Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
TAR626G0719 group3 + View
TAR636G1173 group1 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G3120 LG-8 - View
Aethionema arabicum Aa31LG10G2540 LG-10 - View
Acer truncatum Atru.chr1.3248 chr1 - View
Actinidia chinensis Actinidia32764 Lachesis_group27 - View
Actinidia chinensis Actinidia08971 Lachesis_group2 + View
Arabidopsis lyrata AL1G60630 scaffold_1 + View
Arabidopsis lyrata AL3G28620 scaffold_3 - View
Avicennia marina MSTRG.22695 ScioBoG_3703_HRSCAF_3719 + View
Amaranthus hybridus Ah.01g021220 AmaHy_arrow1_Scaffold_1 + View
Aquilegia oxysepala Aqoxy7G01805 CHR07 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.63P8XR K15304 - Ran-binding protein 3 (RANBP3) arahy.Tifrunner.gnm1.Arahy.18 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.HH7TIC PF08911 - NUP50 (Nucleoporin 50 kDa) (NUP50) arahy.Tifrunner.gnm1.Arahy.09 - View
Arabidopsis thaliana AT1G52380 NUP50 (Nucleoporin 50 kDa) protein NUP50 (Nucleoporin 50 kDa) protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: intracellular transport%3B LOCATED IN: cytosol%2C nucleus%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ran binding protein 1 (InterPro:IPR000156)%2C Pleckstrin homology-type (InterPro:IPR011993)%2C Nuclear pore complex%2C NUP2/50/61 (InterPro:IPR015007)%3B BEST Arabidopsis thaliana protein match is: NUP50 (Nucleoporin 50 kDa) protein (TAIR:AT3G15970.1)%3B Has 1614 Blast hits to 1303 proteins in 238 species: Archae - 0%3B Bacteria - 48%3B Metazoa - 835%3B Fungi - 410%3B Plants - 179%3B Viruses - 3%3B Other Eukaryotes - 139 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT3G15970 NUP50 (Nucleoporin 50 kDa) protein NUP50 (Nucleoporin 50 kDa) protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: intracellular transport%3B LOCATED IN: nuclear pore%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ran binding protein 1 (InterPro:IPR000156)%2C Pleckstrin homology-type (InterPro:IPR011993)%2C Nuclear pore complex%2C NUP2/50/61 (InterPro:IPR015007)%3B BEST Arabidopsis thaliana protein match is: NUP50 (Nucleoporin 50 kDa) protein (TAIR:AT1G52380.1)%3B Has 4078 Blast hits to 2719 proteins in 441 species: Archae - 18%3B Bacteria - 1103%3B Metazoa - 1379%3B Fungi - 710%3B Plants - 228%3B Viruses - 8%3B Other Eukaryotes - 632 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaC08g43991 ChrC08 + View
Brassica carinata BcaB02g10997 ChrB02 - View
Brassica napus C06p07830 C06 + View
Brassica napus A06p01830 A06 - View
Brassica napus C06p13960 C06 + View
Brassica oleracea BolC6t35869H C6 + View
Brassica rapa BraA06t23400Z A06 - View
Beta vulgaris EL10Ac9g21982 K15304 - Ran-binding protein 3 (RANBP3) Chr9_EL10_PGA_scaffold8 + View
Camellia sinensis var. sinensis CSS0004276 PREDICTED: RANBP2-like and GRIP domain-containing protein 5/6-like isoform X1 [Citrus sinensis] Chr15 + View
Capsicum annuum CAN.G395.16 PGAv.1.6.scaffold395 + View
Capsicum annuum CAN.G438.59 PGAv.1.6.scaffold438 - View
Cannabis sativa CANSAT56G2173 NC_044371.1 + View
Cicer arietinum L. Ca_20399_v3 Ca_LG6_v3 + View
Corylus avellana Haze_16447 Similar to NUP50A: Nuclear pore complex protein NUP50A (Arabidopsis thaliana OX%3D3702) 11 + View
Coffea canephora Cc04_g03530 Putative NUP50 (Nucleoporin 50 kDa) protein chr4 + View
