
| Mapman id | Description |
|---|---|
| 23.5.1.2.9 | Protein translocation.nucleus.nucleocytoplasmic transport.cargo receptor activities.export karyopherin (XPO1) |