Gene: PGR142G1753
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR142G1753
- Transcript Identifier PGR142G1753.01
- Gene Type Coding gene
- Location NC_045128.1 : 19680528-19694210 : negative
Gene Family Information
- ID HOM05D070266
- #Genes/#Species 1 / 1(orphan gene)
- Phylogenetic origin
- ID ORTHO05D471200
- #Genes/#Species 1 / 1(orphan gene)
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pid XP_031378353.1
- name LOC116193746
- name XM_031522493.1
- id gene-LOC116193746
- uniprot A0A6P8CB75
Descriptions
- product uncharacterized LOC116193746
- Description The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 2 codons
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015074 | IEA | GOA Database | DNA integration | |
| GO:0015074 | IEA | InterPro | DNA integration |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR041373 | Reverse transcriptase, RNase H-like domain |
| IPR043128 | Reverse transcriptase/Diguanylate cyclase domain |
| IPR012337 | Ribonuclease H-like superfamily |
| IPR001584 | Integrase, catalytic core |
| IPR041588 | Integrase zinc-binding domain |
| IPR043502 | DNA/RNA polymerase superfamily |
| IPR036397 | Ribonuclease H superfamily |
| IPR000477 | Reverse transcriptase domain |
| IPR041577 | Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |