Gene: CBR_g40334
General Information
Structural Information
- Species Chara braunii
- Gene Identifier CBR_g40334
- Transcript Identifier GBG85606
- Gene Type Coding gene
- Location BFEA01000526 : 358777-409304 : positive
Gene Family Information
- ID HOM05D000019
- #Genes/#Species 6761/20
- Phylogenetic origin
- ID ORTHO05D000002
- #Genes/#Species 15655/89
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid GBG85606
- uniprot A0A388LTG3
Descriptions
- Description hypothetical protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030433 | IEA | GOA Database | ubiquitin-dependent ERAD pathway | |
| GO:0030433 | IEA | InterPro | ubiquitin-dependent ERAD pathway | |
| GO:0015074 | IEA | GOA Database | DNA integration | |
| GO:0015074 | IEA | InterPro | DNA integration |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR041577 | Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain |
| IPR043502 | DNA/RNA polymerase superfamily |
| IPR044623 | ERAD-associated E3 ubiquitin-protein ligase component HRD3 |
| IPR041588 | Integrase zinc-binding domain |
| IPR006597 | Sel1-like repeat |
| IPR000477 | Reverse transcriptase domain |
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR001584 | Integrase, catalytic core |
| IPR043128 | Reverse transcriptase/Diguanylate cyclase domain |
| IPR036397 | Ribonuclease H superfamily |
| IPR012337 | Ribonuclease H-like superfamily |
| Mapman id | Description |
|---|---|
| 19.2.4.2.1.3 | Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.ER-associated protein degradation (ERAD).HRD1 E3 ubiquitin ligase complex.adaptor protein component HRD3 |