Gene: AT2G32940

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G32940
  • Transcript Identifier AT2G32940.1
  • Gene Type Coding gene
  • Location Chr2 : 13972218-13976856 : negative

Gene Family Information

  • ID HOM05D000234
  • #Genes/#Species 1784/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G32940.1
  • symbol AGO6
  • full_name ARGONAUTE 6
  • uniprot O48771

Descriptions

  • Description Argonaute family protein
  • Computational description ARGONAUTE 6 (AGO6); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Argonaute/Dicer protein, PAZ (InterPro:IPR003100); BEST Arabidopsis thaliana protein match is: Argonaute family protein (TAIR:AT5G21150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006306
IMP
Gene OntologyDNA methylation1
GO:0006342
IGI
Gene Ontologychromatin silencing1
GO:0030422
IMP
Gene Ontologyproduction of siRNA involved in RNA interference1
GO:0051607
IDA
Gene Ontologydefense response to virus2
GO:0006417
IEA
GOA Databaseregulation of translation
GO:0006952
IEA
GOA Databasedefense response
GO:0031047
IEA
GOA Databasegene silencing by RNA

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035197
IDA
Gene OntologysiRNA binding3
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003100 PAZ domain
IPR003165 Piwi domain
IPR032474 Protein argonaute, N-terminal
IPR014811 Argonaute, linker 1 domain
IPR012337 Ribonuclease H-like superfamily
IPR036397 Ribonuclease H superfamily
IPR032472 Argonaute linker 2 domain
IPR036085 PAZ domain superfamily
Mapman id Description
12.5.1.13 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.siRNA-integrating factor (AGO)