Gene: Duzib132G0515
General Information
Structural Information
- Species Durio zibethinus
- Gene Identifier Duzib132G0515
- Transcript Identifier Duzib132G0515.01
- Gene Type Coding gene
- Location NW_019167915.1 : 4568025-4570571 : negative
Gene Family Information
- ID HOM05D001181
- #Genes/#Species 527/99
- Phylogenetic origin
- ID ORTHO05D001678
- #Genes/#Species 371/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- name LOC111308977
- name XM_022907699.1
- pid XP_022763434.1
- id gene-LOC111308977
- uniprot A0A6P6AEZ5
Descriptions
- product D-3-phosphoglycerate dehydrogenase 1, chloroplastic-like
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009561 | ISO | PLAZA Integrative Orthology | megagametogenesis | AT4G34200 |
| GO:0000096 | ISO | PLAZA Integrative Orthology | sulfur amino acid metabolic process | AT4G34200 |
| GO:0009555 | ISO | PLAZA Integrative Orthology | pollen development | AT4G34200 |
| GO:0009643 | ISO | PLAZA Integrative Orthology | photosynthetic acclimation | AT3G19480 |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT4G34200 |
| GO:0008652 | IEA | GOA Database | cellular amino acid biosynthetic process | |
| GO:0006564 | IEA | GOA Database | L-serine biosynthetic process | |
| GO:0006564 | IEA | InterPro | L-serine biosynthetic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G17745 |
| GO:0003954 | ISO | PLAZA Integrative Orthology | NADH dehydrogenase activity | AT3G19480 |
| GO:0005524 | ISO | PLAZA Integrative Orthology | ATP binding | AT4G34200 |
| GO:0016616 | IEA | GOA Database | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | |
| GO:0016616 | IEA | InterPro | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | |
| GO:0016491 | IEA | GOA Database | oxidoreductase activity | |
| GO:0004617 | IEA | GOA Database | phosphoglycerate dehydrogenase activity | |
| GO:0004617 | IEA | InterPro | phosphoglycerate dehydrogenase activity | |
| GO:0051287 | IEA | GOA Database | NAD binding | |
| GO:0051287 | IEA | InterPro | NAD binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G17745 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT3G19480 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G19480 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G17745 |
| GO:0009536 | ISO | PLAZA Integrative Orthology | plastid | AT4G34200 |
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT3G19480 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR006139 | D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain |
| IPR002912 | ACT domain |
| IPR029009 | Allosteric substrate binding domain superfamily |
| IPR036291 | NAD(P)-binding domain superfamily |
| IPR015878 | S-adenosyl-L-homocysteine hydrolase, NAD binding domain |
| IPR006236 | D-3-phosphoglycerate dehydrogenase |
| IPR006140 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain |
| Mapman id | Description |
|---|---|
| 4.1.4.1.1 | Amino acid metabolism.biosynthesis.serine family.non-photorespiratory serine.phosphoglycerate dehydrogenase |