Gene: AT1G63480
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G63480
- Transcript Identifier AT1G63480.1
- Gene Type Coding gene
- Location Chr1 : 23539872-23541685 : negative
Gene Family Information
- ID HOM05D000236
- #Genes/#Species 1775/97
- Phylogenetic origin
- ID ORTHO05D000192
- #Genes/#Species 1420/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT1G63480.1
- Alias AHL12,AT-hook motif nuclear localized protein 12
- uniprot Q8LPN5
Descriptions
- Description AT hook motif DNA-binding family protein
- Computational description AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956), A.T hook-like (InterPro:IPR020478); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT1G63470.1); Has 860 Blast hits to 856 proteins in 70 species: Archae - 0; Bacteria - 8; Metazoa - 47; Fungi - 33; Plants - 756; Viruses - 1; Other Eukaryotes - 15 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003680 | IEA | Gene Ontology | minor groove of adenine-thymine-rich DNA binding | |
| GO:0003680 | IEA | InterPro | minor groove of adenine-thymine-rich DNA binding | |
| GO:0005515 | IPI | Gene Ontology | protein binding | 1 |
| GO:0043621 | IDA | Gene Ontology | protein self-association | 1 |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISM | Gene Ontology | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.8.2 | RNA biosynthesis.transcriptional regulation.AHL transcription factor superfamily.clade-B transcription factor (AHL) |