Gene: HPP92_005045

General Information

Structural Information

Species Vanilla planifolia
Gene Identifier HPP92_005045
Transcript Identifier Vpl02Ag05045.1
Gene Type Coding gene
Location CM028151.1 : 18172285-18178122 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000236
#Genes/#Species 1775/97
Phylogenetic origin

ID ORTHO05D000192
#Genes/#Species 1420/97
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

tid Vpl02Ag05045.1
pid KAG0491647.1

Descriptions

Short descriptions
Ortholog descriptions

Description AT hook motif DNA-binding family protein *-*

Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003680	IEA	InterPro	minor groove of adenine-thymine-rich DNA binding
GO:0003677	IEA	InterPro	DNA binding
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT1G63470
GO:0043621	ISO	PLAZA Integrative Orthology	protein self-association	AT1G63480

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT2G45850

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR005175	PPC domain
IPR039605	AT-hook motif nuclear-localized protein
IPR017956	AT hook, DNA-binding motif

Mapman id	Description
15.5.8.2	RNA biosynthesis.transcriptional regulation.AHL transcription factor superfamily.clade-B transcription factor (AHL)