Gene: Ah.13g076880

General Information

Structural Information

  • Species Amaranthus hybridus
  • Gene Identifier Ah.13g076880
  • Transcript Identifier Ah.13g076880-v1.1.a1
  • Gene Type Coding gene
  • Location AmaHy_arrow1_Scaffold_13 : 20436770-20479686 : positive

Gene Family Information

  • ID HOM05D001433
  • #Genes/#Species 439/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Ah.13g076880-v1.1.a1

Descriptions

  • Description Ferredoxin-dependent glutamate synthase, chloroplastic (EC 1.4.7.1) (Fd-GOGAT) (SoFdGOGAT)
  • note Ferredoxin-dependent glutamate synthase, chloroplastic (EC 1.4.7.1) (Fd-GOGAT) (SoFdGOGAT)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009744
ISO
PLAZA Integrative Orthologyresponse to sucrose AT5G04140
GO:0009416
ISO
PLAZA Integrative Orthologyresponse to light stimulus AT5G04140
GO:0080114
ISO
PLAZA Integrative Orthologypositive regulation of glycine hydroxymethyltransferase activity AT5G04140
GO:0009853
ISO
PLAZA Integrative Orthologyphotorespiration AT5G04140
GO:0006261
IEA
InterProDNA-dependent DNA replication
GO:0006807
IEA
InterPronitrogen compound metabolic process
GO:0006260
IEA
InterProDNA replication
GO:0006537
IEA
InterProglutamate biosynthetic process
GO:0006139
IEA
InterPronucleobase-containing compound metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G04140
GO:0016041
ISO
PLAZA Integrative Orthologyglutamate synthase (ferredoxin) activity AT5G04140
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G04140
GO:0016491
IEA
InterProoxidoreductase activity
GO:0003824
IEA
InterProcatalytic activity
GO:0003887
IEA
InterProDNA-directed DNA polymerase activity
GO:0003677
IEA
InterProDNA binding
GO:0016638
IEA
InterProoxidoreductase activity, acting on the CH-NH2 group of donors
GO:0015930
IEA
InterProglutamate synthase activity
GO:0008408
IEA
InterPro3'-5' exonuclease activity
GO:0003676
IEA
InterPronucleic acid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT5G04140
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT5G04140
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT5G04140
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G04140
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT2G41220
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT5G04140

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002489 Glutamate synthase, alpha subunit, C-terminal
IPR002562 3'-5' exonuclease domain
IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily
IPR002932 Glutamate synthase domain
IPR001098 DNA-directed DNA polymerase, family A, palm domain
IPR036397 Ribonuclease H superfamily
IPR006982 Glutamate synthase, central-N
IPR029055 Nucleophile aminohydrolases, N-terminal
IPR012337 Ribonuclease H-like superfamily
IPR043502 DNA/RNA polymerase superfamily
IPR017932 Glutamine amidotransferase type 2 domain
IPR013785 Aldolase-type TIM barrel
IPR002298 DNA polymerase A
Mapman id Description
13.5.1 Cell cycle organisation.organellar DNA replication.DNA polymerase (POP)