Gene: AT3G26720

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G26720
  • Transcript Identifier AT3G26720.1
  • Gene Type Coding gene
  • Location Chr3 : 9816707-9823056 : positive

Gene Family Information

  • ID HOM05D000877
  • #Genes/#Species 679/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G26720.1
  • uniprot P94078

Descriptions

  • Description Glycosyl hydrolase family 38 protein
  • Computational description Glycosyl hydrolase family 38 protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: mannose metabolic process, carbohydrate metabolic process; LOCATED IN: plasma membrane, vacuole, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Glycoside hydrolase/deacetylase, beta/alpha-barrel (InterPro:IPR011330), Glycoside hydrolase, family 38, central domain (InterPro:IPR015341), Glycoside hydrolase, family 38, core (InterPro:IPR000602), Glycosyl hydrolases 38, C-terminal (InterPro:IPR011682); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 38 protein (TAIR:AT5G13980.2); Has 1103 Blast hits to 1053 proteins in 165 species: Archae - 7; Bacteria - 107; Metazoa - 691; Fungi - 10; Plants - 161; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
GOA Databasecarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0006013
IEA
Gene Ontologymannose metabolic process
GO:0006013
IEA
InterPromannose metabolic process
GO:0008152
IEA
GOA Databasemetabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030246
IEA
Gene Ontologycarbohydrate binding
GO:0030246
IEA
InterProcarbohydrate binding
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0004559
IDA
IBA
IEA
Gene Ontologyalpha-mannosidase activity1 2
GO:0004559
IEA
InterProalpha-mannosidase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0016798
IEA
GOA Databasehydrolase activity, acting on glycosyl bonds
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005774
IDA
GOA Databasevacuolar membrane
GO:0005774
IBA
Gene Ontologyvacuolar membrane2
GO:0005773
IDA
GOA Databasevacuole
GO:0005773
HDA
Gene Ontologyvacuole3
GO:0099503
HDA
Gene Ontologysecretory vesicle4
GO:0005829
RCA
Gene Ontologycytosol5
GO:0000325
HDA
Gene Ontologyplant-type vacuole6
GO:0009507
ISM
Gene Ontologychloroplast
GO:0005576
ISM
Gene Ontologyextracellular region

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000602 Glycoside hydrolase family 38, N-terminal domain
IPR037094 Glycoside hydrolase family 38, central domain superfamily
IPR041147 Glycosyl hydrolases family 38, C-terminal beta sandwich domain
IPR011682 Glycosyl hydrolase family 38, C-terminal
IPR028995 Glycoside hydrolase families 57/38, central domain superfamily
IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily
IPR015341 Glycoside hydrolase family 38, central domain
IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel
IPR013780 Glycosyl hydrolase, all-beta
IPR011013 Galactose mutarotase-like domain superfamily
Mapman id Description
50.3.2 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase