Gene: CBR_g34600
General Information
Structural Information
- Species Chara braunii
- Gene Identifier CBR_g34600
- Transcript Identifier GBG82316
- Gene Type Coding gene
- Location BFEA01000403 : 244870-462729 : negative
Gene Family Information
- ID HOM05D000019
- #Genes/#Species 6761/20
- Phylogenetic origin
- ID ORTHO05D000048
- #Genes/#Species 2862/21
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid GBG82316
- uniprot A0A388LJ17
Descriptions
- Description hypothetical protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000724 | IEA | GOA Database | double-strand break repair via homologous recombination | |
| GO:0000724 | IEA | InterPro | double-strand break repair via homologous recombination | |
| GO:0051276 | IEA | GOA Database | chromosome organization | |
| GO:0051276 | IEA | InterPro | chromosome organization | |
| GO:0006974 | IEA | GOA Database | cellular response to DNA damage stimulus | |
| GO:0006281 | IEA | GOA Database | DNA repair | |
| GO:0006281 | IEA | InterPro | DNA repair |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0016887 | IEA | InterPro | ATP hydrolysis activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005694 | IEA | GOA Database | chromosome | |
| GO:0005694 | IEA | InterPro | chromosome | |
| GO:0030915 | IEA | GOA Database | Smc5-Smc6 complex | |
| GO:0030915 | IEA | InterPro | Smc5-Smc6 complex | |
| GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR043128 | Reverse transcriptase/Diguanylate cyclase domain |
| IPR027132 | Structural maintenance of chromosomes protein 6 |
| IPR043502 | DNA/RNA polymerase superfamily |
| IPR010935 | SMCs flexible hinge |
| IPR041577 | Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain |
| IPR003395 | RecF/RecN/SMC, N-terminal |
| IPR000477 | Reverse transcriptase domain |
| IPR036277 | SMCs flexible hinge superfamily |
| Mapman id | Description |
|---|---|
| 14.3.6.1.2 | DNA damage response.homologous recombination repair (HR).Smc5-Smc6 complex.NSE2-SMC5-SMC6 subcomplex.component SMC6 |