Citrus clementina Ciclev10025626m.g scaffold_7 + View
Carpinus fangiana Cfa002057 Cfa01 - View
Cardamine hirsuta CARHR091100 Ran-binding protein 1 domain-containing protein Chr3 - View
Cardamine hirsuta CARHR042530 Ran-binding protein 1 domain-containing protein Chr1 + View
Carya illinoinensis CiPaw.01G240200 K15304 - Ran-binding protein 3 (RANBP3) Chr01 + View
Carya illinoinensis CiPaw.02G151900 K15304 - Ran-binding protein 3 (RANBP3) Chr02 + View
Citrullus lanatus ClCG09G002210 Ran-binding protein 1 domain-containing CG_Chr09 + View
Cucumis melo MELO3C024224.2 nuclear pore complex protein NUP50A isoform X1 chr01 - View
Chenopodium quinoa AUR62016436 NUP50A: Nuclear pore complex protein NUP50A C_Quinoa_Scaffold_3514 - View
Chenopodium quinoa AUR62011621 NUP50A: Nuclear pore complex protein NUP50A C_Quinoa_Scaffold_3333 - View
Capsella rubella Carub.0001s4138 K15304 - Ran-binding protein 3 (RANBP3) scaffold_1 + View
Capsella rubella Carub.0003s1570 K15304 - Ran-binding protein 3 (RANBP3) scaffold_3 - View
Cucumis sativus L. CsaV3_7G033090 nuclear pore complex protein NUP50A-like chr7 - View
Daucus carota DCAR_026310 hypothetical protein DCARv2_Chr7 - View
Davidia involucrata Dinv30518 GWHABJS00000019 - View
Davidia involucrata Dinv38052 GWHABJS00000006 + View
Durio zibethinus Duzib160G0939 NW_019168015.1 - View
Durio zibethinus Duzib192G0576 NW_019168037.1 - View
Erigeron canadensis ECA247G1970 Conyza_canadensis_scaffold:7 - View
Erythranthe guttata Migut.I00858 scaffold_9 - View
Eutrema salsugineum Thhalv10020773m.g K15304 - Ran-binding protein 3 (RANBP3) scaffold_13 + View
Fragaria x ananassa FAN02G1452 K15304 - Ran-binding protein 3 (RANBP3) Fvb6-4 - View
Fragaria vesca FvH4_6g31000 K15304 - Ran-binding protein 3 (RANBP3) Fvb6 - View
Gossypium hirsutum Gohir.A02G122200 K15304 - Ran-binding protein 3 (RANBP3) A02 + View
Gossypium hirsutum Gohir.D03G074300 K15304 - Ran-binding protein 3 (RANBP3) D03 - View
Glycine max Glyma.13G360300 K15304 - Ran-binding protein 3 (RANBP3) Gm13 + View
Glycine max Glyma.15G013600 K15304 - Ran-binding protein 3 (RANBP3) Gm15 - View
Gossypium raimondii Gorai.002G058700 Chr02 - View
Hydrangea macrophylla Hma1.2p1_0682F.1_g202710 Hma1.2p1_0682F.1 - View
Lupinus albus Lalb_Chr22g0351201 KOG0866 - Ran-binding protein RANBP3 Lalb_Chr22 - View
Lupinus albus Lalb_Chr24g0395791 K15304 - Ran-binding protein 3 (RANBP3) Lalb_Chr24 - View
Lupinus albus Lalb_Chr14g0373481 K15304 - Ran-binding protein 3 (RANBP3) Lalb_Chr14 + View
Lotus japonicus Lj3g0018129 K15304 - Ran-binding protein 3 (RANBP3) chr3 + View
Lonicera japonica Lj9P507T43 GWHAAZE00000009 - View
Lonicera japonica Lj5C61T11 GWHAAZE00000005 + View
Magnolia biondii MBI01_g16632_MAGBIO AED:0.07 Chr01 + View
Magnolia biondii MBI04_g18158_MAGBIO AED:0.06 Chr04 - View
Malus domestica MD17G1196800 NUP50 (Nucleoporin 50 kDa) protein Chr17 + View
Malus domestica MD09G1214400 NUP50 (Nucleoporin 50 kDa) protein Chr09 + View
Manihot esculenta Manes.11G048200 Chromosome11 + View
Manihot esculenta Manes.04G122500 Chromosome04 - View
Medicago truncatula Medtr4g011930 nucleoporin 50 Ran-binding domain protein, putative chr4 - View
Nelumbo nucifera Nn2g11803 chr2 + View
Nelumbo nucifera Nn8g39239 chr8 + View
