Gene: vmacro18921

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro18921
  • Transcript Identifier vmacro18921-RA
  • Gene Type Coding gene
  • Location chr5_Vaccinium_macrocarpon_Stevens_v1 : 2390244-2391437 : positive

Gene Family Information

  • ID HOM05D003909
  • #Genes/#Species 178/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro18921_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to NUP50B: Nuclear pore complex protein NUP50B (Arabidopsis thaliana OX=3702)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046907
IEA
InterProintracellular transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G52380

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005643
IEA
InterPronuclear pore
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G52380
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G52380

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015007 Nuclear pore complex, NUP2/50/61
IPR000156 Ran binding domain
IPR011993 PH-like domain superfamily
Mapman id Description
23.5.1.1.5.1 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.nucleoporin (NUP50)