Gene: AT1G63470

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G63470
  • Transcript Identifier AT1G63470.1
  • Gene Type Coding gene
  • Location Chr1 : 23536831-23538863 : negative

Gene Family Information

  • ID HOM05D000236
  • #Genes/#Species 1775/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G63470.1
  • Alias AHL5,AT-hook motif nuclear localized protein 5
  • uniprot Q8GXB3

Descriptions

  • Description AT hook motif DNA-binding family protein
  • Computational description AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT1G63480.1); Has 999 Blast hits to 995 proteins in 66 species: Archae - 0; Bacteria - 22; Metazoa - 171; Fungi - 26; Plants - 768; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003680
IEA
Gene Ontologyminor groove of adenine-thymine-rich DNA binding
GO:0003680
IEA
InterProminor groove of adenine-thymine-rich DNA binding
GO:0005515
IPI
Gene Ontologyprotein binding1
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0043621
ISO
PLAZA Integrative Orthologyprotein self-association AT1G63480

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005175 PPC domain
IPR039605 AT-hook motif nuclear-localized protein
IPR017956 AT hook, DNA-binding motif
Mapman id Description
15.5.8.2 RNA biosynthesis.transcriptional regulation.AHL transcription factor superfamily.clade-B transcription factor (AHL)