Nicotiana tabacum Nitab4.5_0000351g0150 Ran binding domain, Pleckstrin homology-like domain, Nuclear pore complex, NUP2/50/61 Nitab4.5_0000351 + View
Nicotiana tabacum Nitab4.5_0000671g0020 Ran binding domain, Nuclear pore complex, NUP2/50/61, Pleckstrin homology-like domain Nitab4.5_0000671 - View
Olea europaea Oeu033481.1 chr1 - View
Petunia axillaris Peaxi162Scf00015g10039 nuclear pore complex protein Nup50a [Nicotiana benthamiana] Peaxi162Scf00015 - View
Prunus persica Prupe.3G072500 K15304 - Ran-binding protein 3 (RANBP3) Pp03 + View
Pisum sativum Psat7g253000 RanBP1 domain chr7LG7 + View
Papaver somniferum PSO782G4639 NC_039365.1 - View
Papaver somniferum PSO063G3399 NC_039364.1 - View
Populus trichocarpa Potri.001G179100 K15304 - Ran-binding protein 3 (RANBP3) Chr01 - View
Populus trichocarpa Potri.003G056400 PTHR23138//PTHR23138:SF99 - RAN BINDING PROTEIN // PROTEIN RAN-5 Chr03 + View
Phaseolus vulgaris Phvul.005G172100 K15304 - Ran-binding protein 3 (RANBP3) Chr05 + View
Quercus lobata QL05p024883 5 + View
Rosa chinensis RcHm_v2.0_Chr2g0137631 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim08G0220400 chr08 - View
Rhododendron simsii Rhsim12G0197200 chr12 - View
Striga asiatica SGA_v2.0_scaffold5G02599 scaffold5 + View
Salvia bowleyana SalBow2G1612 GWHASIU00000007 + View
Salix brachista Sabra01G0147800 GWHAAZH00000001 + View
Salix brachista Sabra03G0031800 GWHAAZH00000003 + View
Sechium edule Sed0010123 LG09 - View
Sechium edule Sed0003438 LG07 + View
Solanum lycopersicum Solyc06g066740.3 Nuclear pore complex protein NUP50A (AHRD V3.3 *** A0A2G3C8N3_CAPCH) SL4.0ch06 + View
Solanum lycopersicum Solyc03g120280.1 Nuclear pore complex protein NUP50A (AHRD V3.3 *** A0A2G2WQ64_CAPBA) SL4.0ch03 + View
Schrenkiella parvula Sp3g14320 K15304 - Ran-binding protein 3 (RANBP3) ch3-1 - View
Solanum pennellii Sopen06g025020 NUP50 (Nucleoporin 50 kDa) protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: intracellular transport | LOCATED IN: cytosol, nucleus | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ran binding protein 1 , Pleckstrin homology-type , Nuclear pore complex, NUP2/50/61 | BEST Arabidopsis thaliana protein match is: NUP50 (Nucleoporin 50 kDa) protein Spenn-ch06 + View
Solanum pennellii Sopen03g039170 NUP50 (Nucleoporin 50 kDa) protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: intracellular transport | LOCATED IN: cytosol, nucleus | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ran binding protein 1 , Pleckstrin homology-type , Nuclear pore complex, NUP2/50/61 | BEST Arabidopsis thaliana protein match is: NUP50 (Nucleoporin 50 kDa) protein Spenn-ch03 + View
Solanum tuberosum PGSC0003DMG400002641 Ran-binding protein ST4.03ch03 + View
Solanum tuberosum PGSC0003DMG400016510 Ran-binding protein ST4.03ch06 + View
Theobroma cacao Thecc.06G085100 NUP50 protein Chromosome_6 - View
Tarenaya hassleriana THA.LOC104818004 nuclear pore complex protein NUP50A NW_010966021.1 + View
Trifolium pratense TPR.G24152 Tp57577_TGAC_v2_LG4 + View
Tripterygium wilfordii TWI18G1146 NC_052241.1 + View
Tripterygium wilfordii TWI75G1291 NC_052253.1 + View
Vaccinium macrocarpon vmacro18921 Similar to NUP50B: Nuclear pore complex protein NUP50B (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1080G0623 CM024079.1 - View
Vitis vinifera GSVIVG01017123001 chr9 + View