Gene: AT3G19480

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G19480
  • Transcript Identifier AT3G19480.1
  • Gene Type Coding gene
  • Location Chr3 : 6752590-6754650 : positive

Gene Family Information

  • ID HOM05D001181
  • #Genes/#Species 527/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G19480.1
  • Alias 3-PGDH,PGDH3,phosphoglycerate dehydrogenase 3
  • uniprot Q9LT69

Descriptions

  • Description D-3-phosphoglycerate dehydrogenase
  • Computational description D-3-phosphoglycerate dehydrogenase; FUNCTIONS IN: in 7 functions; INVOLVED IN: oxidation reduction, L-serine biosynthetic process, metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: D-3-phosphoglycerate dehydrogenase (InterPro:IPR006236), D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), D-3-phosphogylcerate Dehydrogenase (InterPro:IPR015508), Amino acid-binding ACT (InterPro:IPR002912), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT4G34200.1); Has 31099 Blast hits to 31093 proteins in 2807 species: Archae - 469; Bacteria - 19090; Metazoa - 735; Fungi - 1166; Plants - 566; Viruses - 5; Other Eukaryotes - 9068 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006564
IEA
Gene OntologyL-serine biosynthetic process
GO:0006564
IEA
InterProL-serine biosynthetic process
GO:0009643
IMP
Gene Ontologyphotosynthetic acclimation1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004617
IEA
GOA Databasephosphoglycerate dehydrogenase activity
GO:0004617
IBA
Gene Ontologyphosphoglycerate dehydrogenase activity2
GO:0004617
IEA
InterProphosphoglycerate dehydrogenase activity
GO:0016616
IEA
GOA Databaseoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0016616
IEA
InterProoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0051287
IEA
Gene OntologyNAD binding
GO:0051287
IEA
InterProNAD binding
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0003954
IDA
Gene OntologyNADH dehydrogenase activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009536
IEA
GOA Databaseplastid
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
ISM
Gene Ontologychloroplast3
GO:0005739
IDA
GOA Databasemitochondrion
GO:0005739
HDA
Gene Ontologymitochondrion4
GO:0009570
IDA, HDA
IBA
Gene Ontologychloroplast stroma1 2 5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029009 Allosteric substrate binding domain superfamily
IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain
IPR006236 D-3-phosphoglycerate dehydrogenase
IPR036291 NAD(P)-binding domain superfamily
IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
IPR002912 ACT domain
IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain
Mapman id Description
4.1.4.1.1 Amino acid metabolism.biosynthesis.serine family.non-photorespiratory serine.phosphoglycerate dehydrogenase