Gene: AT5G17020

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G17020
  • Transcript Identifier AT5G17020.1
  • Gene Type Coding gene
  • Location Chr5 : 5594904-5602467 : positive

Gene Family Information

  • ID HOM05D002636
  • #Genes/#Species 260/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G17020.1
  • symbol XPO1A
  • Alias ATCRM1,ATXPO1,ARABIDOPSIS THALIANA EXPORTIN 1,HIT2,HEAT-INTOLERANT 2,XPO1,EXPORTIN 1
  • uniprot Q9SMV6

Descriptions

  • Description exportin 1A
  • Computational description exportin 1A (XPO1A); CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Exportin 1, C-terminal (InterPro:IPR014877), Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: exportin 1B (TAIR:AT3G03110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
IEA
GOA Databaseintracellular protein transport
GO:0006886
IEA
InterProintracellular protein transport
GO:0006611
IEA
GOA Databaseprotein export from nucleus
GO:0006611
ISS
Gene Ontologyprotein export from nucleus1
GO:0006611
IEA
InterProprotein export from nucleus
GO:0015031
IEA
GOA Databaseprotein transport
GO:0051028
IEA
GOA DatabasemRNA transport
GO:0000055
IBA
Gene Ontologyribosomal large subunit export from nucleus2
GO:0000056
IBA
Gene Ontologyribosomal small subunit export from nucleus2
GO:0009408
IMP
Gene Ontologyresponse to heat3
GO:0009860
IGI
Gene Ontologypollen tube growth4
GO:0009846
IGI
Gene Ontologypollen germination4
GO:0009555
IGI
Gene Ontologypollen development4
GO:0009553
IGI
Gene Ontologyembryo sac development4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031267
IEA
Gene Ontologysmall GTPase binding
GO:0031267
IEA
InterProsmall GTPase binding
GO:0005049
IEA
GOA Databasenuclear export signal receptor activity
GO:0005049
IBA
Gene Ontologynuclear export signal receptor activity2
GO:0005049
IEA
InterPronuclear export signal receptor activity
GO:0005515
IPI
Gene Ontologyprotein binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005643
IEA
GOA Databasenuclear pore
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IBA
TAS
Gene Ontologynucleus1 2
GO:0016020
IEA
GOA Databasemembrane
GO:0005829
IDA
GOA Databasecytosol
GO:0031965
IEA
GOA Databasenuclear membrane
GO:0005737
IBA
Gene Ontologycytoplasm2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011989 Armadillo-like helical
IPR045065 Exportin-1/5
IPR016024 Armadillo-type fold
IPR001494 Importin-beta, N-terminal domain
IPR014877 Exportin-1, C-terminal
IPR041235 Exportin-1, repeat 2
IPR040485 Exportin-1, repeat 3
IPR013598 Exportin-1/Importin-beta-like
IPR041123 Chromosome region maintenance repeat
Mapman id Description
23.5.1.2.9 Protein translocation.nucleus.nucleocytoplasmic transport.cargo receptor activities.export karyopherin (XPO1)