Gene: AT2G45850

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G45850
  • Transcript Identifier AT2G45850.3
  • Gene Type Coding gene
  • Location Chr2 : 18872181-18873457 : negative

Gene Family Information

  • ID HOM05D000236
  • #Genes/#Species 1775/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G45850.3
  • Alias AHL9,AT-hook motif nuclear localized protein 9
  • uniprot O80834

Descriptions

  • Description AT hook motif DNA-binding family protein
  • Computational description AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT3G61310.1); Has 793 Blast hits to 789 proteins in 47 species: Archae - 0; Bacteria - 4; Metazoa - 23; Fungi - 13; Plants - 747; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003680
IEA
Gene Ontologyminor groove of adenine-thymine-rich DNA binding
GO:0003680
IEA
InterProminor groove of adenine-thymine-rich DNA binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IDA
IEA
GOA Databasenucleus
GO:0005634
HDA
ISM
Gene Ontologynucleus1
GO:0005886
ISM
Gene Ontologyplasma membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005175 PPC domain
IPR017956 AT hook, DNA-binding motif
IPR039605 AT-hook motif nuclear-localized protein
Mapman id Description
15.5.8.2 RNA biosynthesis.transcriptional regulation.AHL transcription factor superfamily.clade-B transcription factor (AHL)