Gene: Cfa014311

General Information

Structural Information

  • Species Carpinus fangiana
  • Gene Identifier Cfa014311
  • Transcript Identifier Cfa014311.t1
  • Gene Type Coding gene
  • Location Cfa06 : 1541025-1558371 : negative

Gene Family Information

  • ID HOM05D004134
  • #Genes/#Species 171/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Cfa014311.t1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006364
IEA
InterProrRNA processing
GO:0051302
ISO
PLAZA Integrative Orthologyregulation of cell division AT2G40360
GO:0006306
ISO
PLAZA Integrative OrthologyDNA methylation AT2G32940
GO:0031047
ISO
PLAZA Integrative Orthologygene silencing by RNA Solyc07g049500.3
GO:0051607
ISO
PLAZA Integrative Orthologydefense response to virus AT2G32940
GO:0042254
ISO
PLAZA Homology (enrichment)ribosome biogenesis HOM05D004134
GO:0007276
ISO
PLAZA Integrative Orthologygamete generation AT2G40360
GO:0006342
ISO
PLAZA Integrative Orthologychromatin silencing AT2G32940
GO:0030422
ISO
PLAZA Integrative Orthologyproduction of siRNA involved in RNA interference AT2G32940

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
IEA
InterProprotein binding
GO:0035197
ISO
PLAZA Integrative OrthologysiRNA binding AT2G32940

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G32940
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT2G40360

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036397 Ribonuclease H superfamily
IPR001680 WD40 repeat
IPR003100 PAZ domain
IPR032472 Argonaute linker 2 domain
IPR036322 WD40-repeat-containing domain superfamily
IPR014811 Argonaute, linker 1 domain
IPR036085 PAZ domain superfamily
IPR012337 Ribonuclease H-like superfamily
IPR012953 BOP1, N-terminal domain
IPR003165 Piwi domain
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR032474 Protein argonaute, N-terminal
Mapman id Description
12.5.1.13 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.siRNA-integrating factor (AGO)
17.1.2.2.1.10.2 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.pre-60S ribosomal subunit nuclear assembly.PES-BOP1-WDR12 (PeBoW) complex.component BOP1