Gene: Nitab4.5_0009949g0010
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0009949g0010
- Transcript Identifier Nitab4.5_0009949g0010.1
- Gene Type Coding gene
- Location Nitab4.5_0009949 : 38165-48642 : negative
Gene Family Information
- ID HOM05D000877
- #Genes/#Species 679/99
- Phylogenetic origin
- ID ORTHO05D001509
- #Genes/#Species 395/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Nitab4.5_0009949g0010.1
- SR1-identifier Nta11g03050.1
Descriptions
- Description Glycosyl hydrolase family 38, C-terminal, Glycoside hydrolase/deacetylase, beta/alpha-barrel, Glycosyl hydrolase, family 13, all-beta, Glycoside hydrolase, family 38, central domain, Glycoside hydrolase 38/57, N-terminal domain, Galactose mutarotase-like domain, Glycoside hydrolase family 38, N-terminal domain
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process | |
| GO:0006013 | IEA | InterPro | mannose metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0030246 | IEA | InterPro | carbohydrate binding | |
| GO:0004559 | IEA | InterPro | alpha-mannosidase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005618 | ISO | PLAZA Integrative Orthology | cell wall | AT5G13980 |
| GO:0048046 | ISO | PLAZA Integrative Orthology | apoplast | AT5G13980 |
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT3G26720 |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT3G26720 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR011013 | Galactose mutarotase-like domain superfamily |
| IPR011330 | Glycoside hydrolase/deacetylase, beta/alpha-barrel |
| IPR013780 | Glycosyl hydrolase, all-beta |
| IPR041147 | Glycosyl hydrolases family 38, C-terminal beta sandwich domain |
| IPR037094 | Glycoside hydrolase family 38, central domain superfamily |
| IPR000602 | Glycoside hydrolase family 38, N-terminal domain |
| IPR027291 | Glycoside hydrolase 38, N-terminal domain superfamily |
| IPR015341 | Glycoside hydrolase family 38, central domain |
| IPR011682 | Glycosyl hydrolase family 38, C-terminal |
| IPR028995 | Glycoside hydrolase families 57/38, central domain superfamily |
| Mapman id | Description |
|---|---|
| 50.3.2 | Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase |